RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 FSCN1Q16658 493 aaKnown RBP27.75■■■□□ 2.03
SMKR1-201ENST00000462322 ARHGEF16Q5VV41 709 aa27.75■■■□□ 2.03
SMKR1-201ENST00000462322 SRBD1Q8N5C6 995 aaKnown RBP27.75■■■□□ 2.03
SMKR1-201ENST00000462322 FANCBQ8NB91 859 aa27.75■■■□□ 2.03
SMKR1-201ENST00000462322 VTI1AQ96AJ9 217 aa27.75■■■□□ 2.03
SMKR1-201ENST00000462322 IWS1Q96ST2 819 aa27.75■■■□□ 2.03
SMKR1-201ENST00000462322 PRO3102Q9H379 93 aa27.75■■■□□ 2.03
SMKR1-201ENST00000462322 MAP3K20Q9NYL2 800 aaKnown RBP27.75■■■□□ 2.03
SMKR1-201ENST00000462322 PRKAG2Q9UGJ0 569 aa27.75■■■□□ 2.03
SMKR1-201ENST00000462322 SEC63Q9UGP8 760 aaKnown RBP27.75■■■□□ 2.03
SMKR1-201ENST00000462322 SNX14Q9Y5W7 946 aa27.75■■■□□ 2.03
SMKR1-201ENST00000462322 EIF2AK2P19525 551 aaKnown RBP27.74■■■□□ 2.03
SMKR1-201ENST00000462322 MAGEA10P43363 369 aaPredicted RBP27.74■■■□□ 2.03
SMKR1-201ENST00000462322 GHRHRQ02643 423 aa27.74■■■□□ 2.03
SMKR1-201ENST00000462322 TLE2Q04725 743 aa27.74■■■□□ 2.03
SMKR1-201ENST00000462322 CMTR1Q8N1G2 835 aaKnown RBP27.74■■■□□ 2.03
SMKR1-201ENST00000462322 SAMD3Q8N6K7 520 aa27.74■■■□□ 2.03
SMKR1-201ENST00000462322 SCFD2Q8WU76 684 aa27.74■■■□□ 2.03
SMKR1-201ENST00000462322 JAKMIP1Q96N16 626 aaKnown RBP27.74■■■□□ 2.03
SMKR1-201ENST00000462322 GDF15Q99988 308 aa27.74■■■□□ 2.03
SMKR1-201ENST00000462322 PCDH10Q9P2E7 1040 aa27.74■■■□□ 2.03
SMKR1-201ENST00000462322 GCOM1H8Y6P7 765 aaPredicted RBP27.73■■■□□ 2.03
SMKR1-201ENST00000462322 POLR2MP0CAP2 368 aa27.73■■■□□ 2.03
SMKR1-201ENST00000462322 HOXA13P31271 388 aaPredicted RBP27.73■■■□□ 2.03
SMKR1-201ENST00000462322 FGD1P98174 961 aa27.73■■■□□ 2.03
SMKR1-201ENST00000462322 APOA5Q6Q788 366 aa27.73■■■□□ 2.03
SMKR1-201ENST00000462322 PXMP2Q9NR77 195 aa27.73■■■□□ 2.03
SMKR1-201ENST00000462322 ELP1O95163 1332 aa27.72■■■□□ 2.03
SMKR1-201ENST00000462322 ZEB2O60315 1214 aa27.72■■■□□ 2.03
SMKR1-201ENST00000462322 CPA1P15085 419 aa27.72■■■□□ 2.03
SMKR1-201ENST00000462322 PPP2R5BQ15173 497 aa27.72■■■□□ 2.03
SMKR1-201ENST00000462322 STXBP2Q15833 593 aa27.72■■■□□ 2.03
SMKR1-201ENST00000462322 PRDM5Q9NQX1 630 aaPredicted RBP27.72■■■□□ 2.03
SMKR1-201ENST00000462322 BRPF3Q9ULD4 1205 aa27.72■■■□□ 2.03
SMKR1-201ENST00000462322 PQBP1O60828 265 aaKnown RBP27.71■■■□□ 2.03
SMKR1-201ENST00000462322 RANBP2P49792 3224 aaKnown RBP27.71■■■□□ 2.03
SMKR1-201ENST00000462322 TMTC3Q6ZXV5 915 aa27.71■■■□□ 2.03
SMKR1-201ENST00000462322 CCDC82Q8N4S0 544 aa27.71■■■□□ 2.03
SMKR1-201ENST00000462322 NKRFO15226 690 aaKnown RBP eCLIP27.7■■■□□ 2.02
SMKR1-201ENST00000462322 ZBTB43O43298 467 aa27.7■■■□□ 2.02
SMKR1-201ENST00000462322 NR3C2P08235 984 aa27.7■■■□□ 2.02
SMKR1-201ENST00000462322 TXNP10599 105 aaKnown RBP27.7■■■□□ 2.02
SMKR1-201ENST00000462322 TTLL4Q14679 1199 aa27.7■■■□□ 2.02
SMKR1-201ENST00000462322 BLOC1S2Q6QNY1 142 aa27.7■■■□□ 2.02
SMKR1-201ENST00000462322 CXCL17Q6UXB2 119 aa27.7■■■□□ 2.02
SMKR1-201ENST00000462322 SEPT14Q6ZU15 432 aa27.7■■■□□ 2.02
SMKR1-201ENST00000462322 FCHSD1Q86WN1 690 aa27.7■■■□□ 2.02
SMKR1-201ENST00000462322 LBHD1Q9BQE6 289 aaPredicted RBP27.7■■■□□ 2.02
SMKR1-201ENST00000462322 A0A0U1RQG5 324 aaPredicted RBP27.69■■■□□ 2.02
SMKR1-201ENST00000462322 KLF18A0A0U1RQI7 1052 aa27.69■■■□□ 2.02
SMKR1-201ENST00000462322 EPB41L2O43491 1005 aaKnown RBP27.69■■■□□ 2.02
SMKR1-201ENST00000462322 BMP8BP34820 402 aa27.69■■■□□ 2.02
SMKR1-201ENST00000462322 MDM2Q00987 491 aaPredicted RBP27.69■■■□□ 2.02
SMKR1-201ENST00000462322 OR6J1Q8NGC5 347 aa27.69■■■□□ 2.02
SMKR1-201ENST00000462322 PDLIM7Q9NR12 457 aa27.69■■■□□ 2.02
SMKR1-201ENST00000462322 RBM28Q9NW13 759 aaKnown RBP27.69■■■□□ 2.02
SMKR1-201ENST00000462322 NAP1L2Q9ULW6 460 aaPredicted RBP27.69■■■□□ 2.02
SMKR1-201ENST00000462322 EIF3JO75822 258 aaKnown RBP27.68■■■□□ 2.02
SMKR1-201ENST00000462322 CABYRO75952 493 aa27.68■■■□□ 2.02
SMKR1-201ENST00000462322 PSMA5P28066 241 aa27.68■■■□□ 2.02
SMKR1-201ENST00000462322 RTN1Q16799 776 aa27.68■■■□□ 2.02
SMKR1-201ENST00000462322 PDCD2LQ9BRP1 358 aa27.68■■■□□ 2.02
SMKR1-201ENST00000462322 hCG_1642624A0A1W2PR95 340 aa27.67■■■□□ 2.02
SMKR1-201ENST00000462322 DCDC2CA8MYV0 355 aa27.67■■■□□ 2.02
SMKR1-201ENST00000462322 CLTBP09497 229 aa27.67■■■□□ 2.02
SMKR1-201ENST00000462322 MYCLP12524 364 aaPredicted RBP27.67■■■□□ 2.02
SMKR1-201ENST00000462322 Q6ZUG5 572 aa27.67■■■□□ 2.02
SMKR1-201ENST00000462322 ANKRD33Q7Z3H0 272 aa27.67■■■□□ 2.02
SMKR1-201ENST00000462322 SH3RF1Q7Z6J0 888 aa27.67■■■□□ 2.02
SMKR1-201ENST00000462322 COPS5Q92905 334 aa27.67■■■□□ 2.02
SMKR1-201ENST00000462322 TOX2Q96NM4 488 aa27.67■■■□□ 2.02
SMKR1-201ENST00000462322 UBE2OQ9C0C9 1292 aaKnown RBP27.67■■■□□ 2.02
SMKR1-201ENST00000462322 A0A1W2PPC1 479 aa27.66■■■□□ 2.02
SMKR1-201ENST00000462322 GOLGA8AA7E2F4 631 aa27.66■■■□□ 2.02
SMKR1-201ENST00000462322 GOLGA8BA8MQT2 603 aa27.66■■■□□ 2.02
SMKR1-201ENST00000462322 ARVCFO00192 962 aa27.66■■■□□ 2.02
SMKR1-201ENST00000462322 ARIH2O95376 493 aa27.66■■■□□ 2.02
SMKR1-201ENST00000462322 CASTP20810 708 aaKnown RBP27.66■■■□□ 2.02
SMKR1-201ENST00000462322 CPT1AP50416 773 aa27.66■■■□□ 2.02
SMKR1-201ENST00000462322 BRDTQ58F21 947 aaPredicted RBP27.66■■■□□ 2.02
SMKR1-201ENST00000462322 CUL5Q93034 780 aa27.66■■■□□ 2.02
SMKR1-201ENST00000462322 USP26Q9BXU7 913 aa27.66■■■□□ 2.02
SMKR1-201ENST00000462322 MROH7Q68CQ1 1323 aa27.66■■■□□ 2.02
SMKR1-201ENST00000462322 TRIM43BA6NCK2 446 aa27.65■■■□□ 2.02
SMKR1-201ENST00000462322 RPS6KB1P23443 525 aa27.65■■■□□ 2.02
SMKR1-201ENST00000462322 CDK7P50613 346 aa27.65■■■□□ 2.02
SMKR1-201ENST00000462322 PGM5Q15124 567 aa27.65■■■□□ 2.02
SMKR1-201ENST00000462322 CCDC62Q6P9F0 684 aa27.65■■■□□ 2.02
SMKR1-201ENST00000462322 BRF1Q92994 677 aa27.65■■■□□ 2.02
SMKR1-201ENST00000462322 TRIM43Q96BQ3 446 aaPredicted RBP27.65■■■□□ 2.02
SMKR1-201ENST00000462322 APOBRQ0VD83 1088 aa27.64■■■□□ 2.02
SMKR1-201ENST00000462322 LY6KQ17RY6 165 aa27.64■■■□□ 2.02
SMKR1-201ENST00000462322 VSIG10LQ86VR7 867 aa27.64■■■□□ 2.02
SMKR1-201ENST00000462322 IL31RAQ8NI17 732 aa27.64■■■□□ 2.02
SMKR1-201ENST00000462322 SMARCC2Q8TAQ2 1214 aa27.64■■■□□ 2.02
SMKR1-201ENST00000462322 TMEM39AQ9NV64 488 aa27.64■■■□□ 2.02
SMKR1-201ENST00000462322 POLR3EQ9NVU0 708 aa27.64■■■□□ 2.02
SMKR1-201ENST00000462322 MYL3P08590 195 aa27.63■■■□□ 2.01
SMKR1-201ENST00000462322 CCND2P30279 289 aa27.63■■■□□ 2.01
SMKR1-201ENST00000462322 FXR1P51114 621 aaKnown RBP eCLIP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms