RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 SLURP1P55000 103 aa8.45□□□□□ -1.06
NUP54-209ENST00000510569 DLX2Q07687 328 aaPredicted RBP8.45□□□□□ -1.06
NUP54-209ENST00000510569 CYP4F3Q08477 520 aa8.45□□□□□ -1.06
NUP54-209ENST00000510569 LCE5AQ5TCM9 118 aa8.45□□□□□ -1.06
NUP54-209ENST00000510569 LIPIQ6XZB0 460 aa8.45□□□□□ -1.06
NUP54-209ENST00000510569 FRMD5Q7Z6J6 570 aa8.45□□□□□ -1.06
NUP54-209ENST00000510569 PLEKHO2Q8TD55 490 aa8.45□□□□□ -1.06
NUP54-209ENST00000510569 TEPSINQ96N21 525 aa8.45□□□□□ -1.06
NUP54-209ENST00000510569 KRTAP4-11Q9BYQ6 195 aa8.45□□□□□ -1.06
NUP54-209ENST00000510569 NKX2-4Q9H2Z4 354 aa8.45□□□□□ -1.06
NUP54-209ENST00000510569 CAPN10Q9HC96 672 aa8.45□□□□□ -1.06
NUP54-209ENST00000510569 CYP26B1Q9NR63 512 aa8.45□□□□□ -1.06
NUP54-209ENST00000510569 NOP56O00567 594 aaKnown RBP8.44□□□□□ -1.06
NUP54-209ENST00000510569 SMAD7O15105 426 aaKnown RBP8.44□□□□□ -1.06
NUP54-209ENST00000510569 THBDP07204 575 aa8.44□□□□□ -1.06
NUP54-209ENST00000510569 TNNI3KQ59H18 835 aa8.44□□□□□ -1.06
NUP54-209ENST00000510569 NPLOC4Q8TAT6 608 aa8.44□□□□□ -1.06
NUP54-209ENST00000510569 DPF3Q92784 378 aa8.44□□□□□ -1.06
NUP54-209ENST00000510569 BCAS3Q9H6U6 928 aa8.44□□□□□ -1.06
NUP54-209ENST00000510569 GPRC5CQ9NQ84 441 aa8.44□□□□□ -1.06
NUP54-209ENST00000510569 C6orf15Q6UXA7 325 aaPredicted RBP8.43□□□□□ -1.06
NUP54-209ENST00000510569 ACTR10Q9NZ32 417 aa8.43□□□□□ -1.06
NUP54-209ENST00000510569 ERCC5P28715 1186 aaPredicted RBP8.42□□□□□ -1.06
NUP54-209ENST00000510569 KCNC1P48547 511 aa8.42□□□□□ -1.06
NUP54-209ENST00000510569 CACNB2Q08289 660 aaPredicted RBP8.42□□□□□ -1.06
NUP54-209ENST00000510569 DCP2Q8IU60 420 aaKnown RBP8.42□□□□□ -1.06
NUP54-209ENST00000510569 ZDHHC14Q8IZN3 488 aa8.42□□□□□ -1.06
NUP54-209ENST00000510569 USP33Q8TEY7 942 aa8.42□□□□□ -1.06
NUP54-209ENST00000510569 FRS2Q8WU20 508 aa8.42□□□□□ -1.06
NUP54-209ENST00000510569 FUCA1P04066 466 aa8.41□□□□□ -1.06
NUP54-209ENST00000510569 NTRK1P04629 796 aa8.41□□□□□ -1.06
NUP54-209ENST00000510569 INF2Q27J81 1249 aa8.41□□□□□ -1.06
NUP54-209ENST00000510569 E4F1Q66K89 784 aaPredicted RBP8.41□□□□□ -1.06
NUP54-209ENST00000510569 FAM178BQ8IXR5 827 aa8.41□□□□□ -1.06
NUP54-209ENST00000510569 Q8N1Y9 231 aa8.41□□□□□ -1.06
NUP54-209ENST00000510569 SMARCC2Q8TAQ2 1214 aa8.41□□□□□ -1.06
NUP54-209ENST00000510569 LGR4Q9BXB1 951 aa8.41□□□□□ -1.06
NUP54-209ENST00000510569 ADAM7Q9H2U9 754 aa8.41□□□□□ -1.06
NUP54-209ENST00000510569 PRKAG3Q9UGI9 489 aa8.41□□□□□ -1.06
NUP54-209ENST00000510569 MRVI1Q9Y6F6 885 aa8.41□□□□□ -1.06
NUP54-209ENST00000510569 SCG5P05408 212 aa8.4□□□□□ -1.06
NUP54-209ENST00000510569 ZNF227Q86WZ6 799 aa8.4□□□□□ -1.06
NUP54-209ENST00000510569 VPS37DQ86XT2 251 aa8.4□□□□□ -1.06
NUP54-209ENST00000510569 ADGRG2Q8IZP9 1017 aa8.4□□□□□ -1.06
NUP54-209ENST00000510569 ZNF526Q8TF50 670 aaPredicted RBP8.4□□□□□ -1.06
NUP54-209ENST00000510569 PPP1R14AQ96A00 147 aa8.4□□□□□ -1.06
NUP54-209ENST00000510569 MARCH2Q9P0N8 246 aa8.4□□□□□ -1.06
NUP54-209ENST00000510569 SIT1Q9Y3P8 196 aa8.4□□□□□ -1.06
NUP54-209ENST00000510569 A0A1B0GTL3 188 aa8.39□□□□□ -1.07
NUP54-209ENST00000510569 B2RBV5 119 aa8.39□□□□□ -1.07
NUP54-209ENST00000510569 TBX1O43435 398 aa8.39□□□□□ -1.07
NUP54-209ENST00000510569 SUSD5O60279 629 aa8.39□□□□□ -1.07
NUP54-209ENST00000510569 SSBP05455 408 aaKnown RBP eCLIP8.39□□□□□ -1.07
NUP54-209ENST00000510569 TESK1Q15569 626 aa8.39□□□□□ -1.07
NUP54-209ENST00000510569 SKOR2Q2VWA4 1001 aaPredicted RBP8.39□□□□□ -1.07
NUP54-209ENST00000510569 LARP1BQ659C4 914 aaKnown RBP8.39□□□□□ -1.07
NUP54-209ENST00000510569 IQCEQ6IPM2 695 aa8.39□□□□□ -1.07
NUP54-209ENST00000510569 BTN2A2Q8WVV5 523 aa8.39□□□□□ -1.07
NUP54-209ENST00000510569 NOX5Q96PH1 765 aa8.39□□□□□ -1.07
NUP54-209ENST00000510569 ITGAVP06756 1048 aa8.38□□□□□ -1.07
NUP54-209ENST00000510569 FGRP09769 529 aa8.38□□□□□ -1.07
NUP54-209ENST00000510569 TCF3P15923 654 aa8.38□□□□□ -1.07
NUP54-209ENST00000510569 HOXC12P31275 282 aa8.38□□□□□ -1.07
NUP54-209ENST00000510569 SLC6A11P48066 632 aa8.38□□□□□ -1.07
NUP54-209ENST00000510569 ERICH6BQ5W0A0 696 aa8.38□□□□□ -1.07
NUP54-209ENST00000510569 MRM1Q6IN84 353 aaKnown RBP8.38□□□□□ -1.07
NUP54-209ENST00000510569 MIB1Q86YT6 1006 aa8.38□□□□□ -1.07
NUP54-209ENST00000510569 RIOX2Q8IUF8 465 aa8.38□□□□□ -1.07
NUP54-209ENST00000510569 TEX2Q8IWB9 1127 aa8.38□□□□□ -1.07
NUP54-209ENST00000510569 CARFQ8N187 725 aa8.38□□□□□ -1.07
NUP54-209ENST00000510569 LINC00482Q8N8I6 264 aa8.38□□□□□ -1.07
NUP54-209ENST00000510569 SPATA25Q9BR10 227 aa8.38□□□□□ -1.07
NUP54-209ENST00000510569 C8BP07358 591 aa8.37□□□□□ -1.07
NUP54-209ENST00000510569 KCNAB2Q13303 367 aa8.37□□□□□ -1.07
NUP54-209ENST00000510569 ZFYVE27Q5T4F4 411 aa8.37□□□□□ -1.07
NUP54-209ENST00000510569 ACBD5Q5T8D3 534 aaPredicted RBP8.37□□□□□ -1.07
NUP54-209ENST00000510569 CCDC103Q8IW40 242 aa8.37□□□□□ -1.07
NUP54-209ENST00000510569 SEC14L1Q92503 715 aa8.37□□□□□ -1.07
NUP54-209ENST00000510569 AP5M1Q9H0R1 490 aa8.37□□□□□ -1.07
NUP54-209ENST00000510569 C22orf46C9J442 243 aa8.36□□□□□ -1.07
NUP54-209ENST00000510569 ARNTLO00327 626 aa8.36□□□□□ -1.07
NUP54-209ENST00000510569 CELA3BP08861 270 aa8.36□□□□□ -1.07
NUP54-209ENST00000510569 CYP2C8P10632 490 aa8.36□□□□□ -1.07
NUP54-209ENST00000510569 ETFBP38117 255 aa8.36□□□□□ -1.07
NUP54-209ENST00000510569 RPL11P62913 178 aaKnown RBP8.36□□□□□ -1.07
NUP54-209ENST00000510569 GNL2Q13823 731 aaKnown RBP8.36□□□□□ -1.07
NUP54-209ENST00000510569 NLRP10Q86W26 655 aa8.36□□□□□ -1.07
NUP54-209ENST00000510569 KREMEN2Q8NCW0 462 aa8.36□□□□□ -1.07
NUP54-209ENST00000510569 TINF2Q9BSI4 451 aa8.36□□□□□ -1.07
NUP54-209ENST00000510569 SPATA6Q9NWH7 488 aaPredicted RBP8.36□□□□□ -1.07
NUP54-209ENST00000510569 TIMM13Q9Y5L4 95 aaPredicted RBP8.36□□□□□ -1.07
NUP54-209ENST00000510569 X6R8D5 127 aa8.36□□□□□ -1.07
NUP54-209ENST00000510569 SGSM2O43147 1006 aa8.35□□□□□ -1.07
NUP54-209ENST00000510569 CPP00450 1065 aa8.35□□□□□ -1.07
NUP54-209ENST00000510569 CAPNS1P04632 268 aa8.35□□□□□ -1.07
NUP54-209ENST00000510569 FPR2P25090 351 aa8.35□□□□□ -1.07
NUP54-209ENST00000510569 FXNQ16595 210 aa8.35□□□□□ -1.07
NUP54-209ENST00000510569 SV2CQ496J9 727 aa8.35□□□□□ -1.07
NUP54-209ENST00000510569 MROH9Q5TGP6 573 aa8.35□□□□□ -1.07
NUP54-209ENST00000510569 ETV3LQ6ZN32 361 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms