RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 ARHGEF1Q92888 912 aaKnown RBP24.64■■□□□ 1.53
CTDSPL-206ENST00000443503 DLATP10515 647 aaKnown RBP24.63■■□□□ 1.53
CTDSPL-206ENST00000443503 SMIM5Q71RC9 77 aa24.63■■□□□ 1.53
CTDSPL-206ENST00000443503 SRGAP1Q7Z6B7 1085 aa24.63■■□□□ 1.53
CTDSPL-206ENST00000443503 RABGGTAQ92696 567 aa24.63■■□□□ 1.53
CTDSPL-206ENST00000443503 AS3MTQ9HBK9 375 aa24.63■■□□□ 1.53
CTDSPL-206ENST00000443503 RIC8AQ9NPQ8 531 aa24.63■■□□□ 1.53
CTDSPL-206ENST00000443503 EHHADHQ08426 723 aa24.63■■□□□ 1.53
CTDSPL-206ENST00000443503 KRT71Q3SY84 523 aa24.63■■□□□ 1.53
CTDSPL-206ENST00000443503 POLR1AO95602 1720 aaPredicted RBP24.63■■□□□ 1.53
CTDSPL-206ENST00000443503 UAP1Q16222 522 aaPredicted RBP24.63■■□□□ 1.53
CTDSPL-206ENST00000443503 PFKFB3Q16875 520 aaPredicted RBP24.63■■□□□ 1.53
CTDSPL-206ENST00000443503 MTA3Q9BTC8 594 aa24.63■■□□□ 1.53
CTDSPL-206ENST00000443503 KIF28PB7ZC32 967 aa24.62■■□□□ 1.53
CTDSPL-206ENST00000443503 CDAN1Q8IWY9 1227 aa24.62■■□□□ 1.53
CTDSPL-206ENST00000443503 RETREG2Q8NC44 543 aa24.62■■□□□ 1.53
CTDSPL-206ENST00000443503 KRIT1O00522 736 aa24.62■■□□□ 1.53
CTDSPL-206ENST00000443503 KRT31Q15323 416 aa24.62■■□□□ 1.53
CTDSPL-206ENST00000443503 IPO4Q8TEX9 1081 aaKnown RBP24.62■■□□□ 1.53
CTDSPL-206ENST00000443503 TXNDC16Q9P2K2 825 aa24.62■■□□□ 1.53
CTDSPL-206ENST00000443503 CSADQ9Y600 493 aa24.62■■□□□ 1.53
CTDSPL-206ENST00000443503 LIG4P49917 911 aa24.62■■□□□ 1.53
CTDSPL-206ENST00000443503 CUL4BQ13620 913 aa24.62■■□□□ 1.53
CTDSPL-206ENST00000443503 ANKRD35Q8N283 1001 aa24.62■■□□□ 1.53
CTDSPL-206ENST00000443503 PLA2G12BQ9BX93 195 aa24.62■■□□□ 1.53
CTDSPL-206ENST00000443503 KCNG1Q9UIX4 513 aa24.62■■□□□ 1.53
CTDSPL-206ENST00000443503 TBC1D10BQ4KMP7 808 aaPredicted RBP24.61■■□□□ 1.53
CTDSPL-206ENST00000443503 ZNF577Q9BSK1 485 aa24.61■■□□□ 1.53
CTDSPL-206ENST00000443503 C6orf163Q5TEZ5 329 aa24.61■■□□□ 1.53
CTDSPL-206ENST00000443503 ADAT2Q7Z6V5 191 aaKnown RBP24.61■■□□□ 1.53
CTDSPL-206ENST00000443503 NPR1P16066 1061 aa24.61■■□□□ 1.53
CTDSPL-206ENST00000443503 PNMA6FA0A0J9YX94 578 aa24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 RFX5P48382 616 aaPredicted RBP24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 CDC37Q16543 378 aaPredicted RBP24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 ZNF579Q8NAF0 562 aaKnown RBP24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 MLXIPQ9HAP2 919 aa24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 ZC3H13Q5T200 1668 aaKnown RBP24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 CLIC2O15247 247 aa24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 STAMBPO95630 424 aa24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 MXRA7P84157 204 aa24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 CYP27A1Q02318 531 aa24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 SPTLC3Q9NUV7 552 aa24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 USP17L5A8MUK1 530 aa24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 APBB1IPQ7Z5R6 666 aaPredicted RBP24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 TTC16Q8NEE8 873 aa24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 KIAA1210Q9ULL0 1709 aa24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 PSMD1Q99460 953 aa24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 TRIM6Q9C030 488 aaPredicted RBP24.6■■□□□ 1.53
CTDSPL-206ENST00000443503 SUGCTQ9HAC7 445 aa24.59■■□□□ 1.53
CTDSPL-206ENST00000443503 STAT2P52630 851 aa24.59■■□□□ 1.53
CTDSPL-206ENST00000443503 RCAN1P53805 252 aa24.59■■□□□ 1.53
CTDSPL-206ENST00000443503 SYDE2Q5VT97 1194 aa24.59■■□□□ 1.53
CTDSPL-206ENST00000443503 NT5C2P49902 561 aa24.59■■□□□ 1.53
CTDSPL-206ENST00000443503 ZBED6P86452 979 aa24.59■■□□□ 1.53
CTDSPL-206ENST00000443503 EMILIN3Q9NT22 766 aa24.59■■□□□ 1.53
CTDSPL-206ENST00000443503 GUCY1A2P33402 732 aa24.58■■□□□ 1.53
CTDSPL-206ENST00000443503 CCDC144BQ3MJ40 725 aa24.58■■□□□ 1.53
CTDSPL-206ENST00000443503 PHLPP2Q6ZVD8 1323 aa24.58■■□□□ 1.53
CTDSPL-206ENST00000443503 N4BP1O75113 896 aaKnown RBP24.58■■□□□ 1.53
CTDSPL-206ENST00000443503 PLA2G4BP0C869 781 aa24.58■■□□□ 1.53
CTDSPL-206ENST00000443503 SHC4Q6S5L8 630 aa24.58■■□□□ 1.53
CTDSPL-206ENST00000443503 CSF1RP07333 972 aa24.58■■□□□ 1.53
CTDSPL-206ENST00000443503 HOXA13P31271 388 aaPredicted RBP24.58■■□□□ 1.53
CTDSPL-206ENST00000443503 SNAP25P60880 206 aa24.58■■□□□ 1.53
CTDSPL-206ENST00000443503 CCDC6Q16204 474 aa24.58■■□□□ 1.53
CTDSPL-206ENST00000443503 MIGA2Q7L4E1 593 aa24.58■■□□□ 1.53
CTDSPL-206ENST00000443503 FAM186BQ8IYM0 893 aa24.58■■□□□ 1.53
CTDSPL-206ENST00000443503 CEP95Q96GE4 821 aa24.58■■□□□ 1.53
CTDSPL-206ENST00000443503 RAB17Q9H0T7 212 aa24.58■■□□□ 1.53
CTDSPL-206ENST00000443503 C1orf112Q9NSG2 853 aa24.58■■□□□ 1.53
CTDSPL-206ENST00000443503 FAM196BA6NMK8 535 aa24.58■■□□□ 1.52
CTDSPL-206ENST00000443503 NAA35Q5VZE5 725 aa24.58■■□□□ 1.52
CTDSPL-206ENST00000443503 SREK1Q8WXA9 508 aaKnown RBP24.58■■□□□ 1.52
CTDSPL-206ENST00000443503 SH3GLB2Q9NR46 395 aa24.58■■□□□ 1.52
CTDSPL-206ENST00000443503 PXDNLA1KZ92 1463 aa24.58■■□□□ 1.52
CTDSPL-206ENST00000443503 GAS8O95995 478 aa24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 ANO3Q9BYT9 981 aa24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 WDR11Q9BZH6 1224 aa24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 PNPLA7Q6ZV29 1317 aa24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 LRRIQ4A6NIV6 560 aa24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 TCP11X2Q5H9J9 407 aa24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 FOXP4Q8IVH2 680 aaPredicted RBP24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 NDUFA10O95299 355 aa24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 SLC8A3P57103 927 aa24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 DMP1Q13316 513 aaPredicted RBP24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 DPH5Q9H2P9 285 aa24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 FAM204AQ9H8W3 233 aa24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 FAM184BQ9ULE4 1060 aa24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 ATP5DP30049 168 aa24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 METTL13Q8N6R0 699 aa24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 POMGNT1Q8WZA1 660 aa24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 NDST4Q9H3R1 872 aa24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 THAP9Q9H5L6 903 aa24.57■■□□□ 1.52
CTDSPL-206ENST00000443503 SEC31AO94979 1220 aaKnown RBP24.56■■□□□ 1.52
CTDSPL-206ENST00000443503 B4GALNT4Q76KP1 1039 aa24.56■■□□□ 1.52
CTDSPL-206ENST00000443503 AGLP35573 1532 aa24.56■■□□□ 1.52
CTDSPL-206ENST00000443503 POTEMA6NI47 508 aa24.56■■□□□ 1.52
CTDSPL-206ENST00000443503 GH2P01242 217 aa24.56■■□□□ 1.52
CTDSPL-206ENST00000443503 IRX5P78411 483 aaPredicted RBP24.56■■□□□ 1.52
CTDSPL-206ENST00000443503 BRDTQ58F21 947 aaPredicted RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms