RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 LRWD1Q9UFC0 647 aa29.17■■■□□ 2.26
HLA-C-208ENST00000487245 TXKP42681 527 aa29.17■■■□□ 2.26
HLA-C-208ENST00000487245 ASIC1P78348 528 aa29.17■■■□□ 2.26
HLA-C-208ENST00000487245 SV2BQ7L1I2 683 aa29.17■■■□□ 2.26
HLA-C-208ENST00000487245 FBXO41Q8TF61 875 aa29.17■■■□□ 2.26
HLA-C-208ENST00000487245 P2RX5Q93086 422 aa29.17■■■□□ 2.26
HLA-C-208ENST00000487245 MTMR8Q96EF0 704 aa29.17■■■□□ 2.26
HLA-C-208ENST00000487245 LRRC27Q9C0I9 530 aa29.17■■■□□ 2.26
HLA-C-208ENST00000487245 SASH3O75995 380 aa29.16■■■□□ 2.26
HLA-C-208ENST00000487245 MEA1Q16626 185 aa29.16■■■□□ 2.26
HLA-C-208ENST00000487245 CUL5Q93034 780 aa29.16■■■□□ 2.26
HLA-C-208ENST00000487245 SLF1Q9BQI6 1058 aa29.16■■■□□ 2.26
HLA-C-208ENST00000487245 REXO2Q9Y3B8 237 aaKnown RBP29.16■■■□□ 2.26
HLA-C-208ENST00000487245 MPHOSPH10O00566 681 aaKnown RBP29.15■■■□□ 2.26
HLA-C-208ENST00000487245 ZBTB5O15062 677 aa29.15■■■□□ 2.26
HLA-C-208ENST00000487245 CCDC96Q2M329 555 aa29.15■■■□□ 2.26
HLA-C-208ENST00000487245 STRIP1Q5VSL9 837 aa29.15■■■□□ 2.26
HLA-C-208ENST00000487245 MSL3Q8N5Y2 521 aaKnown RBP29.15■■■□□ 2.26
HLA-C-208ENST00000487245 FUT8Q9BYC5 575 aa29.15■■■□□ 2.26
HLA-C-208ENST00000487245 HAUS4Q9H6D7 363 aa29.15■■■□□ 2.26
HLA-C-208ENST00000487245 ANKZF1Q9H8Y5 726 aa29.15■■■□□ 2.26
HLA-C-208ENST00000487245 NPM3O75607 178 aaKnown RBP29.14■■■□□ 2.26
HLA-C-208ENST00000487245 TUBBP07437 444 aa29.14■■■□□ 2.26
HLA-C-208ENST00000487245 CLK2P49760 499 aaKnown RBP29.14■■■□□ 2.26
HLA-C-208ENST00000487245 AMPD2Q01433 879 aa29.14■■■□□ 2.26
HLA-C-208ENST00000487245 CDK5RAP3Q96JB5 506 aa29.14■■■□□ 2.26
HLA-C-208ENST00000487245 CHP1Q99653 195 aa29.14■■■□□ 2.26
HLA-C-208ENST00000487245 TTYH3Q9C0H2 523 aa29.14■■■□□ 2.26
HLA-C-208ENST00000487245 COL11A2P13942 1736 aaPredicted RBP29.14■■■□□ 2.26
HLA-C-208ENST00000487245 PVALEFA0A1B0GWK0 134 aa29.14■■■□□ 2.26
HLA-C-208ENST00000487245 GCFC2P16383 781 aaKnown RBP29.14■■■□□ 2.26
HLA-C-208ENST00000487245 STYK1Q6J9G0 422 aa29.14■■■□□ 2.26
HLA-C-208ENST00000487245 ZNF622Q969S3 477 aaKnown RBP eCLIP29.14■■■□□ 2.26
HLA-C-208ENST00000487245 MKL1Q969V6 931 aa29.14■■■□□ 2.26
HLA-C-208ENST00000487245 GRB10Q13322 594 aa29.13■■■□□ 2.25
HLA-C-208ENST00000487245 TSR1Q2NL82 804 aaKnown RBP29.13■■■□□ 2.25
HLA-C-208ENST00000487245 CSGALNACT2Q8N6G5 542 aa29.13■■■□□ 2.25
HLA-C-208ENST00000487245 IQCDQ96DY2 449 aa29.13■■■□□ 2.25
HLA-C-208ENST00000487245 IDI2Q9BXS1 227 aa29.13■■■□□ 2.25
HLA-C-208ENST00000487245 NYAP2Q9P242 653 aa29.13■■■□□ 2.25
HLA-C-208ENST00000487245 FIGNQ5HY92 759 aa29.12■■■□□ 2.25
HLA-C-208ENST00000487245 WDR59Q6PJI9 974 aa29.12■■■□□ 2.25
HLA-C-208ENST00000487245 CLEC10AQ8IUN9 316 aa29.12■■■□□ 2.25
HLA-C-208ENST00000487245 DCAF4Q8WV16 495 aa29.12■■■□□ 2.25
HLA-C-208ENST00000487245 TUBGCP2Q9BSJ2 902 aa29.12■■■□□ 2.25
HLA-C-208ENST00000487245 MYH4Q9Y623 1939 aa29.12■■■□□ 2.25
HLA-C-208ENST00000487245 PSMD14O00487 310 aa29.12■■■□□ 2.25
HLA-C-208ENST00000487245 MAP2K7O14733 419 aa29.12■■■□□ 2.25
HLA-C-208ENST00000487245 APBA3O96018 575 aa29.12■■■□□ 2.25
HLA-C-208ENST00000487245 NFIAQ12857 509 aa29.12■■■□□ 2.25
HLA-C-208ENST00000487245 LONRF2Q1L5Z9 754 aa29.12■■■□□ 2.25
HLA-C-208ENST00000487245 KRT79Q5XKE5 535 aa29.12■■■□□ 2.25
HLA-C-208ENST00000487245 TTBK2Q6IQ55 1244 aa29.12■■■□□ 2.25
HLA-C-208ENST00000487245 PI4KBQ9UBF8 816 aa29.12■■■□□ 2.25
HLA-C-208ENST00000487245 TDP2O95551 362 aa29.11■■■□□ 2.25
HLA-C-208ENST00000487245 ABL1P00519 1130 aa29.11■■■□□ 2.25
HLA-C-208ENST00000487245 TNNI2P48788 182 aa29.11■■■□□ 2.25
HLA-C-208ENST00000487245 ATP2B2Q01814 1243 aa29.11■■■□□ 2.25
HLA-C-208ENST00000487245 ZSCAN29Q8IWY8 852 aaPredicted RBP29.11■■■□□ 2.25
HLA-C-208ENST00000487245 KANSL2Q9H9L4 492 aa29.11■■■□□ 2.25
HLA-C-208ENST00000487245 PUF60Q9UHX1 559 aaKnown RBP29.11■■■□□ 2.25
HLA-C-208ENST00000487245 SLC37A4O43826 429 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 EDIL3O43854 480 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 KRT83P78385 493 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 CDK17Q00537 523 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 UNC13DQ70J99 1090 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 C2CD5Q86YS7 1000 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 PNMA5Q96PV4 448 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 PSTPIP2Q9H939 334 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 DBNDD1Q9H9R9 158 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 BLOC1S4Q9NUP1 217 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 MYO6Q9UM54 1294 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 A0A1W2PQJ5 194 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 CTAGE15A4D2H0 777 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 PPP1R11O60927 126 aaPredicted RBP29.1■■■□□ 2.25
HLA-C-208ENST00000487245 CTAGE8P0CG41 777 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 STK4Q13043 487 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 TAF3Q5VWG9 929 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 CTAGE6Q86UF2 777 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 CTAGE4Q8IX94 777 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 LARP4BQ92615 738 aaKnown RBP29.1■■■□□ 2.25
HLA-C-208ENST00000487245 ERGIC2Q96RQ1 377 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 ADAMTSL1Q8N6G6 1762 aa29.1■■■□□ 2.25
HLA-C-208ENST00000487245 H0YIN7 160 aa29.09■■■□□ 2.25
HLA-C-208ENST00000487245 SLC26A4O43511 780 aa29.09■■■□□ 2.25
HLA-C-208ENST00000487245 ZBED6P86452 979 aa29.09■■■□□ 2.25
HLA-C-208ENST00000487245 ANKRD40Q6AI12 368 aa29.09■■■□□ 2.25
HLA-C-208ENST00000487245 CCDC170Q8IYT3 715 aa29.09■■■□□ 2.25
HLA-C-208ENST00000487245 B4DLN1 442 aa29.08■■■□□ 2.25
HLA-C-208ENST00000487245 USP17L10C9JJH3 530 aa29.08■■■□□ 2.25
HLA-C-208ENST00000487245 ERLIN1O75477 346 aa29.08■■■□□ 2.25
HLA-C-208ENST00000487245 CYP2C19P33261 490 aa29.08■■■□□ 2.25
HLA-C-208ENST00000487245 HERVK_113P62684 666 aa29.08■■■□□ 2.25
HLA-C-208ENST00000487245 SMC1AQ14683 1233 aaKnown RBP29.08■■■□□ 2.25
HLA-C-208ENST00000487245 CERKLQ49MI3 558 aaPredicted RBP29.08■■■□□ 2.25
HLA-C-208ENST00000487245 DACT2Q5SW24 774 aa29.08■■■□□ 2.25
HLA-C-208ENST00000487245 EHBP1Q8NDI1 1231 aa29.08■■■□□ 2.25
HLA-C-208ENST00000487245 RAD54LQ92698 747 aa29.08■■■□□ 2.25
HLA-C-208ENST00000487245 CNOT6LQ96LI5 555 aaKnown RBP29.08■■■□□ 2.25
HLA-C-208ENST00000487245 TRIM34Q9BYJ4 488 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms