RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 LOC102724159A0A0B4J2E5 919 aa16.28■□□□□ 0.2
VTI1A-206ENST00000489142 RBM47A0AV96 593 aaKnown RBP16.28■□□□□ 0.2
VTI1A-206ENST00000489142 MYL3P08590 195 aa16.28■□□□□ 0.2
VTI1A-206ENST00000489142 HOXA13P31271 388 aaPredicted RBP16.28■□□□□ 0.2
VTI1A-206ENST00000489142 EPHB4P54760 987 aa16.28■□□□□ 0.2
VTI1A-206ENST00000489142 PPP2R5BQ15173 497 aa16.28■□□□□ 0.2
VTI1A-206ENST00000489142 PWP2Q15269 919 aaKnown RBP16.28■□□□□ 0.2
VTI1A-206ENST00000489142 NFXL1Q6ZNB6 911 aa16.28■□□□□ 0.2
VTI1A-206ENST00000489142 SEPT14Q6ZU15 432 aa16.28■□□□□ 0.2
VTI1A-206ENST00000489142 NSUN6Q8TEA1 469 aaKnown RBP16.28■□□□□ 0.2
VTI1A-206ENST00000489142 TOX2Q96NM4 488 aa16.28■□□□□ 0.2
VTI1A-206ENST00000489142 RIOX1Q9H6W3 641 aa16.28■□□□□ 0.2
VTI1A-206ENST00000489142 Q9Y3F1 56 aa16.28■□□□□ 0.2
VTI1A-206ENST00000489142 MYH7BA7E2Y1 1941 aa16.27■□□□□ 0.2
VTI1A-206ENST00000489142 MROH7Q68CQ1 1323 aa16.27■□□□□ 0.2
VTI1A-206ENST00000489142 SH2B2O14492 632 aaPredicted RBP16.27■□□□□ 0.2
VTI1A-206ENST00000489142 ZEB2O60315 1214 aa16.27■□□□□ 0.2
VTI1A-206ENST00000489142 CDC45O75419 566 aa16.27■□□□□ 0.2
VTI1A-206ENST00000489142 TXNP10599 105 aaKnown RBP16.27■□□□□ 0.2
VTI1A-206ENST00000489142 MCM5P33992 734 aa16.27■□□□□ 0.2
VTI1A-206ENST00000489142 ITGA7Q13683 1181 aa16.27■□□□□ 0.2
VTI1A-206ENST00000489142 ARHGEF16Q5VV41 709 aa16.27■□□□□ 0.2
VTI1A-206ENST00000489142 FAM126BQ8IXS8 530 aa16.27■□□□□ 0.2
VTI1A-206ENST00000489142 CMTR1Q8N1G2 835 aaKnown RBP16.27■□□□□ 0.2
VTI1A-206ENST00000489142 SCFD2Q8WU76 684 aa16.27■□□□□ 0.2
VTI1A-206ENST00000489142 PPP1R12CQ9BZL4 782 aa16.27■□□□□ 0.2
VTI1A-206ENST00000489142 TBX21Q9UL17 535 aa16.27■□□□□ 0.2
VTI1A-206ENST00000489142 PLEKHA8P1O95397 391 aa16.26■□□□□ 0.19
VTI1A-206ENST00000489142 HSD17B4P51659 736 aa16.26■□□□□ 0.19
VTI1A-206ENST00000489142 LY6KQ17RY6 165 aa16.26■□□□□ 0.19
VTI1A-206ENST00000489142 ZFP91Q96JP5 570 aaPredicted RBP16.26■□□□□ 0.19
VTI1A-206ENST00000489142 TCEANC2Q96MN5 208 aa16.26■□□□□ 0.19
VTI1A-206ENST00000489142 PXMP2Q9NR77 195 aa16.26■□□□□ 0.19
VTI1A-206ENST00000489142 CCDC69A6NI79 296 aa16.25■□□□□ 0.19
VTI1A-206ENST00000489142 B4DLN1 442 aa16.25■□□□□ 0.19
VTI1A-206ENST00000489142 CABYRO75952 493 aa16.25■□□□□ 0.19
VTI1A-206ENST00000489142 DDAH1O94760 285 aa16.25■□□□□ 0.19
VTI1A-206ENST00000489142 TIMP1P01033 207 aa16.25■□□□□ 0.19
VTI1A-206ENST00000489142 MYCLP12524 364 aaPredicted RBP16.25■□□□□ 0.19
VTI1A-206ENST00000489142 CPT1AP50416 773 aa16.25■□□□□ 0.19
VTI1A-206ENST00000489142 MRPL12P52815 198 aaKnown RBP16.25■□□□□ 0.19
VTI1A-206ENST00000489142 CHMP4BP1P59074 171 aa16.25■□□□□ 0.19
VTI1A-206ENST00000489142 FPGSQ05932 587 aa16.25■□□□□ 0.19
VTI1A-206ENST00000489142 TTLL4Q14679 1199 aa16.25■□□□□ 0.19
VTI1A-206ENST00000489142 FCHSD1Q86WN1 690 aa16.25■□□□□ 0.19
VTI1A-206ENST00000489142 DEFB123Q8N688 67 aa16.25■□□□□ 0.19
VTI1A-206ENST00000489142 IL31RAQ8NI17 732 aa16.25■□□□□ 0.19
VTI1A-206ENST00000489142 CTCFLQ8NI51 663 aaPredicted RBP16.25■□□□□ 0.19
VTI1A-206ENST00000489142 TRPV6Q9H1D0 765 aa16.25■□□□□ 0.19
VTI1A-206ENST00000489142 UMODL1Q5DID0 1318 aa16.24■□□□□ 0.19
VTI1A-206ENST00000489142 SCN10AQ9Y5Y9 1956 aa16.24■□□□□ 0.19
VTI1A-206ENST00000489142 PNMA6FA0A0J9YX94 578 aa16.24■□□□□ 0.19
VTI1A-206ENST00000489142 TLR3O15455 904 aaKnown RBP16.24■□□□□ 0.19
VTI1A-206ENST00000489142 SORBS3O60504 671 aa16.24■□□□□ 0.19
VTI1A-206ENST00000489142 B4GALT4O60513 344 aa16.24■□□□□ 0.19
VTI1A-206ENST00000489142 CD4P01730 458 aa16.24■□□□□ 0.19
VTI1A-206ENST00000489142 NR3C2P08235 984 aa16.24■□□□□ 0.19
VTI1A-206ENST00000489142 CYP2C18P33260 490 aa16.24■□□□□ 0.19
VTI1A-206ENST00000489142 PURAQ00577 322 aaKnown RBP16.24■□□□□ 0.19
VTI1A-206ENST00000489142 STXBP2Q15833 593 aa16.24■□□□□ 0.19
VTI1A-206ENST00000489142 CCDC62Q6P9F0 684 aa16.24■□□□□ 0.19
VTI1A-206ENST00000489142 RASEFQ8IZ41 740 aa16.24■□□□□ 0.19
VTI1A-206ENST00000489142 SLC43A3Q8NBI5 491 aa16.24■□□□□ 0.19
VTI1A-206ENST00000489142 TMEM87BQ96K49 555 aa16.24■□□□□ 0.19
VTI1A-206ENST00000489142 DOCK5Q9H7D0 1870 aa16.24■□□□□ 0.19
VTI1A-206ENST00000489142 hCG_1642624A0A1W2PR95 340 aa16.23■□□□□ 0.19
VTI1A-206ENST00000489142 NKRFO15226 690 aaKnown RBP eCLIP16.23■□□□□ 0.19
VTI1A-206ENST00000489142 ADCK5Q3MIX3 580 aa16.23■□□□□ 0.19
VTI1A-206ENST00000489142 MICU3Q86XE3 530 aa16.23■□□□□ 0.19
VTI1A-206ENST00000489142 SRBD1Q8N5C6 995 aaKnown RBP16.23■□□□□ 0.19
VTI1A-206ENST00000489142 AFG1LQ8WV93 481 aa16.23■□□□□ 0.19
VTI1A-206ENST00000489142 RNPC3Q96LT9 517 aaKnown RBP16.23■□□□□ 0.19
VTI1A-206ENST00000489142 FAM161BQ96MY7 647 aa16.23■□□□□ 0.19
VTI1A-206ENST00000489142 IWS1Q96ST2 819 aa16.23■□□□□ 0.19
VTI1A-206ENST00000489142 PDCD2LQ9BRP1 358 aa16.23■□□□□ 0.19
VTI1A-206ENST00000489142 TRMT13Q9NUP7 481 aaKnown RBP16.23■□□□□ 0.19
VTI1A-206ENST00000489142 POLR3EQ9NVU0 708 aa16.23■□□□□ 0.19
VTI1A-206ENST00000489142 GCOM1H8Y6P7 765 aaPredicted RBP16.22■□□□□ 0.19
VTI1A-206ENST00000489142 POLR2MP0CAP2 368 aa16.22■□□□□ 0.19
VTI1A-206ENST00000489142 ACRP10323 421 aa16.22■□□□□ 0.19
VTI1A-206ENST00000489142 CSF2RAP15509 400 aa16.22■□□□□ 0.19
VTI1A-206ENST00000489142 KIF5BP33176 963 aa16.22■□□□□ 0.19
VTI1A-206ENST00000489142 GHRHRQ02643 423 aa16.22■□□□□ 0.19
VTI1A-206ENST00000489142 ARHGAP1Q07960 439 aa16.22■□□□□ 0.19
VTI1A-206ENST00000489142 PGM5Q15124 567 aa16.22■□□□□ 0.19
VTI1A-206ENST00000489142 FAM47CQ5HY64 1035 aa16.22■□□□□ 0.19
VTI1A-206ENST00000489142 RNF20Q5VTR2 975 aa16.22■□□□□ 0.19
VTI1A-206ENST00000489142 CCDC82Q8N4S0 544 aa16.22■□□□□ 0.19
VTI1A-206ENST00000489142 RRP36Q96EU6 259 aaKnown RBP16.22■□□□□ 0.19
VTI1A-206ENST00000489142 MTG1Q9BT17 334 aaPredicted RBP16.22■□□□□ 0.19
VTI1A-206ENST00000489142 SPZ1Q9BXG8 430 aa16.22■□□□□ 0.19
VTI1A-206ENST00000489142 MAF1Q9H063 256 aa16.22■□□□□ 0.19
VTI1A-206ENST00000489142 SLC12A7Q9Y666 1083 aa16.22■□□□□ 0.19
VTI1A-206ENST00000489142 A6NJR5 290 aa16.21■□□□□ 0.19
VTI1A-206ENST00000489142 EIF3JO75822 258 aaKnown RBP16.21■□□□□ 0.19
VTI1A-206ENST00000489142 RGS20O76081 388 aa16.21■□□□□ 0.19
VTI1A-206ENST00000489142 GH1P01241 217 aa16.21■□□□□ 0.19
VTI1A-206ENST00000489142 CPA1P15085 419 aa16.21■□□□□ 0.19
VTI1A-206ENST00000489142 LIFRP42702 1097 aa16.21■□□□□ 0.19
VTI1A-206ENST00000489142 CCL23P55773 120 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms