RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	SF3A1	Q15459	793 aa	Known RBP	13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	INF2	Q27J81	1249 aa		13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	TTC38	Q5R3I4	469 aa		13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	SNRNP48	Q6IEG0	339 aa	Known RBP	13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	RIOX2	Q8IUF8	465 aa		13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	FAM43A	Q8N2R8	423 aa		13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	TBCK	Q8TEA7	893 aa		13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	ANO3	Q9BYT9	981 aa		13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	TXNRD2	Q9NNW7	524 aa		13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	ZCCHC17	Q9NP64	241 aa	Known RBP	13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	RNF146	Q9NTX7	359 aa		13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	MAP3K20	Q9NYL2	800 aa	Known RBP	13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	RBPJL	Q9UBG7	517 aa		13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	PNMA3	Q9UL41	463 aa		13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	NOL7	Q9UMY1	257 aa	Known RBP	13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	RABGAP1	Q9Y3P9	1069 aa		13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.87	□□□□□ -0.19
MATR3-231	ENST00000502394	POTEM	A6NI47	508 aa		13.86	□□□□□ -0.19
MATR3-231	ENST00000502394	GOLGA6L22	H0YM25	854 aa		13.86	□□□□□ -0.19
MATR3-231	ENST00000502394	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.86	□□□□□ -0.19
MATR3-231	ENST00000502394	PDHX	O00330	501 aa		13.86	□□□□□ -0.19
MATR3-231	ENST00000502394	POLR2M	P0CAP2	368 aa		13.86	□□□□□ -0.19
MATR3-231	ENST00000502394	CSPP1	Q1MSJ5	1256 aa		13.86	□□□□□ -0.19
MATR3-231	ENST00000502394	C4orf32	Q8N8J7	132 aa		13.86	□□□□□ -0.19
MATR3-231	ENST00000502394	CCDC102A	Q96A19	550 aa		13.86	□□□□□ -0.19
MATR3-231	ENST00000502394	PGBD1	Q96JS3	809 aa		13.86	□□□□□ -0.19
MATR3-231	ENST00000502394	SPATA32	Q96LK8	384 aa		13.86	□□□□□ -0.19
MATR3-231	ENST00000502394	TRERF1	Q96PN7	1200 aa		13.86	□□□□□ -0.19
MATR3-231	ENST00000502394	SPATC1L	Q9H0A9	340 aa		13.86	□□□□□ -0.19
MATR3-231	ENST00000502394	FRMPD4	Q14CM0	1322 aa		13.86	□□□□□ -0.19
MATR3-231	ENST00000502394	ADGRA2	Q96PE1	1338 aa		13.86	□□□□□ -0.19
MATR3-231	ENST00000502394	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.86	□□□□□ -0.19
MATR3-231	ENST00000502394	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	PEX10	O60683	326 aa		13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	PPP6R2	O75170	966 aa		13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	PRPF40A	O75400	957 aa	Known RBP	13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	CFB	P00751	764 aa		13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	CYP2C8	P10632	490 aa		13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	PTMS	P20962	102 aa		13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	HOXA13	P31271	388 aa	Predicted RBP	13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	SREBF1	P36956	1147 aa		13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	CEBPZ	Q03701	1054 aa	Known RBP	13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	ORC2	Q13416	577 aa	Predicted RBP	13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	POTEG	Q6S5H5	508 aa		13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	NEK8	Q86SG6	692 aa		13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	MCF2L2	Q86YR7	1114 aa		13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	CHST13	Q8NET6	341 aa		13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	KCNG4	Q8TDN1	519 aa		13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	MBOAT7	Q96N66	472 aa		13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	COL20A1	Q9P218	1284 aa		13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	MORF4L1	Q9UBU8	362 aa		13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	RPTOR	Q8N122	1335 aa		13.85	□□□□□ -0.19
MATR3-231	ENST00000502394	RASSF10	A6NK89	507 aa		13.84	□□□□□ -0.19
MATR3-231	ENST00000502394	SPTLC2	O15270	562 aa		13.84	□□□□□ -0.19
MATR3-231	ENST00000502394	GTPBP6	O43824	516 aa	Predicted RBP	13.84	□□□□□ -0.19
MATR3-231	ENST00000502394	GADD45B	O75293	160 aa	Predicted RBP	13.84	□□□□□ -0.19
MATR3-231	ENST00000502394	BMP15	O95972	392 aa		13.84	□□□□□ -0.19
MATR3-231	ENST00000502394	CYP3A4	P08684	503 aa		13.84	□□□□□ -0.19
MATR3-231	ENST00000502394	ATP2C1	P98194	919 aa	Predicted RBP	13.84	□□□□□ -0.19
MATR3-231	ENST00000502394	STK38	Q15208	465 aa		13.84	□□□□□ -0.19
MATR3-231	ENST00000502394		Q3C1V9	767 aa		13.84	□□□□□ -0.19
MATR3-231	ENST00000502394	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.84	□□□□□ -0.19
MATR3-231	ENST00000502394	MOXD1	Q6UVY6	613 aa		13.84	□□□□□ -0.19
MATR3-231	ENST00000502394	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.84	□□□□□ -0.19
MATR3-231	ENST00000502394	ACAD9	Q9H845	621 aa		13.84	□□□□□ -0.19
MATR3-231	ENST00000502394	HOMER2	Q9NSB8	354 aa		13.84	□□□□□ -0.19
MATR3-231	ENST00000502394	ABT1	Q9ULW3	272 aa	Known RBP	13.84	□□□□□ -0.19
MATR3-231	ENST00000502394	MYH7B	A7E2Y1	1941 aa		13.84	□□□□□ -0.19
MATR3-231	ENST00000502394	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	SLC25A27	O95847	323 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	ATP2B1	P20020	1258 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	PTPRE	P23469	700 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	CYP3A7	P24462	503 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	CIITA	P33076	1130 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	COPB2	P35606	906 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	GCLC	P48506	637 aa	Predicted RBP	13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	APLP1	P51693	650 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	USP11	P51784	963 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	INHBE	P58166	350 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	UBE2H	P62256	183 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	RPS6	P62753	249 aa	Known RBP	13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	ERVK-9	P63128	1117 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	ERVK-24	P63145	666 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	ARHGAP4	P98171	946 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	ZNF174	Q15697	407 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	PPP4R3A	Q6IN85	833 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	SLC30A10	Q6XR72	485 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	SHCBP1	Q8NEM2	672 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	PARK7	Q99497	189 aa	Known RBP	13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	PAGR1	Q9BTK6	254 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	R3HDML	Q9H3Y0	253 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	A1CF	Q9NQ94	594 aa	Known RBP	13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	FBXO40	Q9UH90	709 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	FBXO2	Q9UK22	296 aa	Predicted RBP	13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	PCDHA7	Q9UN72	937 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	CEP131	Q9UPN4	1083 aa		13.83	□□□□□ -0.2
MATR3-231	ENST00000502394	SPDYE3	A6NKU9	549 aa		13.82	□□□□□ -0.2
MATR3-231	ENST00000502394	TDP2	O95551	362 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms