RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 SH3D19Q5HYK7 790 aa13.44□□□□□ -0.26
AC009404.1-202ENST00000439955 KIAA1755Q5JYT7 1200 aa13.44□□□□□ -0.26
AC009404.1-202ENST00000439955 MORN1Q5T089 497 aa13.44□□□□□ -0.26
AC009404.1-202ENST00000439955 SYDE2Q5VT97 1194 aa13.44□□□□□ -0.26
AC009404.1-202ENST00000439955 WWC2Q6AWC2 1192 aa13.44□□□□□ -0.26
AC009404.1-202ENST00000439955 TTBK2Q6IQ55 1244 aa13.44□□□□□ -0.26
AC009404.1-202ENST00000439955 TEX2Q8IWB9 1127 aa13.44□□□□□ -0.26
AC009404.1-202ENST00000439955 DIS3L2Q8IYB7 885 aaKnown RBP13.44□□□□□ -0.26
AC009404.1-202ENST00000439955 TMEM87AQ8NBN3 555 aa13.44□□□□□ -0.26
AC009404.1-202ENST00000439955 PIGSQ96S52 555 aa13.44□□□□□ -0.26
AC009404.1-202ENST00000439955 APBA2Q99767 749 aa13.44□□□□□ -0.26
AC009404.1-202ENST00000439955 CPVLQ9H3G5 476 aa13.44□□□□□ -0.26
AC009404.1-202ENST00000439955 GJB4Q9NTQ9 266 aa13.44□□□□□ -0.26
AC009404.1-202ENST00000439955 LOC285556D6RIA3 1793 aa13.44□□□□□ -0.26
AC009404.1-202ENST00000439955 hCG_1642624A0A1W2PR95 340 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 NLRP5P59047 1200 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 ERVK-9P63128 1117 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 ERVK-24P63145 666 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 SMAD3P84022 425 aaKnown RBP13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 GNL2Q13823 731 aaKnown RBP13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 NPY5RQ15761 445 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 FAM83BQ5T0W9 1011 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 GJC2Q5T442 439 aaPredicted RBP13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 POTEEQ6S8J3 1075 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 HEATR3Q7Z4Q2 680 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 PLEKHH3Q7Z736 793 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 HOMER1Q86YM7 354 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 NOSTRINQ8IVI9 506 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 SPICE1Q8N0Z3 855 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 PPM1EQ8WY54 764 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 ZNF396Q96N95 335 aaPredicted RBP13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 NUP88Q99567 741 aaPredicted RBP13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 SCAND2PQ9GZW5 306 aaPredicted RBP13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 ZMYND12Q9H0C1 365 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 TMOD4Q9NZQ9 345 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 DDX20Q9UHI6 824 aaKnown RBP13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 CFAP45Q9UL16 551 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 ISY1Q9ULR0 285 aaKnown RBP13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 KCNJ14Q9UNX9 436 aa13.43□□□□□ -0.26
AC009404.1-202ENST00000439955 BAZ2BQ9UIF8 2168 aaKnown RBP13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 ELP1O95163 1332 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 KIF28PB7ZC32 967 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 FDX1P10109 184 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 GNA11P29992 359 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 SLC16A2P36021 539 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 PLA2G5P39877 138 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 NAPAP54920 295 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 DNM1Q05193 864 aaKnown RBP13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 IKQ13123 557 aaPredicted RBP13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 GRIN2CQ14957 1233 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 ZYXQ15942 572 aaKnown RBP13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 CDC37Q16543 378 aaPredicted RBP13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 TRIM60Q495X7 471 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 WDR78Q5VTH9 848 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 MYSM1Q5VVJ2 828 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 SH3RF1Q7Z6J0 888 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 BICD2Q8TD16 824 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 PIBF1Q8WXW3 757 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 GPKOWQ92917 476 aaPredicted RBP eCLIP13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 FAM122AQ96E09 287 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 GLT8D2Q9H1C3 349 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 VAT1LQ9HCJ6 419 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 C6orf50Q9HD87 102 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 EMILIN3Q9NT22 766 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 PCDHA4Q9UN74 947 aa13.42□□□□□ -0.26
AC009404.1-202ENST00000439955 TTC28Q96AY4 2481 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 PARP14Q460N5 1801 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 BTBD18B2RXH4 712 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 DNM1LO00429 736 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 VCAM1P19320 739 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 HOXA7P31268 230 aaPredicted RBP13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 CYP2C19P33261 490 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 MAP2K5Q13163 448 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 QRICH1Q2TAL8 776 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 MFSD14CQ5VZR4 134 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 ANO1Q5XXA6 986 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 BLIDQ8IZY5 108 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 TRPV1Q8NER1 839 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 TNFRSF25Q93038 417 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 AMNQ9BXJ7 453 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 RANBP17Q9H2T7 1088 aaKnown RBP13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 POLR3EQ9NVU0 708 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 PNMA2Q9UL42 364 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 PRR12Q9ULL5 1215 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 CNPY2Q9Y2B0 182 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 TCHHQ07283 1943 aa13.41□□□□□ -0.26
AC009404.1-202ENST00000439955 TRIM43BA6NCK2 446 aa13.4□□□□□ -0.26
AC009404.1-202ENST00000439955 M0R2N6 131 aa13.4□□□□□ -0.26
AC009404.1-202ENST00000439955 YEATS4O95619 227 aa13.4□□□□□ -0.26
AC009404.1-202ENST00000439955 EPHB4P54760 987 aa13.4□□□□□ -0.26
AC009404.1-202ENST00000439955 RILPL1Q5EBL4 403 aa13.4□□□□□ -0.26
AC009404.1-202ENST00000439955 TYW1BQ6NUM6 668 aa13.4□□□□□ -0.26
AC009404.1-202ENST00000439955 SLC39A5Q6ZMH5 540 aa13.4□□□□□ -0.26
AC009404.1-202ENST00000439955 PRPF38AQ8NAV1 312 aaKnown RBP13.4□□□□□ -0.26
AC009404.1-202ENST00000439955 TRIM43Q96BQ3 446 aaPredicted RBP13.4□□□□□ -0.26
AC009404.1-202ENST00000439955 SLF1Q9BQI6 1058 aa13.4□□□□□ -0.26
AC009404.1-202ENST00000439955 LTBP2Q14767 1821 aa13.4□□□□□ -0.26
AC009404.1-202ENST00000439955 SMCO2A6NFE2 343 aa13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 PPP1R11O60927 126 aaPredicted RBP13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 NCLP19338 710 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms