RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 NKX3-2P78367 333 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 TNFAIP2Q03169 654 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 CTDSPL2Q05D32 466 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 IKQ13123 557 aaPredicted RBP5.24□□□□□ -1.57
LINC01239-202ENST00000436786 TMEM240Q5SV17 173 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 CCDC174Q6PII3 467 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 KCTD1Q719H9 257 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 NOL8Q76FK4 1167 aaKnown RBP5.24□□□□□ -1.57
LINC01239-202ENST00000436786 FAM160B2Q86V87 743 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 FAM126BQ8IXS8 530 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 GMCL1Q96IK5 515 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 TRERF1Q96PN7 1200 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.24□□□□□ -1.57
LINC01239-202ENST00000436786 MROH7Q68CQ1 1323 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 SMCHD1A6NHR9 2005 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 RNF225M0QZC1 329 aaPredicted RBP5.24□□□□□ -1.57
LINC01239-202ENST00000436786 ERC2O15083 957 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 CD4P01730 458 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 SMPD1P17405 629 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 PPIGQ13427 754 aaKnown RBP eCLIP5.24□□□□□ -1.57
LINC01239-202ENST00000436786 TKFCQ3LXA3 575 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 MUM1L1Q5H9M0 696 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 TMEM63BQ5T3F8 832 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 RASIP1Q5U651 963 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 RCSD1Q6JBY9 416 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 CXCL17Q6UXB2 119 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 ZNF365Q70YC5 407 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 RASGRP2Q7LDG7 609 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 TMEM199Q8N511 208 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 USP38Q8NB14 1042 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 TIFAQ96CG3 184 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 PURBQ96QR8 312 aaKnown RBP5.24□□□□□ -1.57
LINC01239-202ENST00000436786 PPP1R12CQ9BZL4 782 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 ZNF576Q9H609 170 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 PDGFCQ9NRA1 345 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 PRR12Q9ULL5 1215 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 STX8Q9UNK0 236 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 MTMR7Q9Y216 660 aa5.24□□□□□ -1.57
LINC01239-202ENST00000436786 GNEQ9Y223 722 aaKnown RBP5.24□□□□□ -1.57
LINC01239-202ENST00000436786 GRIN2DO15399 1336 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 ASB14A6NK59 587 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 TSPY2A6NKD2 308 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 TLR3O15455 904 aaKnown RBP5.23□□□□□ -1.57
LINC01239-202ENST00000436786 DYNC1LI2O43237 492 aaPredicted RBP5.23□□□□□ -1.57
LINC01239-202ENST00000436786 RANBP6O60518 1105 aaKnown RBP5.23□□□□□ -1.57
LINC01239-202ENST00000436786 PLA2G6O60733 806 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 MX1P20591 662 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 PSMC6P62333 389 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 FSCN1Q16658 493 aaKnown RBP5.23□□□□□ -1.57
LINC01239-202ENST00000436786 VPS53Q5VIR6 699 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 IQSEC1Q6DN90 963 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 TAPT1Q6NXT6 567 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 EEPD1Q7L9B9 569 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 TLK2Q86UE8 772 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 SLC43A3Q8NBI5 491 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 PBX4Q9BYU1 374 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 AP5M1Q9H0R1 490 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 TRPV6Q9H1D0 765 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 CYP39A1Q9NYL5 469 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 DACH1Q9UI36 760 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 A0A0C4DFX4 3053 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 SLC16A2P36021 539 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 ITGA7Q13683 1181 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 TTBK2Q6IQ55 1244 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 NSMFQ6X4W1 530 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 FBXO16Q8IX29 292 aaPredicted RBP5.23□□□□□ -1.57
LINC01239-202ENST00000436786 IL23AQ9NPF7 189 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 CXXC1Q9P0U4 656 aaPredicted RBP5.23□□□□□ -1.57
LINC01239-202ENST00000436786 CCPG1Q9ULG6 757 aa5.23□□□□□ -1.57
LINC01239-202ENST00000436786 UMODL1Q5DID0 1318 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 ORC4O43929 436 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 CABYRO75952 493 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 FGBP02675 491 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 ICAM1P05362 532 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 NOVP48745 357 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 CCL23P55773 120 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 BAATQ14032 418 aaPredicted RBP5.22□□□□□ -1.57
LINC01239-202ENST00000436786 CCDC96Q2M329 555 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 PSRC1Q6PGN9 363 aaPredicted RBP5.22□□□□□ -1.57
LINC01239-202ENST00000436786 CYP4X1Q8N118 509 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 MORC4Q8TE76 937 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 DCAF4Q8WV16 495 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 PPM1EQ8WY54 764 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 HERVK_113Q902F9 699 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 HIPK3Q9H422 1215 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 PRDM12Q9H4Q4 367 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 GPCPD1Q9NPB8 672 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 PRDM6Q9NQX0 595 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 ANAPC4Q9UJX5 808 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 Q9Y3F1 56 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 MYH4Q9Y623 1939 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 SALL3Q9BXA9 1300 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 LAMA2P24043 3122 aaKnown RBP5.22□□□□□ -1.57
LINC01239-202ENST00000436786 NFIBO00712 420 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 ZEB2O60315 1214 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 B4GALT4O60513 344 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 FGRP09769 529 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 PDE4AP27815 886 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 GMPRP36959 345 aa5.22□□□□□ -1.57
LINC01239-202ENST00000436786 ALX1Q15699 326 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms