RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 TIMP1P01033 207 aa20.19■□□□□ 0.82
PDCD4-203ENST00000444997 PTGS1P23219 599 aa20.19■□□□□ 0.82
PDCD4-203ENST00000444997 FPGSQ05932 587 aa20.19■□□□□ 0.82
PDCD4-203ENST00000444997 CREB3L3Q68CJ9 461 aa20.19■□□□□ 0.82
PDCD4-203ENST00000444997 TMEM87BQ96K49 555 aa20.19■□□□□ 0.82
PDCD4-203ENST00000444997 PIGSQ96S52 555 aa20.19■□□□□ 0.82
PDCD4-203ENST00000444997 MAP3K14Q99558 947 aa20.19■□□□□ 0.82
PDCD4-203ENST00000444997 DNAH12Q6ZR08 3092 aa20.18■□□□□ 0.82
PDCD4-203ENST00000444997 PNMA6FA0A0J9YX94 578 aa20.18■□□□□ 0.82
PDCD4-203ENST00000444997 CCDC69A6NI79 296 aa20.18■□□□□ 0.82
PDCD4-203ENST00000444997 DDAH1O94760 285 aa20.18■□□□□ 0.82
PDCD4-203ENST00000444997 ITGB8P26012 769 aa20.18■□□□□ 0.82
PDCD4-203ENST00000444997 NECTIN1Q15223 517 aa20.18■□□□□ 0.82
PDCD4-203ENST00000444997 SHHQ15465 462 aa20.18■□□□□ 0.82
PDCD4-203ENST00000444997 SKAP1Q86WV1 359 aa20.18■□□□□ 0.82
PDCD4-203ENST00000444997 FAM126BQ8IXS8 530 aa20.18■□□□□ 0.82
PDCD4-203ENST00000444997 LY9Q9HBG7 655 aa20.18■□□□□ 0.82
PDCD4-203ENST00000444997 COL20A1Q9P218 1284 aa20.18■□□□□ 0.82
PDCD4-203ENST00000444997 TBX21Q9UL17 535 aa20.18■□□□□ 0.82
PDCD4-203ENST00000444997 LRRC37A2A6NM11 1700 aa20.18■□□□□ 0.82
PDCD4-203ENST00000444997 KPNA6O60684 536 aa20.17■□□□□ 0.82
PDCD4-203ENST00000444997 PPP1R11O60927 126 aaPredicted RBP20.17■□□□□ 0.82
PDCD4-203ENST00000444997 MYL3P08590 195 aa20.17■□□□□ 0.82
PDCD4-203ENST00000444997 EIF2AK2P19525 551 aaKnown RBP20.17■□□□□ 0.82
PDCD4-203ENST00000444997 HSD17B4P51659 736 aa20.17■□□□□ 0.82
PDCD4-203ENST00000444997 SEPT14Q6ZU15 432 aa20.17■□□□□ 0.82
PDCD4-203ENST00000444997 ZNF654Q8IZM8 581 aa20.17■□□□□ 0.82
PDCD4-203ENST00000444997 SLC43A3Q8NBI5 491 aa20.17■□□□□ 0.82
PDCD4-203ENST00000444997 LCTP09848 1927 aa20.17■□□□□ 0.82
PDCD4-203ENST00000444997 GCOM1H8Y6P7 765 aaPredicted RBP20.16■□□□□ 0.82
PDCD4-203ENST00000444997 CDC45O75419 566 aa20.16■□□□□ 0.82
PDCD4-203ENST00000444997 EIF3JO75822 258 aaKnown RBP20.16■□□□□ 0.82
PDCD4-203ENST00000444997 POLR2MP0CAP2 368 aa20.16■□□□□ 0.82
PDCD4-203ENST00000444997 CALM1P0DP23 149 aa20.16■□□□□ 0.82
PDCD4-203ENST00000444997 CALM2P0DP24 149 aa20.16■□□□□ 0.82
PDCD4-203ENST00000444997 CALM3P0DP25 149 aa20.16■□□□□ 0.82
PDCD4-203ENST00000444997 GNAQP50148 359 aa20.16■□□□□ 0.82
PDCD4-203ENST00000444997 C9orf50Q5SZB4 431 aa20.16■□□□□ 0.82
PDCD4-203ENST00000444997 MFSD5Q6N075 450 aa20.16■□□□□ 0.82
PDCD4-203ENST00000444997 TMEM199Q8N511 208 aa20.16■□□□□ 0.82
PDCD4-203ENST00000444997 DEFB123Q8N688 67 aa20.16■□□□□ 0.82
PDCD4-203ENST00000444997 LZTS2Q9BRK4 669 aa20.16■□□□□ 0.82
PDCD4-203ENST00000444997 MTG1Q9BT17 334 aaPredicted RBP20.16■□□□□ 0.82
PDCD4-203ENST00000444997 PXMP2Q9NR77 195 aa20.16■□□□□ 0.82
PDCD4-203ENST00000444997 LTBP2Q14767 1821 aa20.16■□□□□ 0.82
PDCD4-203ENST00000444997 SH2B2O14492 632 aaPredicted RBP20.15■□□□□ 0.82
PDCD4-203ENST00000444997 CYTH3O43739 400 aa20.15■□□□□ 0.82
PDCD4-203ENST00000444997 CD4P01730 458 aa20.15■□□□□ 0.82
PDCD4-203ENST00000444997 NR3C2P08235 984 aa20.15■□□□□ 0.82
PDCD4-203ENST00000444997 PSMC6P62333 389 aa20.15■□□□□ 0.82
PDCD4-203ENST00000444997 PURAQ00577 322 aaKnown RBP20.15■□□□□ 0.82
PDCD4-203ENST00000444997 GHRHRQ02643 423 aa20.15■□□□□ 0.82
PDCD4-203ENST00000444997 PPIGQ13427 754 aaKnown RBP eCLIP20.15■□□□□ 0.82
PDCD4-203ENST00000444997 RRP36Q96EU6 259 aaKnown RBP20.15■□□□□ 0.82
PDCD4-203ENST00000444997 A6NJR5 290 aa20.14■□□□□ 0.81
PDCD4-203ENST00000444997 OPLAHO14841 1288 aa20.14■□□□□ 0.81
PDCD4-203ENST00000444997 GH1P01241 217 aa20.14■□□□□ 0.81
PDCD4-203ENST00000444997 NEFLP07196 543 aa20.14■□□□□ 0.81
PDCD4-203ENST00000444997 SMARCA1P28370 1054 aa20.14■□□□□ 0.81
PDCD4-203ENST00000444997 LIFRP42702 1097 aa20.14■□□□□ 0.81
PDCD4-203ENST00000444997 SLC35G1Q2M3R5 365 aa20.14■□□□□ 0.81
PDCD4-203ENST00000444997 SYNE3Q6ZMZ3 975 aa20.14■□□□□ 0.81
PDCD4-203ENST00000444997 PIBF1Q8WXW3 757 aa20.14■□□□□ 0.81
PDCD4-203ENST00000444997 COPS5Q92905 334 aa20.14■□□□□ 0.81
PDCD4-203ENST00000444997 RNPC3Q96LT9 517 aaKnown RBP20.14■□□□□ 0.81
PDCD4-203ENST00000444997 MYL10Q9BUA6 226 aa20.14■□□□□ 0.81
PDCD4-203ENST00000444997 SPZ1Q9BXG8 430 aa20.14■□□□□ 0.81
PDCD4-203ENST00000444997 PPP1R12CQ9BZL4 782 aa20.14■□□□□ 0.81
PDCD4-203ENST00000444997 SEC63Q9UGP8 760 aaKnown RBP20.14■□□□□ 0.81
PDCD4-203ENST00000444997 SLC12A7Q9Y666 1083 aa20.14■□□□□ 0.81
PDCD4-203ENST00000444997 GRIN2DO15399 1336 aa20.13■□□□□ 0.81
PDCD4-203ENST00000444997 SUPT20HL2P0C7V6 817 aa20.13■□□□□ 0.81
PDCD4-203ENST00000444997 MYCLP12524 364 aaPredicted RBP20.13■□□□□ 0.81
PDCD4-203ENST00000444997 HOXA13P31271 388 aaPredicted RBP20.13■□□□□ 0.81
PDCD4-203ENST00000444997 LY6KQ17RY6 165 aa20.13■□□□□ 0.81
PDCD4-203ENST00000444997 CCDC62Q6P9F0 684 aa20.13■□□□□ 0.81
PDCD4-203ENST00000444997 TRPV6Q9H1D0 765 aa20.13■□□□□ 0.81
PDCD4-203ENST00000444997 HIPK3Q9H422 1215 aa20.13■□□□□ 0.81
PDCD4-203ENST00000444997 MRVI1Q9Y6F6 885 aa20.13■□□□□ 0.81
PDCD4-203ENST00000444997 ARIH2O95376 493 aa20.12■□□□□ 0.81
PDCD4-203ENST00000444997 EPHB4P54760 987 aa20.12■□□□□ 0.81
PDCD4-203ENST00000444997 KCNV1Q6PIU1 500 aa20.12■□□□□ 0.81
PDCD4-203ENST00000444997 FCHSD1Q86WN1 690 aa20.12■□□□□ 0.81
PDCD4-203ENST00000444997 NEK1Q96PY6 1258 aa20.12■□□□□ 0.81
PDCD4-203ENST00000444997 PDCD2LQ9BRP1 358 aa20.12■□□□□ 0.81
PDCD4-203ENST00000444997 ALDH8A1Q9H2A2 487 aaPredicted RBP20.12■□□□□ 0.81
PDCD4-203ENST00000444997 B4GALT4O60513 344 aa20.11■□□□□ 0.81
PDCD4-203ENST00000444997 CCND2P30279 289 aa20.11■□□□□ 0.81
PDCD4-203ENST00000444997 SMAD3P84022 425 aaKnown RBP20.11■□□□□ 0.81
PDCD4-203ENST00000444997 KRT32Q14532 448 aa20.11■□□□□ 0.81
PDCD4-203ENST00000444997 FAM47CQ5HY64 1035 aa20.11■□□□□ 0.81
PDCD4-203ENST00000444997 FAM109BQ6ICB4 259 aaPredicted RBP20.11■□□□□ 0.81
PDCD4-203ENST00000444997 Q7L0L9 218 aa20.11■□□□□ 0.81
PDCD4-203ENST00000444997 CUL5Q93034 780 aa20.11■□□□□ 0.81
PDCD4-203ENST00000444997 CSF2RAP15509 400 aa20.1■□□□□ 0.81
PDCD4-203ENST00000444997 CYP2C18P33260 490 aa20.1■□□□□ 0.81
PDCD4-203ENST00000444997 PGM5Q15124 567 aa20.1■□□□□ 0.81
PDCD4-203ENST00000444997 NBPF20Q3BBV1 942 aa20.1■□□□□ 0.81
PDCD4-203ENST00000444997 VSIG10LQ86VR7 867 aa20.1■□□□□ 0.81
PDCD4-203ENST00000444997 AFG1LQ8WV93 481 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms