RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 NAA25Q14CX7 972 aa15.43■□□□□ 0.06
VPS52-212ENST00000445902 ENOX2Q16206 610 aaKnown RBP15.43■□□□□ 0.06
VPS52-212ENST00000445902 TDRD12Q587J7 1177 aaKnown RBP15.43■□□□□ 0.06
VPS52-212ENST00000445902 ANKRD20A8PQ5CZ79 823 aa15.43■□□□□ 0.06
VPS52-212ENST00000445902 GIMAP8Q8ND71 665 aaPredicted RBP15.43■□□□□ 0.06
VPS52-212ENST00000445902 NOC3LQ8WTT2 800 aaKnown RBP15.43■□□□□ 0.06
VPS52-212ENST00000445902 P2RX5Q93086 422 aa15.43■□□□□ 0.06
VPS52-212ENST00000445902 FAXDC2Q96IV6 333 aa15.43■□□□□ 0.06
VPS52-212ENST00000445902 PLAGL2Q9UPG8 496 aa15.43■□□□□ 0.06
VPS52-212ENST00000445902 BAZ2AQ9UIF9 1905 aaKnown RBP15.43■□□□□ 0.06
VPS52-212ENST00000445902 DISP2A7MBM2 1401 aa15.43■□□□□ 0.06
VPS52-212ENST00000445902 KIF13AQ9H1H9 1805 aa15.43■□□□□ 0.06
VPS52-212ENST00000445902 GMNCA6NCL1 334 aa15.43■□□□□ 0.06
VPS52-212ENST00000445902 HMGB1P1B2RPK0 211 aaPredicted RBP15.43■□□□□ 0.06
VPS52-212ENST00000445902 ARID4AP29374 1257 aaPredicted RBP15.43■□□□□ 0.06
VPS52-212ENST00000445902 PLCB4Q15147 1175 aa15.43■□□□□ 0.06
VPS52-212ENST00000445902 KRT28Q7Z3Y7 464 aa15.43■□□□□ 0.06
VPS52-212ENST00000445902 SRBD1Q8N5C6 995 aaKnown RBP15.43■□□□□ 0.06
VPS52-212ENST00000445902 ESR2Q92731 530 aa15.43■□□□□ 0.06
VPS52-212ENST00000445902 RAD51CO43502 376 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 EZRP15311 586 aaKnown RBP15.42■□□□□ 0.06
VPS52-212ENST00000445902 CCDC155Q8N6L0 562 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 NOX5Q96PH1 765 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 ZSCAN10Q96SZ4 725 aaPredicted RBP15.42■□□□□ 0.06
VPS52-212ENST00000445902 LEMD3Q9Y2U8 911 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 PHF20L1A8MW92 1017 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 PALMO75781 387 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 UBA7P41226 1012 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 EVX2Q03828 476 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 ACCSLQ4AC99 568 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 LRCH2Q5VUJ6 765 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 NAIF1Q69YI7 327 aaPredicted RBP15.42■□□□□ 0.06
VPS52-212ENST00000445902 CHADLQ6NUI6 762 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 ZBTB38Q8NAP3 1195 aaPredicted RBP15.42■□□□□ 0.06
VPS52-212ENST00000445902 GPKOWQ92917 476 aaPredicted RBP eCLIP15.42■□□□□ 0.06
VPS52-212ENST00000445902 SGSM3Q96HU1 749 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 TMEM60Q9H2L4 133 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 RNF41Q9H4P4 317 aaPredicted RBP15.42■□□□□ 0.06
VPS52-212ENST00000445902 FAM205AQ6ZU69 1335 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 TIAM2Q8IVF5 1701 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 GCOM1H8Y6P7 765 aaPredicted RBP15.42■□□□□ 0.06
VPS52-212ENST00000445902 UQCRFS1P1P0C7P4 283 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 MYZAPP0CAP1 466 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 PDE6BP35913 854 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 SCTRP47872 440 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 EHHADHQ08426 723 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 DDX17Q92841 729 aaKnown RBP15.42■□□□□ 0.06
VPS52-212ENST00000445902 SEC16BQ96JE7 1060 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 PYM1Q9BRP8 204 aaKnown RBP15.42■□□□□ 0.06
VPS52-212ENST00000445902 TACO1Q9BSH4 297 aaKnown RBP15.42■□□□□ 0.06
VPS52-212ENST00000445902 TMBIM4Q9HC24 238 aa15.42■□□□□ 0.06
VPS52-212ENST00000445902 LMTK3Q96Q04 1460 aa15.41■□□□□ 0.06
VPS52-212ENST00000445902 DCDC2CA8MYV0 355 aa15.41■□□□□ 0.06
VPS52-212ENST00000445902 RHOBTB3O94955 611 aa15.41■□□□□ 0.06
VPS52-212ENST00000445902 GBP2P32456 591 aaPredicted RBP15.41■□□□□ 0.06
VPS52-212ENST00000445902 LONP1P36776 959 aaKnown RBP15.41■□□□□ 0.06
VPS52-212ENST00000445902 ASIC1P78348 528 aa15.41■□□□□ 0.06
VPS52-212ENST00000445902 SATB1Q01826 763 aa15.41■□□□□ 0.06
VPS52-212ENST00000445902 HLFQ16534 295 aa15.41■□□□□ 0.06
VPS52-212ENST00000445902 ADGRA1Q86SQ6 560 aa15.41■□□□□ 0.06
VPS52-212ENST00000445902 TEX11Q8IYF3 940 aa15.41■□□□□ 0.06
VPS52-212ENST00000445902 NLRC4Q9NPP4 1024 aa15.41■□□□□ 0.06
VPS52-212ENST00000445902 LRP2BPQ9P2M1 347 aa15.41■□□□□ 0.06
VPS52-212ENST00000445902 CNOT8Q9UFF9 292 aaKnown RBP15.41■□□□□ 0.06
VPS52-212ENST00000445902 CNTNAP5Q8WYK1 1306 aa15.41■□□□□ 0.06
VPS52-212ENST00000445902 CCNE1P24864 410 aa15.41■□□□□ 0.06
VPS52-212ENST00000445902 HSD17B3P37058 310 aa15.41■□□□□ 0.06
VPS52-212ENST00000445902 GLE1Q53GS7 698 aaKnown RBP15.41■□□□□ 0.06
VPS52-212ENST00000445902 ZNF512BQ96KM6 892 aaPredicted RBP15.41■□□□□ 0.06
VPS52-212ENST00000445902 ACTR5Q9H9F9 607 aaPredicted RBP15.41■□□□□ 0.06
VPS52-212ENST00000445902 BAIAP2L1Q9UHR4 511 aa15.41■□□□□ 0.06
VPS52-212ENST00000445902 CTNNA1P35221 906 aaKnown RBP15.4■□□□□ 0.06
VPS52-212ENST00000445902 CDK17Q00537 523 aa15.4■□□□□ 0.06
VPS52-212ENST00000445902 TROAPQ12815 778 aa15.4■□□□□ 0.06
VPS52-212ENST00000445902 DTHD1Q6ZMT9 781 aa15.4■□□□□ 0.06
VPS52-212ENST00000445902 TMTC3Q6ZXV5 915 aa15.4■□□□□ 0.06
VPS52-212ENST00000445902 ERGIC2Q96RQ1 377 aa15.4■□□□□ 0.06
VPS52-212ENST00000445902 SLC39A2Q9NP94 309 aa15.4■□□□□ 0.06
VPS52-212ENST00000445902 MYH1P12882 1939 aa15.4■□□□□ 0.06
VPS52-212ENST00000445902 MYH4Q9Y623 1939 aa15.4■□□□□ 0.06
VPS52-212ENST00000445902 MYH7BA7E2Y1 1941 aa15.4■□□□□ 0.06
VPS52-212ENST00000445902 ARID5AQ03989 594 aa15.4■□□□□ 0.06
VPS52-212ENST00000445902 BYSLQ13895 437 aaKnown RBP15.4■□□□□ 0.06
VPS52-212ENST00000445902 PPP4R3AQ6IN85 833 aa15.4■□□□□ 0.06
VPS52-212ENST00000445902 CD302Q8IX05 232 aa15.4■□□□□ 0.06
VPS52-212ENST00000445902 CACNA2D3Q8IZS8 1091 aa15.4■□□□□ 0.06
VPS52-212ENST00000445902 C4orf32Q8N8J7 132 aa15.4■□□□□ 0.06
VPS52-212ENST00000445902 UBLCP1Q8WVY7 318 aaPredicted RBP15.4■□□□□ 0.06
VPS52-212ENST00000445902 GOLPH3Q9H4A6 298 aa15.4■□□□□ 0.06
VPS52-212ENST00000445902 LRRC4CQ9HCJ2 640 aa15.4■□□□□ 0.06
VPS52-212ENST00000445902 A0A1W2PQJ5 194 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 SCG2P13521 617 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 BCAMP50895 628 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 CTSWP56202 376 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 KCNB1Q14721 858 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 DHTKD1Q96HY7 919 aaPredicted RBP15.39■□□□□ 0.05
VPS52-212ENST00000445902 CARD10Q9BWT7 1032 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.39■□□□□ 0.052e-8■■■■□ 19.8
VPS52-212ENST00000445902 ABCF2Q9UG63 623 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 NOVA2Q9UNW9 492 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms