RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 BICDL2A1A5D9 508 aa21.77■■□□□ 1.08
CNEP1R1-203ENST00000458059 RAD21O60216 631 aa21.77■■□□□ 1.08
CNEP1R1-203ENST00000458059 CCDC181Q5TID7 509 aa21.77■■□□□ 1.08
CNEP1R1-203ENST00000458059 ESYT3A0FGR9 886 aa21.76■■□□□ 1.07
CNEP1R1-203ENST00000458059 CCNI2Q6ZMN8 369 aaPredicted RBP21.76■■□□□ 1.07
CNEP1R1-203ENST00000458059 NEK8Q86SG6 692 aa21.76■■□□□ 1.07
CNEP1R1-203ENST00000458059 AMOTL1Q8IY63 956 aa21.76■■□□□ 1.07
CNEP1R1-203ENST00000458059 EYA3Q99504 573 aa21.76■■□□□ 1.07
CNEP1R1-203ENST00000458059 GOLGA6BA6NDN3 693 aa21.76■■□□□ 1.07
CNEP1R1-203ENST00000458059 RASA1P20936 1047 aa21.76■■□□□ 1.07
CNEP1R1-203ENST00000458059 AMIGO3Q86WK7 504 aa21.76■■□□□ 1.07
CNEP1R1-203ENST00000458059 EHBP1Q8NDI1 1231 aa21.76■■□□□ 1.07
CNEP1R1-203ENST00000458059 CALML4Q96GE6 196 aa21.76■■□□□ 1.07
CNEP1R1-203ENST00000458059 NDST4Q9H3R1 872 aa21.76■■□□□ 1.07
CNEP1R1-203ENST00000458059 AGPSO00116 658 aa21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 SLC37A4O43826 429 aa21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 DNAAF5Q86Y56 855 aa21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 CREG2Q8IUH2 290 aa21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 LRRC47Q8N1G4 583 aaKnown RBP21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 SH3GLB2Q9NR46 395 aa21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 SEC63Q9UGP8 760 aaKnown RBP21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 PACSIN2Q9UNF0 486 aaPredicted RBP21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 SRCAPQ6ZRS2 3230 aa21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 ZSCAN5CA6NGD5 496 aaPredicted RBP21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 USP17L5A8MUK1 530 aa21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 PRPF6O94906 941 aaKnown RBP21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 TUBB4BP68371 445 aa21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 CACNA2D4Q7Z3S7 1137 aa21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 KCNK18Q7Z418 384 aa21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 GNPATO15228 680 aa21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 TACC1O75410 805 aa21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 GNAQP50148 359 aa21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 NUP58Q9BVL2 599 aa21.75■■□□□ 1.07
CNEP1R1-203ENST00000458059 ZC3H4Q9UPT8 1303 aaKnown RBP21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 PALM3A6NDB9 673 aaPredicted RBP21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 USO1O60763 962 aaKnown RBP21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 IVLP07476 585 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 TNNI2P48788 182 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 VWA3BQ502W6 1294 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 KCTD16Q68DU8 428 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 TMED8Q6PL24 325 aaPredicted RBP21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 SV2BQ7L1I2 683 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 NELFCDQ8IXH7 590 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 PLCD3Q8N3E9 789 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 CEP95Q96GE4 821 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 GPCPD1Q9NPB8 672 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 SNX12Q9UMY4 172 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 GOLGA6CA6NDK9 693 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 GOLGA6DP0CG33 693 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 SLC1A4P43007 532 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 MAGEA1P43355 309 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 FAM114A1Q8IWE2 563 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 C6orf50Q9HD87 102 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 GOLGA6AQ9NYA3 693 aa21.74■■□□□ 1.07
CNEP1R1-203ENST00000458059 SLURP2P0DP57 97 aa21.73■■□□□ 1.07
CNEP1R1-203ENST00000458059 GRB10Q13322 594 aa21.73■■□□□ 1.07
CNEP1R1-203ENST00000458059 UBE2SQ16763 222 aa21.73■■□□□ 1.07
CNEP1R1-203ENST00000458059 REXO1Q8N1G1 1221 aaKnown RBP21.73■■□□□ 1.07
CNEP1R1-203ENST00000458059 ZHX3Q9H4I2 956 aa21.73■■□□□ 1.07
CNEP1R1-203ENST00000458059 PICALMQ13492 652 aa21.73■■□□□ 1.07
CNEP1R1-203ENST00000458059 CALCRLQ16602 461 aa21.73■■□□□ 1.07
CNEP1R1-203ENST00000458059 CNNM4Q6P4Q7 775 aa21.73■■□□□ 1.07
CNEP1R1-203ENST00000458059 CCDC170Q8IYT3 715 aa21.73■■□□□ 1.07
CNEP1R1-203ENST00000458059 SPATA4Q8NEY3 305 aa21.73■■□□□ 1.07
CNEP1R1-203ENST00000458059 OSBPL9Q96SU4 736 aa21.73■■□□□ 1.07
CNEP1R1-203ENST00000458059 MKRN1Q9UHC7 482 aaKnown RBP21.73■■□□□ 1.07
CNEP1R1-203ENST00000458059 BTDP43251 543 aa21.72■■□□□ 1.07
CNEP1R1-203ENST00000458059 CDK8P49336 464 aa21.72■■□□□ 1.07
CNEP1R1-203ENST00000458059 PROCA1Q8NCQ7 364 aaPredicted RBP21.72■■□□□ 1.07
CNEP1R1-203ENST00000458059 ZMYND12Q9H0C1 365 aa21.72■■□□□ 1.07
CNEP1R1-203ENST00000458059 SH2D4AQ9H788 454 aa21.72■■□□□ 1.07
CNEP1R1-203ENST00000458059 BLOC1S4Q9NUP1 217 aa21.72■■□□□ 1.07
CNEP1R1-203ENST00000458059 MARCH6O60337 910 aa21.72■■□□□ 1.07
CNEP1R1-203ENST00000458059 FAM98CQ17RN3 349 aaKnown RBP21.72■■□□□ 1.07
CNEP1R1-203ENST00000458059 CLEC4GQ6UXB4 293 aa21.72■■□□□ 1.07
CNEP1R1-203ENST00000458059 KRT25Q7Z3Z0 450 aa21.72■■□□□ 1.07
CNEP1R1-203ENST00000458059 SNX29Q8TEQ0 813 aa21.72■■□□□ 1.07
CNEP1R1-203ENST00000458059 NOC3LQ8WTT2 800 aaKnown RBP21.72■■□□□ 1.07
CNEP1R1-203ENST00000458059 IFT81Q8WYA0 676 aa21.72■■□□□ 1.07
CNEP1R1-203ENST00000458059 MTMR8Q96EF0 704 aa21.72■■□□□ 1.07
CNEP1R1-203ENST00000458059 FTCDO95954 541 aa21.72■■□□□ 1.07
CNEP1R1-203ENST00000458059 C7orf25Q9BPX7 421 aa21.72■■□□□ 1.07
CNEP1R1-203ENST00000458059 F8W031 263 aaPredicted RBP21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 TUBBP07437 444 aa21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 CCT5P48643 541 aa21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 CCDC70Q6NSX1 233 aa21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 TEX11Q8IYF3 940 aa21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 SH2D3CQ8N5H7 860 aa21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 TSEN2Q8NCE0 465 aaKnown RBP21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 FAM76AQ8TAV0 307 aa21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 PNMA5Q96PV4 448 aa21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 FGFBP2Q9BYJ0 223 aa21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 ANKRD2Q9GZV1 360 aa21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 RBM12Q9NTZ6 932 aaKnown RBP21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 SPATA31A1Q5TZJ5 1347 aa21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 AMPD3Q01432 767 aa21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 TRIM58Q8NG06 486 aa21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 LARP4BQ92615 738 aaKnown RBP21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 PLAGL2Q9UPG8 496 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms