RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 CNOT6LQ96LI5 555 aaKnown RBP23.09■■□□□ 1.29
TMED4-204ENST00000477639 NAPGQ99747 312 aaPredicted RBP23.09■■□□□ 1.29
TMED4-204ENST00000477639 RIC8AQ9NPQ8 531 aa23.09■■□□□ 1.29
TMED4-204ENST00000477639 USP40Q9NVE5 1235 aa23.09■■□□□ 1.29
TMED4-204ENST00000477639 PNMA6FA0A0J9YX94 578 aa23.08■■□□□ 1.29
TMED4-204ENST00000477639 PES1O00541 588 aaKnown RBP23.08■■□□□ 1.29
TMED4-204ENST00000477639 SHMT1P34896 483 aa23.08■■□□□ 1.29
TMED4-204ENST00000477639 PDIA5Q14554 519 aa23.08■■□□□ 1.29
TMED4-204ENST00000477639 MEA1Q16626 185 aa23.08■■□□□ 1.29
TMED4-204ENST00000477639 ADGRF4Q8IZF3 695 aa23.08■■□□□ 1.29
TMED4-204ENST00000477639 NUP58Q9BVL2 599 aa23.08■■□□□ 1.29
TMED4-204ENST00000477639 SEMA6BQ9H3T3 888 aa23.08■■□□□ 1.29
TMED4-204ENST00000477639 SERPINB13Q9UIV8 391 aa23.08■■□□□ 1.29
TMED4-204ENST00000477639 CD2APQ9Y5K6 639 aa23.08■■□□□ 1.29
TMED4-204ENST00000477639 MYMKA6NI61 221 aa23.07■■□□□ 1.28
TMED4-204ENST00000477639 PPP1R11O60927 126 aaPredicted RBP23.07■■□□□ 1.28
TMED4-204ENST00000477639 TERF2Q15554 542 aa23.07■■□□□ 1.28
TMED4-204ENST00000477639 MIIPQ5JXC2 388 aa23.07■■□□□ 1.28
TMED4-204ENST00000477639 CENPPQ6IPU0 288 aa23.07■■□□□ 1.28
TMED4-204ENST00000477639 ZSCAN29Q8IWY8 852 aaPredicted RBP23.07■■□□□ 1.28
TMED4-204ENST00000477639 RETREG2Q8NC44 543 aa23.07■■□□□ 1.28
TMED4-204ENST00000477639 HPS3Q969F9 1004 aa23.07■■□□□ 1.28
TMED4-204ENST00000477639 PVALEFA0A1B0GWK0 134 aa23.07■■□□□ 1.28
TMED4-204ENST00000477639 CLK2P49760 499 aaKnown RBP23.07■■□□□ 1.28
TMED4-204ENST00000477639 TBC1D8BQ0IIM8 1120 aa23.07■■□□□ 1.28
TMED4-204ENST00000477639 MCM6Q14566 821 aa23.07■■□□□ 1.28
TMED4-204ENST00000477639 ST7Q9NRC1 585 aa23.07■■□□□ 1.28
TMED4-204ENST00000477639 UTRNP46939 3433 aa23.07■■□□□ 1.28
TMED4-204ENST00000477639 TBC1D8O95759 1140 aa23.06■■□□□ 1.28
TMED4-204ENST00000477639 TMEM266Q2M3C6 531 aa23.06■■□□□ 1.28
TMED4-204ENST00000477639 UNC13DQ70J99 1090 aa23.06■■□□□ 1.28
TMED4-204ENST00000477639 EEF2KMTQ96G04 330 aa23.06■■□□□ 1.28
TMED4-204ENST00000477639 MXD3Q9BW11 206 aa23.06■■□□□ 1.28
TMED4-204ENST00000477639 ZC3H12CQ9C0D7 883 aaKnown RBP23.06■■□□□ 1.28
TMED4-204ENST00000477639 PUF60Q9UHX1 559 aaKnown RBP23.06■■□□□ 1.28
TMED4-204ENST00000477639 DCAF8L1A6NGE4 600 aa23.05■■□□□ 1.28
TMED4-204ENST00000477639 KLK7P49862 253 aa23.05■■□□□ 1.28
TMED4-204ENST00000477639 HERVK_113P62684 666 aa23.05■■□□□ 1.28
TMED4-204ENST00000477639 TSR1Q2NL82 804 aaKnown RBP23.05■■□□□ 1.28
TMED4-204ENST00000477639 PPP4R3AQ6IN85 833 aa23.05■■□□□ 1.28
TMED4-204ENST00000477639 TTBK2Q6IQ55 1244 aa23.05■■□□□ 1.28
TMED4-204ENST00000477639 ZSWIM4Q9H7M6 989 aa23.05■■□□□ 1.28
TMED4-204ENST00000477639 SLC39A2Q9NP94 309 aa23.05■■□□□ 1.28
TMED4-204ENST00000477639 MTIF2P46199 727 aaKnown RBP23.05■■□□□ 1.28
TMED4-204ENST00000477639 CDC42EP5Q6NZY7 148 aa23.05■■□□□ 1.28
TMED4-204ENST00000477639 ZNF662Q6ZS27 426 aa23.05■■□□□ 1.28
TMED4-204ENST00000477639 LARP4BQ92615 738 aaKnown RBP23.05■■□□□ 1.28
TMED4-204ENST00000477639 RAD54LQ92698 747 aa23.05■■□□□ 1.28
TMED4-204ENST00000477639 ERGIC2Q96RQ1 377 aa23.05■■□□□ 1.28
TMED4-204ENST00000477639 NOC4LQ9BVI4 516 aaKnown RBP23.05■■□□□ 1.28
TMED4-204ENST00000477639 AGPAT5Q9NUQ2 364 aa23.05■■□□□ 1.28
TMED4-204ENST00000477639 ANKRD31Q8N7Z5 1873 aa23.04■■□□□ 1.28
TMED4-204ENST00000477639 ZBED6P86452 979 aa23.04■■□□□ 1.28
TMED4-204ENST00000477639 AMPD2Q01433 879 aa23.04■■□□□ 1.28
TMED4-204ENST00000477639 WHAMMP3Q1A5X7 153 aa23.04■■□□□ 1.28
TMED4-204ENST00000477639 TMEM119Q4V9L6 283 aa23.04■■□□□ 1.28
TMED4-204ENST00000477639 MTMR8Q96EF0 704 aa23.04■■□□□ 1.28
TMED4-204ENST00000477639 NUDT12Q9BQG2 462 aa23.04■■□□□ 1.28
TMED4-204ENST00000477639 RAB34Q9BZG1 259 aa23.04■■□□□ 1.28
TMED4-204ENST00000477639 UBXN6Q9BZV1 441 aa23.04■■□□□ 1.28
TMED4-204ENST00000477639 HAUS4Q9H6D7 363 aa23.04■■□□□ 1.28
TMED4-204ENST00000477639 ANKZF1Q9H8Y5 726 aa23.04■■□□□ 1.28
TMED4-204ENST00000477639 TRIM10Q9UDY6 481 aa23.04■■□□□ 1.28
TMED4-204ENST00000477639 NKRFO15226 690 aaKnown RBP eCLIP23.03■■□□□ 1.28
TMED4-204ENST00000477639 SASH3O75995 380 aa23.03■■□□□ 1.28
TMED4-204ENST00000477639 SCNN1DP51172 638 aa23.03■■□□□ 1.28
TMED4-204ENST00000477639 TUBB4BP68371 445 aa23.03■■□□□ 1.28
TMED4-204ENST00000477639 UBE2SQ16763 222 aa23.03■■□□□ 1.28
TMED4-204ENST00000477639 DOK7Q18PE1 504 aa23.03■■□□□ 1.28
TMED4-204ENST00000477639 FIGNQ5HY92 759 aa23.03■■□□□ 1.28
TMED4-204ENST00000477639 HHIPL2Q6UWX4 724 aa23.03■■□□□ 1.28
TMED4-204ENST00000477639 A0A1W2PQJ5 194 aa23.03■■□□□ 1.28
TMED4-204ENST00000477639 POTEMA6NI47 508 aa23.03■■□□□ 1.28
TMED4-204ENST00000477639 TNNI2P48788 182 aa23.03■■□□□ 1.28
TMED4-204ENST00000477639 BRD3Q15059 726 aa23.03■■□□□ 1.28
TMED4-204ENST00000477639 GPATCH4Q5T3I0 446 aaKnown RBP23.03■■□□□ 1.28
TMED4-204ENST00000477639 APOBEC3HQ6NTF7 200 aaKnown RBP23.03■■□□□ 1.28
TMED4-204ENST00000477639 MSANTD4Q8NCY6 345 aa23.03■■□□□ 1.28
TMED4-204ENST00000477639 CDK5RAP3Q96JB5 506 aa23.03■■□□□ 1.28
TMED4-204ENST00000477639 ARFGAP3Q9NP61 516 aa23.03■■□□□ 1.28
TMED4-204ENST00000477639 GREB1LQ9C091 1923 aaPredicted RBP23.02■■□□□ 1.28
TMED4-204ENST00000477639 TRIM21P19474 475 aaKnown RBP23.02■■□□□ 1.28
TMED4-204ENST00000477639 KCNK18Q7Z418 384 aa23.02■■□□□ 1.28
TMED4-204ENST00000477639 GUF1Q8N442 669 aaKnown RBP23.02■■□□□ 1.28
TMED4-204ENST00000477639 SNX29Q8TEQ0 813 aa23.02■■□□□ 1.28
TMED4-204ENST00000477639 GUCA1BQ9UMX6 200 aa23.02■■□□□ 1.28
TMED4-204ENST00000477639 CCDC151A5D8V7 595 aa23.01■■□□□ 1.27
TMED4-204ENST00000477639 PSMD14O00487 310 aa23.01■■□□□ 1.27
TMED4-204ENST00000477639 TFRCP02786 760 aaKnown RBP23.01■■□□□ 1.27
TMED4-204ENST00000477639 KRT83P78385 493 aa23.01■■□□□ 1.27
TMED4-204ENST00000477639 EHHADHQ08426 723 aa23.01■■□□□ 1.27
TMED4-204ENST00000477639 KRT79Q5XKE5 535 aa23.01■■□□□ 1.27
TMED4-204ENST00000477639 HAS1Q92839 578 aa23.01■■□□□ 1.27
TMED4-204ENST00000477639 CUL5Q93034 780 aa23.01■■□□□ 1.27
TMED4-204ENST00000477639 RAB21Q9UL25 225 aa23.01■■□□□ 1.27
TMED4-204ENST00000477639 MYO6Q9UM54 1294 aa23.01■■□□□ 1.27
TMED4-204ENST00000477639 USP17L10C9JJH3 530 aa23.01■■□□□ 1.27
TMED4-204ENST00000477639 POTEB2H3BUK9 544 aa23.01■■□□□ 1.27
TMED4-204ENST00000477639 ZBTB5O15062 677 aa23.01■■□□□ 1.27
TMED4-204ENST00000477639 KIF20AO95235 890 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms