RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 H2AFB2P0C5Z0 115 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 NOS3P29474 1203 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 RECQLP46063 649 aaPredicted RBP6.81□□□□□ -1.32
COPA-203ENST00000481040 OCRLQ01968 901 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 KLF1Q13351 362 aaPredicted RBP6.81□□□□□ -1.32
COPA-203ENST00000481040 MORC3Q14149 939 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 PCBP2Q15366 365 aaKnown RBP eCLIP6.81□□□□□ -1.32
COPA-203ENST00000481040 HSP90AB4PQ58FF6 505 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 TMEM240Q5SV17 173 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 HDGFL2Q7Z4V5 671 aaPredicted RBP6.81□□□□□ -1.32
COPA-203ENST00000481040 C11orf74Q86VG3 221 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 C12orf50Q8NA57 414 aaPredicted RBP6.81□□□□□ -1.32
COPA-203ENST00000481040 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.81□□□□□ -1.32
COPA-203ENST00000481040 CHTF18Q8WVB6 975 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 TP53INP1Q96A56 240 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 MEGF10Q96KG7 1140 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 SARGQ9BW04 601 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 FAM105AQ9NUU6 356 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 B4GALT6Q9UBX8 382 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 USP25Q9UHP3 1055 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 USP21Q9UK80 565 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 ZBTB21Q9ULJ3 1066 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 GIT1Q9Y2X7 761 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 COQ6Q9Y2Z9 468 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 ACTL7BQ9Y614 415 aa6.81□□□□□ -1.32
COPA-203ENST00000481040 CCDC189A1A4V9 331 aa6.8□□□□□ -1.32
COPA-203ENST00000481040 TIAF1O95411 115 aa6.8□□□□□ -1.32
COPA-203ENST00000481040 FOSP01100 380 aaPredicted RBP6.8□□□□□ -1.32
COPA-203ENST00000481040 CKMP06732 381 aa6.8□□□□□ -1.32
COPA-203ENST00000481040 THBDP07204 575 aa6.8□□□□□ -1.32
COPA-203ENST00000481040 GRIK1P39086 918 aa6.8□□□□□ -1.32
COPA-203ENST00000481040 KPNA1P52294 538 aaPredicted RBP6.8□□□□□ -1.32
COPA-203ENST00000481040 RGL3Q3MIN7 710 aa6.8□□□□□ -1.32
COPA-203ENST00000481040 ACBD5Q5T8D3 534 aaPredicted RBP6.8□□□□□ -1.32
COPA-203ENST00000481040 IL31Q6EBC2 164 aa6.8□□□□□ -1.32
COPA-203ENST00000481040 ACAD11Q709F0 780 aa6.8□□□□□ -1.32
COPA-203ENST00000481040 CHST14Q8NCH0 376 aa6.8□□□□□ -1.32
COPA-203ENST00000481040 PJA1Q8NG27 643 aa6.8□□□□□ -1.32
COPA-203ENST00000481040 WFDC12Q8WWY7 111 aa6.8□□□□□ -1.32
COPA-203ENST00000481040 COPS5Q92905 334 aa6.8□□□□□ -1.32
COPA-203ENST00000481040 CLIP3Q96DZ5 547 aa6.8□□□□□ -1.32
COPA-203ENST00000481040 RNF112Q9ULX5 631 aa6.8□□□□□ -1.32
COPA-203ENST00000481040 NPFFR2Q9Y5X5 522 aa6.8□□□□□ -1.32
COPA-203ENST00000481040 ST14Q9Y5Y6 855 aa6.8□□□□□ -1.32
COPA-203ENST00000481040 WASHC2AQ641Q2 1341 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.79□□□□□ -1.32
COPA-203ENST00000481040 H0Y8X5 98 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 LRRN2O75325 713 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 SLITRK5O94991 958 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 SRGAP2CP0DJJ0 459 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 ATP2A2P16615 1042 aaKnown RBP6.79□□□□□ -1.32
COPA-203ENST00000481040 CYP2C19P33261 490 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 IREB2P48200 963 aaKnown RBP6.79□□□□□ -1.32
COPA-203ENST00000481040 NEK3P51956 506 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 SESN3P58005 492 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 POU4F1Q01851 419 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 PICALMQ13492 652 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 GTF2H3Q13889 308 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 GBX1Q14549 363 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 TMEM177Q53S58 311 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 PNMA8AQ86V59 439 aaPredicted RBP6.79□□□□□ -1.32
COPA-203ENST00000481040 CLRN3Q8NCR9 226 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 C2CD4AQ8NCU7 369 aaPredicted RBP6.79□□□□□ -1.32
COPA-203ENST00000481040 C1orf162Q8NEQ5 155 aaPredicted RBP6.79□□□□□ -1.32
COPA-203ENST00000481040 PCDH19Q8TAB3 1148 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 NPLOC4Q8TAT6 608 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 FRS2Q8WU20 508 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 FAXDC2Q96IV6 333 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 MCMBPQ9BTE3 642 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 CELF4Q9BZC1 486 aaKnown RBP6.79□□□□□ -1.32
COPA-203ENST00000481040 GPR27Q9NS67 375 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 TAGLN3Q9UI15 199 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 RCAN3Q9UKA8 241 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 INTUQ9ULD6 942 aa6.79□□□□□ -1.32
COPA-203ENST00000481040 SCO2A0A1W2PP80 73 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.78□□□□□ -1.32
COPA-203ENST00000481040 STXBP3O00186 592 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 MEFVO15553 781 aaPredicted RBP6.78□□□□□ -1.32
COPA-203ENST00000481040 SIGLEC6O43699 453 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 RBP3P10745 1247 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 LPOP22079 712 aaPredicted RBP6.78□□□□□ -1.32
COPA-203ENST00000481040 MECP2P51608 486 aaKnown RBP6.78□□□□□ -1.32
COPA-203ENST00000481040 PAK1Q13153 545 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 TESK1Q15569 626 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 ARTNQ5T4W7 220 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 PGM2L1Q6PCE3 622 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 LBX2Q6XYB7 198 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 EPM2AIP1Q7L775 607 aaPredicted RBP6.78□□□□□ -1.32
COPA-203ENST00000481040 TMC3Q7Z5M5 1100 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 SPICE1Q8N0Z3 855 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 SLC5A5Q92911 643 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 E2F7Q96AV8 911 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 ALG1Q9BT22 464 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 MAF1Q9H063 256 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 GPRC5CQ9NQ84 441 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 ANLNQ9NQW6 1124 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 CHST7Q9NS84 486 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 C14orf119Q9NWQ9 140 aa6.78□□□□□ -1.32
COPA-203ENST00000481040 TMEFF2Q9UIK5 374 aaPredicted RBP6.78□□□□□ -1.32
COPA-203ENST00000481040 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms