RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 CELA3BP08861 270 aa5.89□□□□□ -1.47
CBX3-208ENST00000497498 PLS3P13797 630 aa5.89□□□□□ -1.47
CBX3-208ENST00000497498 CACNB2Q08289 660 aaPredicted RBP5.89□□□□□ -1.47
CBX3-208ENST00000497498 SCRN1Q12765 414 aa5.89□□□□□ -1.47
CBX3-208ENST00000497498 NCAPHQ15003 741 aa5.89□□□□□ -1.47
CBX3-208ENST00000497498 ZFYVE27Q5T4F4 411 aa5.89□□□□□ -1.47
CBX3-208ENST00000497498 MBLAC2Q68D91 279 aa5.89□□□□□ -1.47
CBX3-208ENST00000497498 CRACR2BQ8N4Y2 399 aaPredicted RBP5.89□□□□□ -1.47
CBX3-208ENST00000497498 PLEKHO2Q8TD55 490 aa5.89□□□□□ -1.47
CBX3-208ENST00000497498 KRTAP4-5Q9BYR2 181 aa5.89□□□□□ -1.47
CBX3-208ENST00000497498 CLEC1BQ9P126 229 aa5.89□□□□□ -1.47
CBX3-208ENST00000497498 INPP5FQ9Y2H2 1132 aa5.89□□□□□ -1.47
CBX3-208ENST00000497498 NTRK1P04629 796 aa5.88□□□□□ -1.47
CBX3-208ENST00000497498 NAT2P11245 290 aa5.88□□□□□ -1.47
CBX3-208ENST00000497498 TRIM59Q8IWR1 403 aa5.88□□□□□ -1.47
CBX3-208ENST00000497498 SMARCC2Q8TAQ2 1214 aa5.88□□□□□ -1.47
CBX3-208ENST00000497498 USP33Q8TEY7 942 aa5.88□□□□□ -1.47
CBX3-208ENST00000497498 DPF3Q92784 378 aa5.88□□□□□ -1.47
CBX3-208ENST00000497498 ANAPC16Q96DE5 110 aa5.88□□□□□ -1.47
CBX3-208ENST00000497498 MRGPRX3Q96LB0 322 aa5.88□□□□□ -1.47
CBX3-208ENST00000497498 SPATA25Q9BR10 227 aa5.88□□□□□ -1.47
CBX3-208ENST00000497498 GPRC5CQ9NQ84 441 aa5.88□□□□□ -1.47
CBX3-208ENST00000497498 CYP26B1Q9NR63 512 aa5.88□□□□□ -1.47
CBX3-208ENST00000497498 NOP56O00567 594 aaKnown RBP5.87□□□□□ -1.47
CBX3-208ENST00000497498 PRICKLE3O43900 615 aaPredicted RBP5.87□□□□□ -1.47
CBX3-208ENST00000497498 FUCA1P04066 466 aa5.87□□□□□ -1.47
CBX3-208ENST00000497498 THBDP07204 575 aa5.87□□□□□ -1.47
CBX3-208ENST00000497498 ATF4P18848 351 aaPredicted RBP5.87□□□□□ -1.47
CBX3-208ENST00000497498 KRTAP10-2P60368 255 aa5.87□□□□□ -1.47
CBX3-208ENST00000497498 CYP4F3Q08477 520 aa5.87□□□□□ -1.47
CBX3-208ENST00000497498 GTF2IRD2BQ6EKJ0 949 aa5.87□□□□□ -1.47
CBX3-208ENST00000497498 GTF2IRD2Q86UP8 949 aa5.87□□□□□ -1.47
CBX3-208ENST00000497498 NOX5Q96PH1 765 aa5.87□□□□□ -1.47
CBX3-208ENST00000497498 NKX2-4Q9H2Z4 354 aa5.87□□□□□ -1.47
CBX3-208ENST00000497498 RTP5Q14D33 572 aa5.86□□□□□ -1.47
CBX3-208ENST00000497498 INF2Q27J81 1249 aa5.86□□□□□ -1.47
CBX3-208ENST00000497498 NT5DC1Q5TFE4 455 aa5.86□□□□□ -1.47
CBX3-208ENST00000497498 PRRT2Q7Z6L0 340 aaPredicted RBP5.86□□□□□ -1.47
CBX3-208ENST00000497498 DCP2Q8IU60 420 aaKnown RBP5.86□□□□□ -1.47
CBX3-208ENST00000497498 CARFQ8N187 725 aa5.86□□□□□ -1.47
CBX3-208ENST00000497498 LINC00482Q8N8I6 264 aa5.86□□□□□ -1.47
CBX3-208ENST00000497498 NPLOC4Q8TAT6 608 aa5.86□□□□□ -1.47
CBX3-208ENST00000497498 FRS2Q8WU20 508 aa5.86□□□□□ -1.47
CBX3-208ENST00000497498 CCSER2Q9H7U1 834 aa5.86□□□□□ -1.47
CBX3-208ENST00000497498 SPATA6Q9NWH7 488 aaPredicted RBP5.86□□□□□ -1.47
CBX3-208ENST00000497498 SIT1Q9Y3P8 196 aa5.86□□□□□ -1.47
CBX3-208ENST00000497498 NOBOXO60393 691 aa5.85□□□□□ -1.47
CBX3-208ENST00000497498 NFKB2Q00653 900 aa5.85□□□□□ -1.47
CBX3-208ENST00000497498 EFEMP1Q12805 493 aa5.85□□□□□ -1.47
CBX3-208ENST00000497498 IQCEQ6IPM2 695 aa5.85□□□□□ -1.47
CBX3-208ENST00000497498 MARCH2Q9P0N8 246 aa5.85□□□□□ -1.47
CBX3-208ENST00000497498 ARNTLO00327 626 aa5.84□□□□□ -1.47
CBX3-208ENST00000497498 SGSM2O43147 1006 aa5.84□□□□□ -1.47
CBX3-208ENST00000497498 C8BP07358 591 aa5.84□□□□□ -1.47
CBX3-208ENST00000497498 E4F1Q66K89 784 aaPredicted RBP5.84□□□□□ -1.47
CBX3-208ENST00000497498 DBX2Q6ZNG2 339 aa5.84□□□□□ -1.47
CBX3-208ENST00000497498 MIB1Q86YT6 1006 aa5.84□□□□□ -1.47
CBX3-208ENST00000497498 LGR4Q9BXB1 951 aa5.84□□□□□ -1.47
CBX3-208ENST00000497498 PCDH18Q9HCL0 1135 aa5.84□□□□□ -1.47
CBX3-208ENST00000497498 USP40Q9NVE5 1235 aa5.84□□□□□ -1.47
CBX3-208ENST00000497498 NTMQ9P121 344 aa5.84□□□□□ -1.47
CBX3-208ENST00000497498 CNOT11Q9UKZ1 510 aaKnown RBP5.84□□□□□ -1.47
CBX3-208ENST00000497498 C22orf46C9J442 243 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 SMAD7O15105 426 aaKnown RBP5.83□□□□□ -1.48
CBX3-208ENST00000497498 SCG5P05408 212 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 CYP2C8P10632 490 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 HOXC12P31275 282 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 SLC6A11P48066 632 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 SARSP49591 514 aaKnown RBP5.83□□□□□ -1.48
CBX3-208ENST00000497498 PLP2Q04941 152 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 TESK1Q15569 626 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 TNNI3KQ59H18 835 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 UBXN11Q5T124 520 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 C6orf15Q6UXA7 325 aaPredicted RBP5.83□□□□□ -1.48
CBX3-208ENST00000497498 ETV3LQ6ZN32 361 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 ZNF761Q86XN6 746 aaPredicted RBP5.83□□□□□ -1.48
CBX3-208ENST00000497498 RIOX2Q8IUF8 465 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 CCDC103Q8IW40 242 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 TEX2Q8IWB9 1127 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 Q8N1Y9 231 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 ZBTB8AQ96BR9 441 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 DDX11Q96FC9 970 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 GORASP1Q9BQQ3 440 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 BDH2Q9BUT1 245 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 LNPKQ9C0E8 428 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 AP5M1Q9H0R1 490 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 JAG2Q9Y219 1238 aa5.83□□□□□ -1.48
CBX3-208ENST00000497498 TBX1O43435 398 aa5.82□□□□□ -1.48
CBX3-208ENST00000497498 ADRB1P08588 477 aa5.82□□□□□ -1.48
CBX3-208ENST00000497498 SPATS1Q496A3 300 aa5.82□□□□□ -1.48
CBX3-208ENST00000497498 MROH9Q5TGP6 573 aa5.82□□□□□ -1.48
CBX3-208ENST00000497498 TTLL7Q6ZT98 887 aa5.82□□□□□ -1.48
CBX3-208ENST00000497498 ZNF227Q86WZ6 799 aa5.82□□□□□ -1.48
CBX3-208ENST00000497498 HOMEZQ8IX15 550 aa5.82□□□□□ -1.48
CBX3-208ENST00000497498 FAM178BQ8IXR5 827 aa5.82□□□□□ -1.48
CBX3-208ENST00000497498 BTN2A2Q8WVV5 523 aa5.82□□□□□ -1.48
CBX3-208ENST00000497498 SEC14L1Q92503 715 aa5.82□□□□□ -1.48
CBX3-208ENST00000497498 PPP1R14AQ96A00 147 aa5.82□□□□□ -1.48
CBX3-208ENST00000497498 C11orf84Q9BUA3 381 aaPredicted RBP5.82□□□□□ -1.48
CBX3-208ENST00000497498 CAPN10Q9HC96 672 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms