RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SSRP1Q08945 709 aaKnown RBP16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 ME3Q16798 604 aa16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 ANO1Q5XXA6 986 aa16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 EEPD1Q7L9B9 569 aa16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 FCHSD1Q86WN1 690 aa16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 TRIM22Q8IYM9 498 aa16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 ZNF713Q8N859 430 aaPredicted RBP16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 TBC1D32Q96NH3 1257 aa16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 IWS1Q96ST2 819 aa16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 BARHL2Q9NY43 387 aa16.71■□□□□ 0.27
SQSTM1-205ENST00000464493 STXBP3O00186 592 aa16.7■□□□□ 0.26
SQSTM1-205ENST00000464493 MEIS2O14770 477 aa16.7■□□□□ 0.26
SQSTM1-205ENST00000464493 EIF2AK2P19525 551 aaKnown RBP16.7■□□□□ 0.26
SQSTM1-205ENST00000464493 RABEP1Q15276 862 aa16.7■□□□□ 0.26
SQSTM1-205ENST00000464493 PKN1Q16512 942 aa16.7■□□□□ 0.26
SQSTM1-205ENST00000464493 CCDC144BQ3MJ40 725 aa16.7■□□□□ 0.26
SQSTM1-205ENST00000464493 PPP1R18Q6NYC8 613 aa16.7■□□□□ 0.26
SQSTM1-205ENST00000464493 USP17L6PQ6QN14 398 aa16.7■□□□□ 0.26
SQSTM1-205ENST00000464493 SMARCC2Q8TAQ2 1214 aa16.7■□□□□ 0.26
SQSTM1-205ENST00000464493 VTA1Q9NP79 307 aa16.7■□□□□ 0.26
SQSTM1-205ENST00000464493 PXMP2Q9NR77 195 aa16.7■□□□□ 0.26
SQSTM1-205ENST00000464493 LIMCH1Q9UPQ0 1083 aa16.7■□□□□ 0.26
SQSTM1-205ENST00000464493 CDKL5O76039 1030 aa16.69■□□□□ 0.26
SQSTM1-205ENST00000464493 RARBP10826 455 aa16.69■□□□□ 0.26
SQSTM1-205ENST00000464493 STXBP2Q15833 593 aa16.69■□□□□ 0.26
SQSTM1-205ENST00000464493 TYW1BQ6NUM6 668 aa16.69■□□□□ 0.26
SQSTM1-205ENST00000464493 TAPT1Q6NXT6 567 aa16.69■□□□□ 0.26
SQSTM1-205ENST00000464493 FBXO16Q8IX29 292 aaPredicted RBP16.69■□□□□ 0.26
SQSTM1-205ENST00000464493 NECAB1Q8N987 351 aa16.69■□□□□ 0.26
SQSTM1-205ENST00000464493 ANKLE1Q8NAG6 615 aa16.69■□□□□ 0.26
SQSTM1-205ENST00000464493 IL27Q8NEV9 243 aa16.69■□□□□ 0.26
SQSTM1-205ENST00000464493 SMCO2A6NFE2 343 aa16.68■□□□□ 0.26
SQSTM1-205ENST00000464493 LARGE1O95461 756 aa16.68■□□□□ 0.26
SQSTM1-205ENST00000464493 NR3C2P08235 984 aa16.68■□□□□ 0.26
SQSTM1-205ENST00000464493 IQSEC1Q6DN90 963 aa16.68■□□□□ 0.26
SQSTM1-205ENST00000464493 PDCD2LQ9BRP1 358 aa16.68■□□□□ 0.26
SQSTM1-205ENST00000464493 GLT8D2Q9H1C3 349 aa16.68■□□□□ 0.26
SQSTM1-205ENST00000464493 RIC8AQ9NPQ8 531 aa16.68■□□□□ 0.26
SQSTM1-205ENST00000464493 PDGFCQ9NRA1 345 aa16.68■□□□□ 0.26
SQSTM1-205ENST00000464493 MKI67P46013 3256 aaKnown RBP16.67■□□□□ 0.26
SQSTM1-205ENST00000464493 DUSP11O75319 330 aaKnown RBP16.67■□□□□ 0.26
SQSTM1-205ENST00000464493 EIF3JO75822 258 aaKnown RBP16.67■□□□□ 0.26
SQSTM1-205ENST00000464493 DEXIO95424 95 aa16.67■□□□□ 0.26
SQSTM1-205ENST00000464493 ADCYAP1R1P41586 468 aa16.67■□□□□ 0.26
SQSTM1-205ENST00000464493 ADCY7P51828 1080 aa16.67■□□□□ 0.26
SQSTM1-205ENST00000464493 TNFAIP2Q03169 654 aa16.67■□□□□ 0.26
SQSTM1-205ENST00000464493 PGM5Q15124 567 aa16.67■□□□□ 0.26
SQSTM1-205ENST00000464493 UBE2SQ16763 222 aa16.67■□□□□ 0.26
SQSTM1-205ENST00000464493 VSIG10LQ86VR7 867 aa16.67■□□□□ 0.26
SQSTM1-205ENST00000464493 TEX2Q8IWB9 1127 aa16.67■□□□□ 0.26
SQSTM1-205ENST00000464493 ARRDC4Q8NCT1 418 aa16.67■□□□□ 0.26
SQSTM1-205ENST00000464493 CCDC12Q8WUD4 166 aaPredicted RBP16.67■□□□□ 0.26
SQSTM1-205ENST00000464493 GTF3C6Q969F1 213 aa16.67■□□□□ 0.26
SQSTM1-205ENST00000464493 XPNPEP3Q9NQH7 507 aa16.67■□□□□ 0.26
SQSTM1-205ENST00000464493 FRMPD3Q5JV73 1810 aa16.67■□□□□ 0.26
SQSTM1-205ENST00000464493 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.66■□□□□ 0.26
SQSTM1-205ENST00000464493 RBM47A0AV96 593 aaKnown RBP16.66■□□□□ 0.26
SQSTM1-205ENST00000464493 ST18O60284 1047 aa16.66■□□□□ 0.26
SQSTM1-205ENST00000464493 FARP2O94887 1054 aaPredicted RBP16.66■□□□□ 0.26
SQSTM1-205ENST00000464493 CTDNEP1O95476 244 aa16.66■□□□□ 0.26
SQSTM1-205ENST00000464493 MYCLP12524 364 aaPredicted RBP16.66■□□□□ 0.26
SQSTM1-205ENST00000464493 LENG1Q96BZ8 264 aaPredicted RBP16.66■□□□□ 0.26
SQSTM1-205ENST00000464493 ZSCAN31Q96LW9 406 aaPredicted RBP16.66■□□□□ 0.26
SQSTM1-205ENST00000464493 WDR11Q9BZH6 1224 aa16.66■□□□□ 0.26
SQSTM1-205ENST00000464493 SH3GLB2Q9NR46 395 aa16.66■□□□□ 0.26
SQSTM1-205ENST00000464493 LRRC37A2A6NM11 1700 aa16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 ESYT2A0FGR8 921 aa16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 SPDYE3A6NKU9 549 aa16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 ADCY6O43306 1168 aa16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 PGK1P00558 417 aa16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 MYCNP04198 464 aaPredicted RBP16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 SMPD1P17405 629 aa16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 CCND2P30279 289 aa16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 MNX1P50219 401 aaPredicted RBP16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 GJC2Q5T442 439 aaPredicted RBP16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 SEPT14Q6ZU15 432 aa16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 UBE2Q1Q7Z7E8 422 aa16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 SCFD2Q8WU76 684 aa16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 PAWRQ96IZ0 340 aaKnown RBP16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 ZMYND12Q9H0C1 365 aa16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 C6orf50Q9HD87 102 aa16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 VPS54Q9P1Q0 977 aa16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 PCDHA6Q9UN73 950 aa16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 GNEQ9Y223 722 aaKnown RBP16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 PCDHA8Q9Y5H6 950 aa16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 FRMPD4Q14CM0 1322 aa16.65■□□□□ 0.26
SQSTM1-205ENST00000464493 DNM1LO00429 736 aa16.64■□□□□ 0.25
SQSTM1-205ENST00000464493 FOSP01100 380 aaPredicted RBP16.64■□□□□ 0.25
SQSTM1-205ENST00000464493 GNA11P29992 359 aa16.64■□□□□ 0.25
SQSTM1-205ENST00000464493 MLLT1Q03111 559 aaPredicted RBP16.64■□□□□ 0.25
SQSTM1-205ENST00000464493 LRRC41Q15345 812 aa16.64■□□□□ 0.25
SQSTM1-205ENST00000464493 DUSP28Q4G0W2 176 aa16.64■□□□□ 0.25
SQSTM1-205ENST00000464493 TMEM63BQ5T3F8 832 aa16.64■□□□□ 0.25
SQSTM1-205ENST00000464493 NECAB2Q7Z6G3 386 aa16.64■□□□□ 0.25
SQSTM1-205ENST00000464493 RNF180Q86T96 592 aa16.64■□□□□ 0.25
SQSTM1-205ENST00000464493 CCDC148Q8NFR7 591 aa16.64■□□□□ 0.25
SQSTM1-205ENST00000464493 IL31RAQ8NI17 732 aa16.64■□□□□ 0.25
SQSTM1-205ENST00000464493 DIS3LQ8TF46 1054 aaKnown RBP16.64■□□□□ 0.25
SQSTM1-205ENST00000464493 SPC25Q9HBM1 224 aa16.64■□□□□ 0.25
SQSTM1-205ENST00000464493 SH2B1Q9NRF2 756 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms