RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 AHDC1Q5TGY3 1603 aaPredicted RBP13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 A0A1W2PQJ5 194 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 ESYT3A0FGR9 886 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 BICDL2A1A5D9 508 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 UBE4AQ14139 1066 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 KCTD19Q17RG1 926 aaPredicted RBP13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 IQCEQ6IPM2 695 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 SMIM5Q71RC9 77 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 RRAGAQ7L523 313 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 GLIS3Q8NEA6 775 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 MTMR8Q96EF0 704 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 MMTAG2Q9BU76 263 aaKnown RBP13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 TSGA10Q9BZW7 698 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 EIF3HO15372 352 aaKnown RBP eCLIP13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 USO1O60763 962 aaKnown RBP13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 ATP1A2P50993 1020 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 GTF2A1P52655 376 aaPredicted RBP13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 CDK17Q00537 523 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 PDCLQ13371 301 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 SH3GLB2Q9NR46 395 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 AKR1B10O60218 316 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 KRT14P02533 472 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 MYL1P05976 194 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 FAM153BP0C7A2 387 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 RASSF7Q02833 373 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 GRM4Q14833 912 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 FAM153CQ494X1 144 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 VWA3BQ502W6 1294 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 CCDC181Q5TID7 509 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 CCDC70Q6NSX1 233 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 DYMQ7RTS9 669 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 ZNF572Q7Z3I7 529 aaPredicted RBP13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 FAM114A1Q8IWE2 563 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 ZIM3Q96PE6 472 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 NDST4Q9H3R1 872 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 STIM2Q9P246 746 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 ARPP21Q9UBL0 812 aaPredicted RBP13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 FAM153AQ9UHL3 310 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 HYOU1Q9Y4L1 999 aa13.03□□□□□ -0.32
PDZRN3-203ENST00000462146 A0A087WUV0 522 aaPredicted RBP13.02□□□□□ -0.32
PDZRN3-203ENST00000462146 OR52Z1P0C646 297 aa13.02□□□□□ -0.32
PDZRN3-203ENST00000462146 SLC1A4P43007 532 aa13.02□□□□□ -0.32
PDZRN3-203ENST00000462146 FIGNQ5HY92 759 aa13.02□□□□□ -0.32
PDZRN3-203ENST00000462146 C7orf25Q9BPX7 421 aa13.02□□□□□ -0.32
PDZRN3-203ENST00000462146 TLR10Q9BXR5 811 aa13.02□□□□□ -0.32
PDZRN3-203ENST00000462146 TCP11L1Q9NUJ3 509 aa13.02□□□□□ -0.32
PDZRN3-203ENST00000462146 BARHL2Q9NY43 387 aa13.02□□□□□ -0.32
PDZRN3-203ENST00000462146 MYH4Q9Y623 1939 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 CPP00450 1065 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 EPHB4P54760 987 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 PPARDQ03181 441 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 BICDL1Q6ZP65 573 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 TXNRD3Q86VQ6 643 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 POTEDQ86YR6 584 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 ATP8A2Q9NTI2 1148 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 GOLGA8KD6RF30 607 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 EBAG9O00559 213 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 GLI1P08151 1106 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 HNRNPH3P31942 346 aaKnown RBP13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 MAGEA1P43355 309 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 CARSP49589 748 aaKnown RBP13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 APBA1Q02410 837 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 TRADDQ15628 312 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 KLHDC7AQ5VTJ3 777 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 FBXW10Q5XX13 1052 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 C8orf74Q6P047 294 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 FBXO33Q7Z6M2 555 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 CCDC24Q8N4L8 307 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 BAP1Q92560 729 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 BSDC1Q9NW68 430 aaPredicted RBP13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 STX8Q9UNK0 236 aa13.02□□□□□ -0.33
PDZRN3-203ENST00000462146 MYMKA6NI61 221 aa13.01□□□□□ -0.33
PDZRN3-203ENST00000462146 LRRC41Q15345 812 aa13.01□□□□□ -0.33
PDZRN3-203ENST00000462146 DAGLBQ8NCG7 672 aa13.01□□□□□ -0.33
PDZRN3-203ENST00000462146 PACSIN2Q9UNF0 486 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-203ENST00000462146 ERLIN2O94905 339 aa13.01□□□□□ -0.33
PDZRN3-203ENST00000462146 LCA5LO95447 670 aa13.01□□□□□ -0.33
PDZRN3-203ENST00000462146 PRPHP41219 470 aa13.01□□□□□ -0.33
PDZRN3-203ENST00000462146 NAPAP54920 295 aa13.01□□□□□ -0.33
PDZRN3-203ENST00000462146 RNASE9P60153 205 aaKnown RBP13.01□□□□□ -0.33
PDZRN3-203ENST00000462146 SBK1Q52WX2 424 aa13.01□□□□□ -0.33
PDZRN3-203ENST00000462146 CENPPQ6IPU0 288 aa13.01□□□□□ -0.33
PDZRN3-203ENST00000462146 ALS2CR12Q96Q35 445 aa13.01□□□□□ -0.33
PDZRN3-203ENST00000462146 NLRC4Q9NPP4 1024 aa13.01□□□□□ -0.33
PDZRN3-203ENST00000462146 NFU1Q9UMS0 254 aa13.01□□□□□ -0.33
PDZRN3-203ENST00000462146 MAST2Q6P0Q8 1798 aa13.01□□□□□ -0.33
PDZRN3-203ENST00000462146 TCP1P17987 556 aaKnown RBP13□□□□□ -0.33
PDZRN3-203ENST00000462146 TXKP42681 527 aa13□□□□□ -0.33
PDZRN3-203ENST00000462146 NAP1L1P55209 391 aaKnown RBP13□□□□□ -0.33
PDZRN3-203ENST00000462146 PDE4CQ08493 712 aa13□□□□□ -0.33
PDZRN3-203ENST00000462146 CCDC47Q96A33 483 aaKnown RBP13□□□□□ -0.33
PDZRN3-203ENST00000462146 CCDC43Q96MW1 224 aaKnown RBP13□□□□□ -0.33
PDZRN3-203ENST00000462146 RUFY1Q96T51 708 aa13□□□□□ -0.33
PDZRN3-203ENST00000462146 BLOC1S4Q9NUP1 217 aa13□□□□□ -0.33
PDZRN3-203ENST00000462146 TMEM260Q9NX78 707 aa13□□□□□ -0.33
PDZRN3-203ENST00000462146 HSF2BPO75031 334 aa13□□□□□ -0.33
PDZRN3-203ENST00000462146 PRLRP16471 622 aa13□□□□□ -0.33
PDZRN3-203ENST00000462146 GUCY2FP51841 1108 aa13□□□□□ -0.33
PDZRN3-203ENST00000462146 ITIH3Q06033 890 aa13□□□□□ -0.33
PDZRN3-203ENST00000462146 GRB10Q13322 594 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms