RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 TRIOBPQ9H2D6 2365 aa15.92■□□□□ 0.14
PTPN7-215ENST00000492451 LRRC37A2A6NM11 1700 aa15.92■□□□□ 0.14
PTPN7-215ENST00000492451 hCG_1642624A0A1W2PR95 340 aa15.92■□□□□ 0.14
PTPN7-215ENST00000492451 DNM1LO00429 736 aa15.92■□□□□ 0.14
PTPN7-215ENST00000492451 DUSP11O75319 330 aaKnown RBP15.92■□□□□ 0.14
PTPN7-215ENST00000492451 IQSEC1Q6DN90 963 aa15.92■□□□□ 0.14
PTPN7-215ENST00000492451 HEATR3Q7Z4Q2 680 aa15.92■□□□□ 0.14
PTPN7-215ENST00000492451 RNF180Q86T96 592 aa15.92■□□□□ 0.14
PTPN7-215ENST00000492451 TEX2Q8IWB9 1127 aa15.92■□□□□ 0.14
PTPN7-215ENST00000492451 TAAR1Q96RJ0 339 aa15.92■□□□□ 0.14
PTPN7-215ENST00000492451 UPF2Q9HAU5 1272 aaKnown RBP15.92■□□□□ 0.14
PTPN7-215ENST00000492451 SPC25Q9HBM1 224 aa15.92■□□□□ 0.14
PTPN7-215ENST00000492451 COL20A1Q9P218 1284 aa15.92■□□□□ 0.14
PTPN7-215ENST00000492451 ZMYND8Q9ULU4 1186 aaPredicted RBP15.92■□□□□ 0.14
PTPN7-215ENST00000492451 KBTBD13C9JR72 458 aa15.91■□□□□ 0.14
PTPN7-215ENST00000492451 PIK3CDO00329 1044 aa15.91■□□□□ 0.14
PTPN7-215ENST00000492451 HOXA13P31271 388 aaPredicted RBP15.91■□□□□ 0.14
PTPN7-215ENST00000492451 AKAP17AQ02040 695 aaKnown RBP15.91■□□□□ 0.14
PTPN7-215ENST00000492451 TNFAIP2Q03169 654 aa15.91■□□□□ 0.14
PTPN7-215ENST00000492451 STXBP2Q15833 593 aa15.91■□□□□ 0.14
PTPN7-215ENST00000492451 LRRC26Q2I0M4 334 aa15.91■□□□□ 0.14
PTPN7-215ENST00000492451 TAPT1Q6NXT6 567 aa15.91■□□□□ 0.14
PTPN7-215ENST00000492451 PPP1R18Q6NYC8 613 aa15.91■□□□□ 0.14
PTPN7-215ENST00000492451 CPLX2Q6PUV4 134 aaKnown RBP15.91■□□□□ 0.14
PTPN7-215ENST00000492451 EEPD1Q7L9B9 569 aa15.91■□□□□ 0.14
PTPN7-215ENST00000492451 FBXO16Q8IX29 292 aaPredicted RBP15.91■□□□□ 0.14
PTPN7-215ENST00000492451 PSTPIP2Q9H939 334 aa15.91■□□□□ 0.14
PTPN7-215ENST00000492451 PXMP2Q9NR77 195 aa15.91■□□□□ 0.14
PTPN7-215ENST00000492451 PRPF3O43395 683 aaKnown RBP15.9■□□□□ 0.14
PTPN7-215ENST00000492451 IFNAR1P17181 557 aa15.9■□□□□ 0.14
PTPN7-215ENST00000492451 SYN1P17600 705 aa15.9■□□□□ 0.14
PTPN7-215ENST00000492451 EIF2AK2P19525 551 aaKnown RBP15.9■□□□□ 0.14
PTPN7-215ENST00000492451 NEK4P51957 841 aa15.9■□□□□ 0.14
PTPN7-215ENST00000492451 CCT2P78371 535 aaKnown RBP15.9■□□□□ 0.14
PTPN7-215ENST00000492451 LRRC41Q15345 812 aa15.9■□□□□ 0.14
PTPN7-215ENST00000492451 NOL8Q76FK4 1167 aaKnown RBP15.9■□□□□ 0.14
PTPN7-215ENST00000492451 FCHSD1Q86WN1 690 aa15.9■□□□□ 0.14
PTPN7-215ENST00000492451 SMARCC2Q8TAQ2 1214 aa15.9■□□□□ 0.14
PTPN7-215ENST00000492451 C22orf23Q9BZE7 217 aa15.9■□□□□ 0.14
PTPN7-215ENST00000492451 GLT8D2Q9H1C3 349 aa15.9■□□□□ 0.14
PTPN7-215ENST00000492451 RBM47A0AV96 593 aaKnown RBP15.89■□□□□ 0.13
PTPN7-215ENST00000492451 CPLX1O14810 134 aa15.89■□□□□ 0.13
PTPN7-215ENST00000492451 EIF3JO75822 258 aaKnown RBP15.89■□□□□ 0.13
PTPN7-215ENST00000492451 PGK1P00558 417 aa15.89■□□□□ 0.13
PTPN7-215ENST00000492451 MYCNP04198 464 aaPredicted RBP15.89■□□□□ 0.13
PTPN7-215ENST00000492451 NR3C2P08235 984 aa15.89■□□□□ 0.13
PTPN7-215ENST00000492451 SCG2P13521 617 aa15.89■□□□□ 0.13
PTPN7-215ENST00000492451 ADCYAP1R1P41586 468 aa15.89■□□□□ 0.13
PTPN7-215ENST00000492451 AK2P54819 239 aa15.89■□□□□ 0.13
PTPN7-215ENST00000492451 NAPAP54920 295 aa15.89■□□□□ 0.13
PTPN7-215ENST00000492451 PFKFB3Q16875 520 aaPredicted RBP15.89■□□□□ 0.13
PTPN7-215ENST00000492451 GJC2Q5T442 439 aaPredicted RBP15.89■□□□□ 0.13
PTPN7-215ENST00000492451 WWC2Q6AWC2 1192 aa15.89■□□□□ 0.13
PTPN7-215ENST00000492451 TRIM22Q8IYM9 498 aa15.89■□□□□ 0.13
PTPN7-215ENST00000492451 SCFD2Q8WU76 684 aa15.89■□□□□ 0.13
PTPN7-215ENST00000492451 GPKOWQ92917 476 aaPredicted RBP eCLIP15.89■□□□□ 0.13
PTPN7-215ENST00000492451 TSEN34Q9BSV6 310 aaKnown RBP15.89■□□□□ 0.13
PTPN7-215ENST00000492451 RNF26Q9BY78 433 aaPredicted RBP15.89■□□□□ 0.13
PTPN7-215ENST00000492451 WDR11Q9BZH6 1224 aa15.89■□□□□ 0.13
PTPN7-215ENST00000492451 AP5M1Q9H0R1 490 aa15.89■□□□□ 0.13
PTPN7-215ENST00000492451 UPF3AQ9H1J1 476 aaKnown RBP15.89■□□□□ 0.13
PTPN7-215ENST00000492451 NCOA5Q9HCD5 579 aaKnown RBP15.89■□□□□ 0.13
PTPN7-215ENST00000492451 PDGFCQ9NRA1 345 aa15.89■□□□□ 0.13
PTPN7-215ENST00000492451 BARHL2Q9NY43 387 aa15.89■□□□□ 0.13
PTPN7-215ENST00000492451 Q9Y3F1 56 aa15.89■□□□□ 0.13
PTPN7-215ENST00000492451 DDX49Q9Y6V7 483 aaKnown RBP15.89■□□□□ 0.13
PTPN7-215ENST00000492451 SYNRGQ9UMZ2 1314 aa15.89■□□□□ 0.13
PTPN7-215ENST00000492451 MEIS2O14770 477 aa15.88■□□□□ 0.13
PTPN7-215ENST00000492451 ADAMTS4O75173 837 aa15.88■□□□□ 0.13
PTPN7-215ENST00000492451 RBM25P49756 843 aaKnown RBP15.88■□□□□ 0.13
PTPN7-215ENST00000492451 GJA9P57773 515 aa15.88■□□□□ 0.13
PTPN7-215ENST00000492451 NTRK3Q16288 839 aa15.88■□□□□ 0.13
PTPN7-215ENST00000492451 CCDC12Q8WUD4 166 aaPredicted RBP15.88■□□□□ 0.13
PTPN7-215ENST00000492451 LENG1Q96BZ8 264 aaPredicted RBP15.88■□□□□ 0.13
PTPN7-215ENST00000492451 PDCD2LQ9BRP1 358 aa15.88■□□□□ 0.13
PTPN7-215ENST00000492451 LARP6Q9BRS8 491 aaKnown RBP15.88■□□□□ 0.13
PTPN7-215ENST00000492451 SLKQ9H2G2 1235 aaPredicted RBP15.88■□□□□ 0.13
PTPN7-215ENST00000492451 GNEQ9Y223 722 aaKnown RBP15.88■□□□□ 0.13
PTPN7-215ENST00000492451 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.87■□□□□ 0.13
PTPN7-215ENST00000492451 STXBP3O00186 592 aa15.87■□□□□ 0.13
PTPN7-215ENST00000492451 NKRFO15226 690 aaKnown RBP eCLIP15.87■□□□□ 0.13
PTPN7-215ENST00000492451 ADCY6O43306 1168 aa15.87■□□□□ 0.13
PTPN7-215ENST00000492451 CDKL5O76039 1030 aa15.87■□□□□ 0.13
PTPN7-215ENST00000492451 SMPD1P17405 629 aa15.87■□□□□ 0.13
PTPN7-215ENST00000492451 CST5P28325 142 aaPredicted RBP15.87■□□□□ 0.13
PTPN7-215ENST00000492451 CCND2P30279 289 aa15.87■□□□□ 0.13
PTPN7-215ENST00000492451 ADCY7P51828 1080 aa15.87■□□□□ 0.13
PTPN7-215ENST00000492451 NKX3-2P78367 333 aa15.87■□□□□ 0.13
PTPN7-215ENST00000492451 SSRP1Q08945 709 aaKnown RBP15.87■□□□□ 0.13
PTPN7-215ENST00000492451 STK3Q13188 491 aa15.87■□□□□ 0.13
PTPN7-215ENST00000492451 TTLL4Q14679 1199 aa15.87■□□□□ 0.13
PTPN7-215ENST00000492451 PGM5Q15124 567 aa15.87■□□□□ 0.13
PTPN7-215ENST00000492451 DUSP28Q4G0W2 176 aa15.87■□□□□ 0.13
PTPN7-215ENST00000492451 XRRA1Q6P2D8 792 aa15.87■□□□□ 0.13
PTPN7-215ENST00000492451 USP17L6PQ6QN14 398 aa15.87■□□□□ 0.13
PTPN7-215ENST00000492451 VSIG10LQ86VR7 867 aa15.87■□□□□ 0.13
PTPN7-215ENST00000492451 PCSK9Q8NBP7 692 aaKnown RBP15.87■□□□□ 0.13
PTPN7-215ENST00000492451 IL27Q8NEV9 243 aa15.87■□□□□ 0.13
PTPN7-215ENST00000492451 PHKBQ93100 1093 aa15.87■□□□□ 0.13
PTPN7-215ENST00000492451 GDF15Q99988 308 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms