RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 CTGFP29279 349 aa23.25■■□□□ 1.31
CDC42SE2-206ENST00000503291 DNM1Q05193 864 aaKnown RBP23.25■■□□□ 1.31
CDC42SE2-206ENST00000503291 GRB14Q14449 540 aa23.25■■□□□ 1.31
CDC42SE2-206ENST00000503291 ARHGEF16Q5VV41 709 aa23.25■■□□□ 1.31
CDC42SE2-206ENST00000503291 NEK8Q86SG6 692 aa23.25■■□□□ 1.31
CDC42SE2-206ENST00000503291 EHMT1Q9H9B1 1298 aa23.25■■□□□ 1.31
CDC42SE2-206ENST00000503291 PXMP2Q9NR77 195 aa23.25■■□□□ 1.31
CDC42SE2-206ENST00000503291 PLXNB2O15031 1838 aa23.25■■□□□ 1.31
CDC42SE2-206ENST00000503291 RPTORQ8N122 1335 aa23.25■■□□□ 1.31
CDC42SE2-206ENST00000503291 EIF2AK2P19525 551 aaKnown RBP23.25■■□□□ 1.31
CDC42SE2-206ENST00000503291 TRAPPC10P48553 1259 aa23.25■■□□□ 1.31
CDC42SE2-206ENST00000503291 ARHGAP4P98171 946 aa23.25■■□□□ 1.31
CDC42SE2-206ENST00000503291 NSUN6Q8TEA1 469 aaKnown RBP23.25■■□□□ 1.31
CDC42SE2-206ENST00000503291 SLC15A5A6NIM6 579 aa23.24■■□□□ 1.31
CDC42SE2-206ENST00000503291 GPR25O00155 361 aa23.24■■□□□ 1.31
CDC42SE2-206ENST00000503291 WNT7AO00755 349 aa23.24■■□□□ 1.31
CDC42SE2-206ENST00000503291 PSMC4P43686 418 aa23.24■■□□□ 1.31
CDC42SE2-206ENST00000503291 NBR1Q14596 966 aa23.24■■□□□ 1.31
CDC42SE2-206ENST00000503291 LETM2Q2VYF4 491 aa23.24■■□□□ 1.31
CDC42SE2-206ENST00000503291 DNERQ8NFT8 737 aa23.24■■□□□ 1.31
CDC42SE2-206ENST00000503291 WBP1LQ9NX94 342 aa23.24■■□□□ 1.31
CDC42SE2-206ENST00000503291 TFIP11Q9UBB9 837 aaKnown RBP23.24■■□□□ 1.31
CDC42SE2-206ENST00000503291 MYH7BA7E2Y1 1941 aa23.24■■□□□ 1.31
CDC42SE2-206ENST00000503291 ASTN1O14525 1302 aa23.24■■□□□ 1.31
CDC42SE2-206ENST00000503291 FRMPD4Q14CM0 1322 aa23.24■■□□□ 1.31
CDC42SE2-206ENST00000503291 SOWAHBA6NEL2 793 aa23.23■■□□□ 1.31
CDC42SE2-206ENST00000503291 TNPO2O14787 897 aaKnown RBP23.23■■□□□ 1.31
CDC42SE2-206ENST00000503291 COBLO75128 1261 aa23.23■■□□□ 1.31
CDC42SE2-206ENST00000503291 USP11P51784 963 aa23.23■■□□□ 1.31
CDC42SE2-206ENST00000503291 ZNF396Q96N95 335 aaPredicted RBP23.23■■□□□ 1.31
CDC42SE2-206ENST00000503291 PDCD2LQ9BRP1 358 aa23.23■■□□□ 1.31
CDC42SE2-206ENST00000503291 ARHGAP39Q9C0H5 1083 aa23.23■■□□□ 1.31
CDC42SE2-206ENST00000503291 ADD3Q9UEY8 706 aaKnown RBP23.23■■□□□ 1.31
CDC42SE2-206ENST00000503291 DOCK3Q8IZD9 2030 aa23.23■■□□□ 1.31
CDC42SE2-206ENST00000503291 FCGRTP55899 365 aa23.23■■□□□ 1.31
CDC42SE2-206ENST00000503291 PGM5Q15124 567 aa23.23■■□□□ 1.31
CDC42SE2-206ENST00000503291 MORN1Q5T089 497 aa23.23■■□□□ 1.31
CDC42SE2-206ENST00000503291 DPP9Q86TI2 863 aa23.23■■□□□ 1.31
CDC42SE2-206ENST00000503291 USP28Q96RU2 1077 aa23.23■■□□□ 1.31
CDC42SE2-206ENST00000503291 FTOQ9C0B1 505 aaKnown RBP eCLIP23.23■■□□□ 1.31
CDC42SE2-206ENST00000503291 PCDHB6Q9Y5E3 794 aa23.23■■□□□ 1.31
CDC42SE2-206ENST00000503291 LCTP09848 1927 aa23.22■■□□□ 1.31
CDC42SE2-206ENST00000503291 TTC38Q5R3I4 469 aa23.22■■□□□ 1.31
CDC42SE2-206ENST00000503291 IL31RAQ8NI17 732 aa23.22■■□□□ 1.31
CDC42SE2-206ENST00000503291 TRIM47Q96LD4 638 aa23.22■■□□□ 1.31
CDC42SE2-206ENST00000503291 CCNT1O60563 726 aaKnown RBP23.21■■□□□ 1.31
CDC42SE2-206ENST00000503291 CYP3A4P08684 503 aa23.21■■□□□ 1.31
CDC42SE2-206ENST00000503291 ALDH5A1P51649 535 aaPredicted RBP23.21■■□□□ 1.31
CDC42SE2-206ENST00000503291 CEBPZQ03701 1054 aaKnown RBP23.21■■□□□ 1.31
CDC42SE2-206ENST00000503291 KIF22Q14807 665 aa23.21■■□□□ 1.31
CDC42SE2-206ENST00000503291 ZNF174Q15697 407 aa23.21■■□□□ 1.31
CDC42SE2-206ENST00000503291 ZNF792Q3KQV3 632 aa23.21■■□□□ 1.31
CDC42SE2-206ENST00000503291 FGD4Q96M96 766 aa23.21■■□□□ 1.31
CDC42SE2-206ENST00000503291 TSKSQ9UJT2 592 aa23.21■■□□□ 1.31
CDC42SE2-206ENST00000503291 NR3C2P08235 984 aa23.21■■□□□ 1.31
CDC42SE2-206ENST00000503291 ATL3Q6DD88 541 aa23.21■■□□□ 1.31
CDC42SE2-206ENST00000503291 GJD2Q9UKL4 321 aa23.21■■□□□ 1.31
CDC42SE2-206ENST00000503291 CLIC4Q9Y696 253 aa23.21■■□□□ 1.31
CDC42SE2-206ENST00000503291 MYH15Q9Y2K3 1946 aa23.2■■□□□ 1.31
CDC42SE2-206ENST00000503291 MCM7P33993 719 aa23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 CAP1Q01518 475 aa23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 MAP2K5Q13163 448 aa23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 PCNX4Q63HM2 1172 aa23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 VSIG10LQ86VR7 867 aa23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 ZFP91Q96JP5 570 aaPredicted RBP23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 IWS1Q96ST2 819 aa23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 NUDT12Q9BQG2 462 aa23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 CFAP45Q9UL16 551 aa23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 DDX49Q9Y6V7 483 aaKnown RBP23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 MGAMO43451 1857 aa23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 TDP2O95551 362 aa23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 MYCLP12524 364 aaPredicted RBP23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 NCLP19338 710 aaKnown RBP23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 KRT85P78386 507 aa23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 SF3A1Q15459 793 aaKnown RBP23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 ANO1Q5XXA6 986 aa23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 PPP4R3AQ6IN85 833 aa23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.2■■□□□ 1.3
CDC42SE2-206ENST00000503291 TCHHQ07283 1943 aa23.19■■□□□ 1.3
CDC42SE2-206ENST00000503291 CIITAP33076 1130 aa23.19■■□□□ 1.3
CDC42SE2-206ENST00000503291 ZNF76P36508 570 aa23.19■■□□□ 1.3
CDC42SE2-206ENST00000503291 MRPS9P82933 396 aaKnown RBP23.19■■□□□ 1.3
CDC42SE2-206ENST00000503291 ZNF296Q8WUU4 475 aaPredicted RBP23.19■■□□□ 1.3
CDC42SE2-206ENST00000503291 USP6NLQ92738 828 aa23.19■■□□□ 1.3
CDC42SE2-206ENST00000503291 SLC5A4Q9NY91 659 aa23.19■■□□□ 1.3
CDC42SE2-206ENST00000503291 CYP3A7-CYP3A51PA0A087WV96 503 aa23.18■■□□□ 1.3
CDC42SE2-206ENST00000503291 FAM86B1E9PN63 330 aa23.18■■□□□ 1.3
CDC42SE2-206ENST00000503291 FKTNO75072 461 aa23.18■■□□□ 1.3
CDC42SE2-206ENST00000503291 BAG4O95429 457 aaKnown RBP23.18■■□□□ 1.3
CDC42SE2-206ENST00000503291 FAM86B2P0C5J1 330 aa23.18■■□□□ 1.3
CDC42SE2-206ENST00000503291 CYP3A7P24462 503 aa23.18■■□□□ 1.3
CDC42SE2-206ENST00000503291 NPLOC4Q8TAT6 608 aa23.18■■□□□ 1.3
CDC42SE2-206ENST00000503291 CYP2W1Q8TAV3 490 aa23.18■■□□□ 1.3
CDC42SE2-206ENST00000503291 CD99L2Q8TCZ2 262 aa23.18■■□□□ 1.3
CDC42SE2-206ENST00000503291 SOCS4Q8WXH5 440 aa23.18■■□□□ 1.3
CDC42SE2-206ENST00000503291 POLR3EQ9NVU0 708 aa23.18■■□□□ 1.3
CDC42SE2-206ENST00000503291 RTEL1Q9NZ71 1219 aa23.18■■□□□ 1.3
CDC42SE2-206ENST00000503291 CNPY2Q9Y2B0 182 aa23.18■■□□□ 1.3
CDC42SE2-206ENST00000503291 DIS3Q9Y2L1 958 aaKnown RBP23.18■■□□□ 1.3
CDC42SE2-206ENST00000503291 ZSWIM8A7E2V4 1837 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms