RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 HAND2P61296 217 aa14.5□□□□□ -0.09
SAMM50-205ENST00000493621 TFF2Q03403 129 aa14.5□□□□□ -0.09
SAMM50-205ENST00000493621 ZNF543Q08ER8 600 aa14.5□□□□□ -0.09
SAMM50-205ENST00000493621 SKIV2LQ15477 1246 aaKnown RBP14.5□□□□□ -0.09
SAMM50-205ENST00000493621 MCMDC2Q4G0Z9 681 aa14.5□□□□□ -0.09
SAMM50-205ENST00000493621 NFRKBQ6P4R8 1299 aa14.5□□□□□ -0.09
SAMM50-205ENST00000493621 RETREG2Q8NC44 543 aa14.5□□□□□ -0.09
SAMM50-205ENST00000493621 SCFD2Q8WU76 684 aa14.5□□□□□ -0.09
SAMM50-205ENST00000493621 FTOQ9C0B1 505 aaKnown RBP eCLIP14.5□□□□□ -0.09
SAMM50-205ENST00000493621 PNMA2Q9UL42 364 aa14.5□□□□□ -0.09
SAMM50-205ENST00000493621 KIAA1217Q5T5P2 1943 aa14.5□□□□□ -0.09
SAMM50-205ENST00000493621 A6NJR5 290 aa14.49□□□□□ -0.09
SAMM50-205ENST00000493621 KPNA6O60684 536 aa14.49□□□□□ -0.09
SAMM50-205ENST00000493621 IQCF3P0C7M6 154 aa14.49□□□□□ -0.09
SAMM50-205ENST00000493621 HSPD1P10809 573 aaKnown RBP14.49□□□□□ -0.09
SAMM50-205ENST00000493621 EDNRBP24530 442 aa14.49□□□□□ -0.09
SAMM50-205ENST00000493621 USH1GQ495M9 461 aa14.49□□□□□ -0.09
SAMM50-205ENST00000493621 DNERQ8NFT8 737 aa14.49□□□□□ -0.09
SAMM50-205ENST00000493621 NECAB3Q96P71 396 aaPredicted RBP14.49□□□□□ -0.09
SAMM50-205ENST00000493621 SLC9A7Q96T83 725 aa14.49□□□□□ -0.09
SAMM50-205ENST00000493621 WDR19Q8NEZ3 1342 aa14.48□□□□□ -0.09
SAMM50-205ENST00000493621 EPOPA6NHQ4 379 aa14.48□□□□□ -0.09
SAMM50-205ENST00000493621 B4DLN1 442 aa14.48□□□□□ -0.09
SAMM50-205ENST00000493621 PITPNM1O00562 1244 aa14.48□□□□□ -0.09
SAMM50-205ENST00000493621 GTPBP6O43824 516 aaPredicted RBP14.48□□□□□ -0.09
SAMM50-205ENST00000493621 ARIH2O95376 493 aa14.48□□□□□ -0.09
SAMM50-205ENST00000493621 GOLGA8HP0CJ92 632 aa14.48□□□□□ -0.09
SAMM50-205ENST00000493621 BMP1P13497 986 aa14.48□□□□□ -0.09
SAMM50-205ENST00000493621 MRPL12P52815 198 aaKnown RBP14.48□□□□□ -0.09
SAMM50-205ENST00000493621 PDE1AP54750 535 aa14.48□□□□□ -0.09
SAMM50-205ENST00000493621 PTPN11Q06124 597 aaPredicted RBP14.48□□□□□ -0.09
SAMM50-205ENST00000493621 BFSP2Q13515 415 aa14.48□□□□□ -0.09
SAMM50-205ENST00000493621 ZNF589Q86UQ0 364 aaPredicted RBP14.48□□□□□ -0.09
SAMM50-205ENST00000493621 PHOSPHO2Q8TCD6 241 aa14.48□□□□□ -0.09
SAMM50-205ENST00000493621 TTC14Q96N46 770 aa14.48□□□□□ -0.09
SAMM50-205ENST00000493621 NOD1Q9Y239 953 aa14.48□□□□□ -0.09
SAMM50-205ENST00000493621 MTCH2Q9Y6C9 303 aa14.48□□□□□ -0.09
SAMM50-205ENST00000493621 ZMYM6O95789 1325 aa14.47□□□□□ -0.09
SAMM50-205ENST00000493621 MYH7BA7E2Y1 1941 aa14.47□□□□□ -0.09
SAMM50-205ENST00000493621 COL4A4P53420 1690 aaPredicted RBP14.47□□□□□ -0.09
SAMM50-205ENST00000493621 ARHGEF15O94989 841 aa14.47□□□□□ -0.09
SAMM50-205ENST00000493621 SNHG28P0DPA3 235 aa14.47□□□□□ -0.09
SAMM50-205ENST00000493621 KCNQ1P51787 676 aa14.47□□□□□ -0.09
SAMM50-205ENST00000493621 TAP1Q03518 808 aa14.47□□□□□ -0.09
SAMM50-205ENST00000493621 NMIQ13287 307 aaPredicted RBP14.47□□□□□ -0.09
SAMM50-205ENST00000493621 AAK1Q2M2I8 961 aa14.47□□□□□ -0.09
SAMM50-205ENST00000493621 KRT40Q6A162 431 aa14.47□□□□□ -0.09
SAMM50-205ENST00000493621 MFSD6Q6ZSS7 791 aa14.47□□□□□ -0.09
SAMM50-205ENST00000493621 HERC6Q8IVU3 1022 aa14.47□□□□□ -0.09
SAMM50-205ENST00000493621 ARNTL2Q8WYA1 636 aa14.47□□□□□ -0.09
SAMM50-205ENST00000493621 ZKSCAN3Q9BRR0 538 aa14.47□□□□□ -0.09
SAMM50-205ENST00000493621 UBA5Q9GZZ9 404 aa14.47□□□□□ -0.09
SAMM50-205ENST00000493621 CPVLQ9H3G5 476 aa14.47□□□□□ -0.09
SAMM50-205ENST00000493621 XIRP2A4UGR9 3374 aa14.47□□□□□ -0.09
SAMM50-205ENST00000493621 LAMA4Q16363 1823 aa14.47□□□□□ -0.09
SAMM50-205ENST00000493621 CCDC171Q6TFL3 1326 aa14.46□□□□□ -0.09
SAMM50-205ENST00000493621 KIF28PB7ZC32 967 aa14.46□□□□□ -0.09
SAMM50-205ENST00000493621 POU3F3P20264 500 aaPredicted RBP14.46□□□□□ -0.09
SAMM50-205ENST00000493621 PTGISQ16647 500 aa14.46□□□□□ -0.09
SAMM50-205ENST00000493621 TBC1D10CQ8IV04 446 aa14.46□□□□□ -0.09
SAMM50-205ENST00000493621 AFG1LQ8WV93 481 aa14.46□□□□□ -0.09
SAMM50-205ENST00000493621 TBC1D5Q92609 795 aa14.46□□□□□ -0.09
SAMM50-205ENST00000493621 NEDD4P46934 1319 aa14.45□□□□□ -0.1
SAMM50-205ENST00000493621 TRIM6-TRIM34B2RNG4 842 aa14.45□□□□□ -0.1
SAMM50-205ENST00000493621 MMP3P08254 477 aa14.45□□□□□ -0.1
SAMM50-205ENST00000493621 PCP11498 1178 aaKnown RBP14.45□□□□□ -0.1
SAMM50-205ENST00000493621 LY6KQ17RY6 165 aa14.45□□□□□ -0.1
SAMM50-205ENST00000493621 GPATCH4Q5T3I0 446 aaKnown RBP14.45□□□□□ -0.1
SAMM50-205ENST00000493621 GDF6Q6KF10 455 aaPredicted RBP14.45□□□□□ -0.1
SAMM50-205ENST00000493621 CCDC62Q6P9F0 684 aa14.45□□□□□ -0.1
SAMM50-205ENST00000493621 SEPT14Q6ZU15 432 aa14.45□□□□□ -0.1
SAMM50-205ENST00000493621 CHST3Q7LGC8 479 aa14.45□□□□□ -0.1
SAMM50-205ENST00000493621 CCDC155Q8N6L0 562 aa14.45□□□□□ -0.1
SAMM50-205ENST00000493621 RGS22Q8NE09 1264 aa14.45□□□□□ -0.1
SAMM50-205ENST00000493621 ESR2Q92731 530 aa14.45□□□□□ -0.1
SAMM50-205ENST00000493621 RNF41Q9H4P4 317 aaPredicted RBP14.45□□□□□ -0.1
SAMM50-205ENST00000493621 TLL1O43897 1013 aa14.44□□□□□ -0.1
SAMM50-205ENST00000493621 BAIAP3O94812 1187 aa14.44□□□□□ -0.1
SAMM50-205ENST00000493621 GH1P01241 217 aa14.44□□□□□ -0.1
SAMM50-205ENST00000493621 KCNJ6P48051 423 aa14.44□□□□□ -0.1
SAMM50-205ENST00000493621 ARHGAP1Q07960 439 aa14.44□□□□□ -0.1
SAMM50-205ENST00000493621 CDC37Q16543 378 aaPredicted RBP14.44□□□□□ -0.1
SAMM50-205ENST00000493621 CAGE1Q8TC20 777 aa14.44□□□□□ -0.1
SAMM50-205ENST00000493621 RILPL2Q969X0 211 aa14.44□□□□□ -0.1
SAMM50-205ENST00000493621 TAAR1Q96RJ0 339 aa14.44□□□□□ -0.1
SAMM50-205ENST00000493621 ABCB11O95342 1321 aa14.43□□□□□ -0.1
SAMM50-205ENST00000493621 GRB10Q13322 594 aa14.43□□□□□ -0.1
SAMM50-205ENST00000493621 SPRED2Q7Z698 418 aa14.43□□□□□ -0.1
SAMM50-205ENST00000493621 TMCO2Q7Z6W1 182 aaPredicted RBP14.43□□□□□ -0.1
SAMM50-205ENST00000493621 DGKHQ86XP1 1220 aa14.43□□□□□ -0.1
SAMM50-205ENST00000493621 TICAM2Q86XR7 235 aa14.43□□□□□ -0.1
SAMM50-205ENST00000493621 ADGRF4Q8IZF3 695 aa14.43□□□□□ -0.1
SAMM50-205ENST00000493621 PNMA1Q8ND90 353 aa14.43□□□□□ -0.1
SAMM50-205ENST00000493621 SYTL5Q8TDW5 730 aaPredicted RBP14.43□□□□□ -0.1
SAMM50-205ENST00000493621 NSUN6Q8TEA1 469 aaKnown RBP14.43□□□□□ -0.1
SAMM50-205ENST00000493621 AFAP1L1Q8TED9 768 aa14.43□□□□□ -0.1
SAMM50-205ENST00000493621 KAT2BQ92831 832 aa14.43□□□□□ -0.1
SAMM50-205ENST00000493621 CTAGE1Q96RT6 745 aa14.43□□□□□ -0.1
SAMM50-205ENST00000493621 CRBNQ96SW2 442 aa14.43□□□□□ -0.1
SAMM50-205ENST00000493621 COL20A1Q9P218 1284 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms