RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 CYP26C1Q6V0L0 522 aa18.09■□□□□ 0.49
CTSB-203ENST00000420692 NOC3LQ8WTT2 800 aaKnown RBP18.09■□□□□ 0.49
CTSB-203ENST00000420692 P2RX7Q99572 595 aaKnown RBP18.09■□□□□ 0.49
CTSB-203ENST00000420692 DNAJC7Q99615 494 aa18.09■□□□□ 0.49
CTSB-203ENST00000420692 PSTPIP2Q9H939 334 aa18.09■□□□□ 0.49
CTSB-203ENST00000420692 ZNF219Q9P2Y4 722 aaPredicted RBP18.09■□□□□ 0.49
CTSB-203ENST00000420692 STK17AQ9UEE5 414 aa18.09■□□□□ 0.49
CTSB-203ENST00000420692 USP17L15C9J2P7 530 aa18.08■□□□□ 0.49
CTSB-203ENST00000420692 USP17L13C9JLJ4 530 aa18.08■□□□□ 0.49
CTSB-203ENST00000420692 USP17L11C9JVI0 530 aa18.08■□□□□ 0.49
CTSB-203ENST00000420692 USP17L18D6R9N7 530 aa18.08■□□□□ 0.49
CTSB-203ENST00000420692 USP17L22D6RA61 530 aa18.08■□□□□ 0.49
CTSB-203ENST00000420692 USP17L17D6RBQ6 530 aa18.08■□□□□ 0.49
CTSB-203ENST00000420692 USP17L19D6RCP7 530 aa18.08■□□□□ 0.49
CTSB-203ENST00000420692 USP17L20D6RJB6 530 aa18.08■□□□□ 0.49
CTSB-203ENST00000420692 USP17L24Q0WX57 530 aa18.08■□□□□ 0.49
CTSB-203ENST00000420692 QRICH1Q2TAL8 776 aa18.08■□□□□ 0.49
CTSB-203ENST00000420692 USP17L6PQ6QN14 398 aa18.08■□□□□ 0.49
CTSB-203ENST00000420692 DYMQ7RTS9 669 aa18.08■□□□□ 0.49
CTSB-203ENST00000420692 LARP4BQ92615 738 aaKnown RBP18.08■□□□□ 0.49
CTSB-203ENST00000420692 RAD54LQ92698 747 aa18.08■□□□□ 0.49
CTSB-203ENST00000420692 CAPN11Q9UMQ6 739 aa18.08■□□□□ 0.49
CTSB-203ENST00000420692 EFCAB8A8MWE9 144 aa18.08■□□□□ 0.48
CTSB-203ENST00000420692 CLCN6P51797 869 aa18.08■□□□□ 0.48
CTSB-203ENST00000420692 MRPL12P52815 198 aaKnown RBP18.08■□□□□ 0.48
CTSB-203ENST00000420692 FKBP1AP62942 108 aaKnown RBP18.08■□□□□ 0.48
CTSB-203ENST00000420692 EHHADHQ08426 723 aa18.08■□□□□ 0.48
CTSB-203ENST00000420692 SEPT2Q15019 361 aa18.08■□□□□ 0.48
CTSB-203ENST00000420692 TATDN1Q6P1N9 297 aa18.08■□□□□ 0.48
CTSB-203ENST00000420692 GLIS3Q8NEA6 775 aa18.08■□□□□ 0.48
CTSB-203ENST00000420692 MNS1Q8NEH6 495 aa18.08■□□□□ 0.48
CTSB-203ENST00000420692 SNX29Q8TEQ0 813 aa18.08■□□□□ 0.48
CTSB-203ENST00000420692 CNOT6LQ96LI5 555 aaKnown RBP18.08■□□□□ 0.48
CTSB-203ENST00000420692 SLF1Q9BQI6 1058 aa18.08■□□□□ 0.48
CTSB-203ENST00000420692 DDX25Q9UHL0 483 aaKnown RBP18.08■□□□□ 0.48
CTSB-203ENST00000420692 CHRNA5P30532 468 aa18.07■□□□□ 0.48
CTSB-203ENST00000420692 DNM2P50570 870 aa18.07■□□□□ 0.48
CTSB-203ENST00000420692 TMEM266Q2M3C6 531 aa18.07■□□□□ 0.48
CTSB-203ENST00000420692 CERKLQ49MI3 558 aaPredicted RBP18.07■□□□□ 0.48
CTSB-203ENST00000420692 UNC13DQ70J99 1090 aa18.07■□□□□ 0.48
CTSB-203ENST00000420692 RSRC2Q7L4I2 434 aaKnown RBP18.07■□□□□ 0.48
CTSB-203ENST00000420692 FLAD1Q8NFF5 587 aa18.07■□□□□ 0.48
CTSB-203ENST00000420692 OR8K1Q8NGG5 319 aa18.07■□□□□ 0.48
CTSB-203ENST00000420692 C7orf43Q8WVR3 580 aa18.07■□□□□ 0.48
CTSB-203ENST00000420692 UBXN4Q92575 508 aa18.07■□□□□ 0.48
CTSB-203ENST00000420692 UIMC1Q96RL1 719 aa18.07■□□□□ 0.48
CTSB-203ENST00000420692 NYAP2Q9P242 653 aa18.07■□□□□ 0.48
CTSB-203ENST00000420692 PI4KBQ9UBF8 816 aa18.07■□□□□ 0.48
CTSB-203ENST00000420692 PRKCSHP14314 528 aaPredicted RBP18.07■□□□□ 0.48
CTSB-203ENST00000420692 HMGB2P26583 209 aaKnown RBP18.07■□□□□ 0.48
CTSB-203ENST00000420692 HDLBPQ00341 1268 aaKnown RBP18.07■□□□□ 0.48
CTSB-203ENST00000420692 PPP2R3AQ06190 1150 aa18.07■□□□□ 0.48
CTSB-203ENST00000420692 CNNM4Q6P4Q7 775 aa18.07■□□□□ 0.48
CTSB-203ENST00000420692 CCDC47Q96A33 483 aaKnown RBP18.07■□□□□ 0.48
CTSB-203ENST00000420692 TMX4Q9H1E5 349 aaPredicted RBP18.07■□□□□ 0.48
CTSB-203ENST00000420692 DHX36Q9H2U1 1008 aaKnown RBP18.07■□□□□ 0.48
CTSB-203ENST00000420692 PRDM10Q9NQV6 1147 aa18.07■□□□□ 0.48
CTSB-203ENST00000420692 AGPAT5Q9NUQ2 364 aa18.07■□□□□ 0.48
CTSB-203ENST00000420692 MAGEC2Q9UBF1 373 aaPredicted RBP18.07■□□□□ 0.48
CTSB-203ENST00000420692 PVALEFA0A1B0GWK0 134 aa18.06■□□□□ 0.48
CTSB-203ENST00000420692 BICDL2A1A5D9 508 aa18.06■□□□□ 0.48
CTSB-203ENST00000420692 PES1O00541 588 aaKnown RBP18.06■□□□□ 0.48
CTSB-203ENST00000420692 RBM5P52756 815 aaKnown RBP eCLIP18.06■□□□□ 0.48
CTSB-203ENST00000420692 RRP1BQ14684 758 aaKnown RBP18.06■□□□□ 0.48
CTSB-203ENST00000420692 ZNF569Q5MCW4 686 aa18.06■□□□□ 0.48
CTSB-203ENST00000420692 SLFN13Q68D06 897 aa18.06■□□□□ 0.48
CTSB-203ENST00000420692 STYK1Q6J9G0 422 aa18.06■□□□□ 0.48
CTSB-203ENST00000420692 ZSCAN29Q8IWY8 852 aaPredicted RBP18.06■□□□□ 0.48
CTSB-203ENST00000420692 LUC7L2Q9Y383 392 aaKnown RBP18.06■□□□□ 0.48
CTSB-203ENST00000420692 EPN1Q9Y6I3 576 aaPredicted RBP18.06■□□□□ 0.48
CTSB-203ENST00000420692 SNAP25P60880 206 aa18.06■□□□□ 0.48
CTSB-203ENST00000420692 DDX12PQ92771 950 aa18.06■□□□□ 0.48
CTSB-203ENST00000420692 DNAJC19Q96DA6 116 aa18.06■□□□□ 0.48
CTSB-203ENST00000420692 KANSL2Q9H9L4 492 aa18.06■□□□□ 0.48
CTSB-203ENST00000420692 SMCHD1A6NHR9 2005 aa18.05■□□□□ 0.48
CTSB-203ENST00000420692 KIF5CO60282 957 aa18.05■□□□□ 0.48
CTSB-203ENST00000420692 NDUFA10O95299 355 aa18.05■□□□□ 0.48
CTSB-203ENST00000420692 TFRCP02786 760 aaKnown RBP18.05■□□□□ 0.48
CTSB-203ENST00000420692 ZSCAN20P17040 1043 aaPredicted RBP18.05■□□□□ 0.48
CTSB-203ENST00000420692 SLC1A4P43007 532 aa18.05■□□□□ 0.48
CTSB-203ENST00000420692 KRT79Q5XKE5 535 aa18.05■□□□□ 0.48
CTSB-203ENST00000420692 SMAP1Q8IYB5 467 aaPredicted RBP18.05■□□□□ 0.48
CTSB-203ENST00000420692 SLC35F6Q8N357 371 aa18.05■□□□□ 0.48
CTSB-203ENST00000420692 DCAF4Q8WV16 495 aa18.05■□□□□ 0.48
CTSB-203ENST00000420692 PCDHA1Q9Y5I3 950 aa18.05■□□□□ 0.48
CTSB-203ENST00000420692 H0YIN7 160 aa18.04■□□□□ 0.48
CTSB-203ENST00000420692 MEIS2O14770 477 aa18.04■□□□□ 0.48
CTSB-203ENST00000420692 RAD21O60216 631 aa18.04■□□□□ 0.48
CTSB-203ENST00000420692 NPM3O75607 178 aaKnown RBP18.04■□□□□ 0.48
CTSB-203ENST00000420692 GDF11O95390 407 aa18.04■□□□□ 0.48
CTSB-203ENST00000420692 TBC1D8BQ0IIM8 1120 aa18.04■□□□□ 0.48
CTSB-203ENST00000420692 CDC37Q16543 378 aaPredicted RBP18.04■□□□□ 0.48
CTSB-203ENST00000420692 AOC3Q16853 763 aa18.04■□□□□ 0.48
CTSB-203ENST00000420692 CRYGNQ8WXF5 182 aa18.04■□□□□ 0.48
CTSB-203ENST00000420692 CDK5RAP3Q96JB5 506 aa18.04■□□□□ 0.48
CTSB-203ENST00000420692 TRIM10Q9UDY6 481 aa18.04■□□□□ 0.48
CTSB-203ENST00000420692 SERPINA10Q9UK55 444 aa18.04■□□□□ 0.48
CTSB-203ENST00000420692 PPP1R2P41236 205 aa18.04■□□□□ 0.48
CTSB-203ENST00000420692 MEA1Q16626 185 aa18.04■□□□□ 0.48
CTSB-203ENST00000420692 GTPBP4Q9BZE4 634 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms