RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 VSIG10LQ86VR7 867 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 ARRDC4Q8NCT1 418 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 GIMAP8Q8ND71 665 aaPredicted RBP5.85□□□□□ -1.47
HDAC6-223ENST00000480525 NPLOC4Q8TAT6 608 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 SYTL5Q8TDW5 730 aaPredicted RBP5.85□□□□□ -1.47
HDAC6-223ENST00000480525 SCFD2Q8WU76 684 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 GPRASP2Q96D09 838 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 NAP1L4Q99733 375 aaKnown RBP5.85□□□□□ -1.47
HDAC6-223ENST00000480525 PDCD2LQ9BRP1 358 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 TMEM106CQ9BVX2 250 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.85□□□□□ -1.47
HDAC6-223ENST00000480525 SLKQ9H2G2 1235 aaPredicted RBP5.85□□□□□ -1.47
HDAC6-223ENST00000480525 PSTPIP2Q9H939 334 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 C6orf50Q9HD87 102 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 GPHNQ9NQX3 736 aaPredicted RBP5.85□□□□□ -1.47
HDAC6-223ENST00000480525 PXMP2Q9NR77 195 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 DDX20Q9UHI6 824 aaKnown RBP5.85□□□□□ -1.47
HDAC6-223ENST00000480525 TPCN1Q9ULQ1 816 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 ALPK3Q96L96 1907 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 SOWAHBA6NEL2 793 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 MOXD2PA6NHM9 499 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 DNM1LO00429 736 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 CABYRO75952 493 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 COL6A1P12109 1028 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 CCL5P13501 91 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 CYP2B6P20813 491 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 SREBF1P36956 1147 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 USP11P51784 963 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 GJA9P57773 515 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 SETQ01105 290 aaPredicted RBP5.84□□□□□ -1.47
HDAC6-223ENST00000480525 SSRP1Q08945 709 aaKnown RBP5.84□□□□□ -1.47
HDAC6-223ENST00000480525 CUL4AQ13619 759 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 ACVR2BQ13705 512 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 ME3Q16798 604 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 GNPTABQ3T906 1256 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 DUSP28Q4G0W2 176 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 WWC2Q6AWC2 1192 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 CCDC62Q6P9F0 684 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 CCDC174Q6PII3 467 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 NSMFQ6X4W1 530 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 CCDC144CPQ8IYA2 1237 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 PCSK9Q8NBP7 692 aaKnown RBP5.84□□□□□ -1.47
HDAC6-223ENST00000480525 RMDN3Q96TC7 470 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 MYL10Q9BUA6 226 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 LRRC2Q9BYS8 371 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.84□□□□□ -1.47
HDAC6-223ENST00000480525 FLRT1Q9NZU1 646 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 DAXXQ9UER7 740 aaPredicted RBP5.84□□□□□ -1.47
HDAC6-223ENST00000480525 FAM184BQ9ULE4 1060 aa5.84□□□□□ -1.47
HDAC6-223ENST00000480525 GNEQ9Y223 722 aaKnown RBP5.84□□□□□ -1.47
HDAC6-223ENST00000480525 V9GY48 417 aaPredicted RBP5.84□□□□□ -1.47
HDAC6-223ENST00000480525 MKI67P46013 3256 aaKnown RBP5.84□□□□□ -1.47
HDAC6-223ENST00000480525 NFASCO94856 1347 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 ELP1O95163 1332 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 CYP3A7-CYP3A51PA0A087WV96 503 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 PTPDC1A2A3K4 754 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 A6NJR5 290 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 SPDYE3A6NKU9 549 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 TBX3O15119 743 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 FIBPO43427 364 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 ADAMTS4O75173 837 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 RPLP2P05387 115 aaKnown RBP5.83□□□□□ -1.48
HDAC6-223ENST00000480525 PGK2P07205 417 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 NR3C2P08235 984 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 RARBP10826 455 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 CPA1P15085 419 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 ELNP15502 786 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 GCFC2P16383 781 aaKnown RBP5.83□□□□□ -1.48
HDAC6-223ENST00000480525 CYP3A7P24462 503 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 CCND2P30279 289 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 TRAPPC10P48553 1259 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 ADCY7P51828 1080 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 NAPAP54920 295 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 PTPN11Q06124 597 aaPredicted RBP5.83□□□□□ -1.48
HDAC6-223ENST00000480525 TTLL4Q14679 1199 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 PGM5Q15124 567 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 NPY5RQ15761 445 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 USH1GQ495M9 461 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 BRDTQ58F21 947 aaPredicted RBP5.83□□□□□ -1.48
HDAC6-223ENST00000480525 WDR78Q5VTH9 848 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 CCSAPQ6IQ19 270 aaPredicted RBP5.83□□□□□ -1.48
HDAC6-223ENST00000480525 TYW1BQ6NUM6 668 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 TAPT1Q6NXT6 567 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 SLC30A10Q6XR72 485 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 RNF180Q86T96 592 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 SESTD1Q86VW0 696 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 HOMER1Q86YM7 354 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 REXO1Q8N1G1 1221 aaKnown RBP5.83□□□□□ -1.48
HDAC6-223ENST00000480525 NSUN7Q8NE18 718 aaKnown RBP5.83□□□□□ -1.48
HDAC6-223ENST00000480525 KLHDC9Q8NEP7 349 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 U2AF1L4Q8WU68 220 aaKnown RBP5.83□□□□□ -1.48
HDAC6-223ENST00000480525 TCEANC2Q96MN5 208 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 MBOAT7Q96N66 472 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 TOX2Q96NM4 488 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 PHF20Q9BVI0 1012 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 RNF208Q9H0X6 261 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 SPC25Q9HBM1 224 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 HOMER2Q9NSB8 354 aa5.83□□□□□ -1.48
HDAC6-223ENST00000480525 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.83□□□□□ -1.48
HDAC6-223ENST00000480525 ISY1Q9ULR0 285 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms