RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 VEZTQ9HBM0 779 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 DZANK1Q9NVP4 752 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 POLIQ9UNA4 740 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 COG5Q9UP83 839 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 COL4A6Q14031 1691 aa6.7□□□□□ -1.34
SDCBP-205ENST00000447267 LAMB2P55268 1798 aa6.69□□□□□ -1.34
SDCBP-205ENST00000447267 UBR2Q8IWV8 1755 aa6.69□□□□□ -1.34
SDCBP-205ENST00000447267 KIF20BQ96Q89 1820 aa6.69□□□□□ -1.34
SDCBP-205ENST00000447267 PRR23AA6NEV1 266 aa6.69□□□□□ -1.34
SDCBP-205ENST00000447267 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.69□□□□□ -1.34
SDCBP-205ENST00000447267 FSTP19883 344 aa6.69□□□□□ -1.34
SDCBP-205ENST00000447267 CD68P34810 354 aaPredicted RBP6.69□□□□□ -1.34
SDCBP-205ENST00000447267 PPP1R42Q7Z4L9 355 aa6.69□□□□□ -1.34
SDCBP-205ENST00000447267 ANKRD23Q86SG2 305 aa6.69□□□□□ -1.34
SDCBP-205ENST00000447267 CACTIN-AS1Q8N1I8 211 aa6.69□□□□□ -1.34
SDCBP-205ENST00000447267 IL17REQ8NFR9 667 aa6.69□□□□□ -1.34
SDCBP-205ENST00000447267 SPACA7Q96KW9 195 aa6.69□□□□□ -1.34
SDCBP-205ENST00000447267 PUS7Q96PZ0 661 aaKnown RBP6.69□□□□□ -1.34
SDCBP-205ENST00000447267 UTP14AQ9BVJ6 771 aaKnown RBP6.69□□□□□ -1.34
SDCBP-205ENST00000447267 MUC3BQ9H195 1237 aa6.69□□□□□ -1.34
SDCBP-205ENST00000447267 ALG13Q9NP73 1137 aaKnown RBP6.69□□□□□ -1.34
SDCBP-205ENST00000447267 BSDC1Q9NW68 430 aaPredicted RBP6.69□□□□□ -1.34
SDCBP-205ENST00000447267 CSADQ9Y600 493 aa6.69□□□□□ -1.34
SDCBP-205ENST00000447267 SNCAIPQ9Y6H5 919 aa6.69□□□□□ -1.34
SDCBP-205ENST00000447267 CEMIPQ8WUJ3 1361 aa6.69□□□□□ -1.34
SDCBP-205ENST00000447267 ERVV-1B6SEH8 477 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 H0Y858 1186 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 EREGO14944 169 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 FZD6O60353 706 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 GLB1P16278 677 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 MZF1P28698 734 aaPredicted RBP6.68□□□□□ -1.34
SDCBP-205ENST00000447267 CCND3P30281 292 aaPredicted RBP6.68□□□□□ -1.34
SDCBP-205ENST00000447267 TEFQ10587 303 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 DLGAP5Q15398 846 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 ACAD11Q709F0 780 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 TMC4Q7Z404 712 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 ADSSL1Q8N142 457 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.68□□□□□ -1.34
SDCBP-205ENST00000447267 COA7Q96BR5 231 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 PSMG3-AS1Q96PY0 264 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 PDLIM7Q9NR12 457 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 TLR9Q9NR96 1032 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 FOXD3Q9UJU5 478 aaPredicted RBP6.68□□□□□ -1.34
SDCBP-205ENST00000447267 SOX13Q9UN79 622 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 YBX2Q9Y2T7 364 aaKnown RBP6.68□□□□□ -1.34
SDCBP-205ENST00000447267 PPP2R3BQ9Y5P8 575 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 MTCH2Q9Y6C9 303 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 MAP3K15Q6ZN16 1313 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 TRANK1O15050 2925 aa6.68□□□□□ -1.34
SDCBP-205ENST00000447267 LAMB1P07942 1786 aa6.67□□□□□ -1.34
SDCBP-205ENST00000447267 MED26O95402 600 aa6.67□□□□□ -1.34
SDCBP-205ENST00000447267 IL9P15248 144 aa6.67□□□□□ -1.34
SDCBP-205ENST00000447267 PTPRAP18433 802 aa6.67□□□□□ -1.34
SDCBP-205ENST00000447267 MOGSQ13724 837 aa6.67□□□□□ -1.34
SDCBP-205ENST00000447267 TRIM60Q495X7 471 aa6.67□□□□□ -1.34
SDCBP-205ENST00000447267 C8orf34Q49A92 452 aa6.67□□□□□ -1.34
SDCBP-205ENST00000447267 ERO1BQ86YB8 467 aa6.67□□□□□ -1.34
SDCBP-205ENST00000447267 TRIB2Q92519 343 aa6.67□□□□□ -1.34
SDCBP-205ENST00000447267 ANO2Q9NQ90 1003 aa6.67□□□□□ -1.34
SDCBP-205ENST00000447267 RNF112Q9ULX5 631 aa6.67□□□□□ -1.34
SDCBP-205ENST00000447267 ZNF804BA4D1E1 1349 aa6.67□□□□□ -1.34
SDCBP-205ENST00000447267 ACACBO00763 2458 aa6.66□□□□□ -1.34
SDCBP-205ENST00000447267 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
SDCBP-205ENST00000447267 PDE2AO00408 941 aaPredicted RBP6.66□□□□□ -1.34
SDCBP-205ENST00000447267 SNRPA1P09661 255 aaKnown RBP6.66□□□□□ -1.34
SDCBP-205ENST00000447267 CES1P23141 567 aa6.66□□□□□ -1.34
SDCBP-205ENST00000447267 ZNF211Q13398 564 aaPredicted RBP6.66□□□□□ -1.34
SDCBP-205ENST00000447267 ECM1Q16610 540 aa6.66□□□□□ -1.34
SDCBP-205ENST00000447267 FAM46AQ96IP4 442 aaKnown RBP6.66□□□□□ -1.34
SDCBP-205ENST00000447267 PRMT6Q96LA8 375 aaPredicted RBP6.66□□□□□ -1.34
SDCBP-205ENST00000447267 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.66□□□□□ -1.34
SDCBP-205ENST00000447267 ZKSCAN3Q9BRR0 538 aa6.66□□□□□ -1.34
SDCBP-205ENST00000447267 SLC28A3Q9HAS3 691 aa6.66□□□□□ -1.34
SDCBP-205ENST00000447267 LATS2Q9NRM7 1088 aa6.66□□□□□ -1.34
SDCBP-205ENST00000447267 MSRAQ9UJ68 235 aa6.66□□□□□ -1.34
SDCBP-205ENST00000447267 GJD2Q9UKL4 321 aa6.66□□□□□ -1.34
SDCBP-205ENST00000447267 RRP7AQ9Y3A4 280 aaKnown RBP6.66□□□□□ -1.34
SDCBP-205ENST00000447267 ANKRD11Q6UB99 2663 aaPredicted RBP6.66□□□□□ -1.34
SDCBP-205ENST00000447267 IBTKQ9P2D0 1353 aaPredicted RBP6.66□□□□□ -1.34
SDCBP-205ENST00000447267 MYO9BQ13459 2157 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 LRRC37A2A6NM11 1700 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 BTBD11A6QL63 1104 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 PROB1E7EW31 1015 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 H3BRJ5 948 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 TNFRSF21O75509 655 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 HMOX1P09601 288 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 MYOGP15173 224 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 CYP2B6P20813 491 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 CACNB2Q08289 660 aaPredicted RBP6.65□□□□□ -1.34
SDCBP-205ENST00000447267 PPIL2Q13356 520 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 MAP3K21Q5TCX8 1036 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 PEAR1Q5VY43 1037 aaPredicted RBP6.65□□□□□ -1.34
SDCBP-205ENST00000447267 SLC39A5Q6ZMH5 540 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 KIF6Q6ZMV9 814 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 KLHL23Q8NBE8 558 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 CHAMP1Q96JM3 812 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 PARK7Q99497 189 aaKnown RBP6.65□□□□□ -1.34
SDCBP-205ENST00000447267 CERS4Q9HA82 394 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 DAGLAQ9Y4D2 1042 aa6.65□□□□□ -1.34
SDCBP-205ENST00000447267 COL1A1P02452 1464 aaPredicted RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms