RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 RBM27Q9P2N5 1060 aaKnown RBP25.77■■□□□ 1.72
PTCD3-203ENST00000409783 ADCY6O43306 1168 aa25.76■■□□□ 1.71
PTCD3-203ENST00000409783 TFRCP02786 760 aaKnown RBP25.76■■□□□ 1.71
PTCD3-203ENST00000409783 RABEP1Q15276 862 aa25.76■■□□□ 1.71
PTCD3-203ENST00000409783 ANO1Q5XXA6 986 aa25.76■■□□□ 1.71
PTCD3-203ENST00000409783 PPP1R18Q6NYC8 613 aa25.76■■□□□ 1.71
PTCD3-203ENST00000409783 UBE2Q1Q7Z7E8 422 aa25.76■■□□□ 1.71
PTCD3-203ENST00000409783 PSTPIP2Q9H939 334 aa25.76■■□□□ 1.71
PTCD3-203ENST00000409783 KIAA1217Q5T5P2 1943 aa25.75■■□□□ 1.71
PTCD3-203ENST00000409783 CTDNEP1O95476 244 aa25.75■■□□□ 1.71
PTCD3-203ENST00000409783 AKR1A1P14550 325 aa25.75■■□□□ 1.71
PTCD3-203ENST00000409783 CCDC144BQ3MJ40 725 aa25.75■■□□□ 1.71
PTCD3-203ENST00000409783 EEPD1Q7L9B9 569 aa25.75■■□□□ 1.71
PTCD3-203ENST00000409783 FBXO16Q8IX29 292 aaPredicted RBP25.75■■□□□ 1.71
PTCD3-203ENST00000409783 NECAB1Q8N987 351 aa25.75■■□□□ 1.71
PTCD3-203ENST00000409783 IWS1Q96ST2 819 aa25.75■■□□□ 1.71
PTCD3-203ENST00000409783 VTA1Q9NP79 307 aa25.75■■□□□ 1.71
PTCD3-203ENST00000409783 PDGFCQ9NRA1 345 aa25.75■■□□□ 1.71
PTCD3-203ENST00000409783 FAM184BQ9ULE4 1060 aa25.75■■□□□ 1.71
PTCD3-203ENST00000409783 FRMPD4Q14CM0 1322 aa25.74■■□□□ 1.71
PTCD3-203ENST00000409783 CPLX1O14810 134 aa25.74■■□□□ 1.71
PTCD3-203ENST00000409783 EIF2AK2P19525 551 aaKnown RBP25.74■■□□□ 1.71
PTCD3-203ENST00000409783 NAPAP54920 295 aa25.74■■□□□ 1.71
PTCD3-203ENST00000409783 PDE4DQ08499 809 aa25.74■■□□□ 1.71
PTCD3-203ENST00000409783 ST3GAL1Q11201 340 aa25.74■■□□□ 1.71
PTCD3-203ENST00000409783 ARHGEF16Q5VV41 709 aa25.74■■□□□ 1.71
PTCD3-203ENST00000409783 FCHSD1Q86WN1 690 aa25.74■■□□□ 1.71
PTCD3-203ENST00000409783 GTF3C6Q969F1 213 aa25.74■■□□□ 1.71
PTCD3-203ENST00000409783 LENG1Q96BZ8 264 aaPredicted RBP25.74■■□□□ 1.71
PTCD3-203ENST00000409783 PDCD2LQ9BRP1 358 aa25.74■■□□□ 1.71
PTCD3-203ENST00000409783 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.73■■□□□ 1.71
PTCD3-203ENST00000409783 RBM47A0AV96 593 aaKnown RBP25.73■■□□□ 1.71
PTCD3-203ENST00000409783 NR3C2P08235 984 aa25.73■■□□□ 1.71
PTCD3-203ENST00000409783 SSRP1Q08945 709 aaKnown RBP25.73■■□□□ 1.71
PTCD3-203ENST00000409783 ANKLE1Q8NAG6 615 aa25.73■■□□□ 1.71
PTCD3-203ENST00000409783 IL31RAQ8NI17 732 aa25.73■■□□□ 1.71
PTCD3-203ENST00000409783 RIC8AQ9NPQ8 531 aa25.73■■□□□ 1.71
PTCD3-203ENST00000409783 LIMCH1Q9UPQ0 1083 aa25.73■■□□□ 1.71
PTCD3-203ENST00000409783 B4DLN1 442 aa25.72■■□□□ 1.71
PTCD3-203ENST00000409783 ADCYAP1R1P41586 468 aa25.72■■□□□ 1.71
PTCD3-203ENST00000409783 MRPL12P52815 198 aaKnown RBP25.72■■□□□ 1.71
PTCD3-203ENST00000409783 AKAP17AQ02040 695 aaKnown RBP25.72■■□□□ 1.71
PTCD3-203ENST00000409783 PGM5Q15124 567 aa25.72■■□□□ 1.71
PTCD3-203ENST00000409783 UBE2SQ16763 222 aa25.72■■□□□ 1.71
PTCD3-203ENST00000409783 CPLX2Q6PUV4 134 aaKnown RBP25.72■■□□□ 1.71
PTCD3-203ENST00000409783 SMARCC2Q8TAQ2 1214 aa25.72■■□□□ 1.71
PTCD3-203ENST00000409783 CUL5Q93034 780 aa25.72■■□□□ 1.71
PTCD3-203ENST00000409783 MPHOSPH6Q99547 160 aaKnown RBP25.72■■□□□ 1.71
PTCD3-203ENST00000409783 ESYT2A0FGR8 921 aa25.71■■□□□ 1.71
PTCD3-203ENST00000409783 SMCO2A6NFE2 343 aa25.71■■□□□ 1.71
PTCD3-203ENST00000409783 DTNBO60941 627 aa25.71■■□□□ 1.71
PTCD3-203ENST00000409783 TMEM63BQ5T3F8 832 aa25.71■■□□□ 1.71
PTCD3-203ENST00000409783 TEX2Q8IWB9 1127 aa25.71■■□□□ 1.71
PTCD3-203ENST00000409783 TRIM22Q8IYM9 498 aa25.71■■□□□ 1.71
PTCD3-203ENST00000409783 STK36Q9NRP7 1315 aa25.7■■□□□ 1.71
PTCD3-203ENST00000409783 ADAMTS3O15072 1205 aa25.7■■□□□ 1.7
PTCD3-203ENST00000409783 DUSP11O75319 330 aaKnown RBP25.7■■□□□ 1.7
PTCD3-203ENST00000409783 DEXIO95424 95 aa25.7■■□□□ 1.7
PTCD3-203ENST00000409783 RARBP10826 455 aa25.7■■□□□ 1.7
PTCD3-203ENST00000409783 STXBP2Q15833 593 aa25.7■■□□□ 1.7
PTCD3-203ENST00000409783 IQSEC1Q6DN90 963 aa25.7■■□□□ 1.7
PTCD3-203ENST00000409783 VSIG10LQ86VR7 867 aa25.7■■□□□ 1.7
PTCD3-203ENST00000409783 DIS3LQ8TF46 1054 aaKnown RBP25.7■■□□□ 1.7
PTCD3-203ENST00000409783 ZMYND12Q9H0C1 365 aa25.7■■□□□ 1.7
PTCD3-203ENST00000409783 GNEQ9Y223 722 aaKnown RBP25.7■■□□□ 1.7
PTCD3-203ENST00000409783 MKI67P46013 3256 aaKnown RBP25.69■■□□□ 1.7
PTCD3-203ENST00000409783 ADAMTS4O75173 837 aa25.69■■□□□ 1.7
PTCD3-203ENST00000409783 CDKL5O76039 1030 aa25.69■■□□□ 1.7
PTCD3-203ENST00000409783 FARP2O94887 1054 aaPredicted RBP25.69■■□□□ 1.7
PTCD3-203ENST00000409783 SMPD1P17405 629 aa25.69■■□□□ 1.7
PTCD3-203ENST00000409783 CLK2P49760 499 aaKnown RBP25.69■■□□□ 1.7
PTCD3-203ENST00000409783 ADCY7P51828 1080 aa25.69■■□□□ 1.7
PTCD3-203ENST00000409783 TNFAIP2Q03169 654 aa25.69■■□□□ 1.7
PTCD3-203ENST00000409783 IL27Q8NEV9 243 aa25.69■■□□□ 1.7
PTCD3-203ENST00000409783 AIFM3Q96NN9 605 aa25.69■■□□□ 1.7
PTCD3-203ENST00000409783 XPNPEP3Q9NQH7 507 aa25.69■■□□□ 1.7
PTCD3-203ENST00000409783 RGS20O76081 388 aa25.68■■□□□ 1.7
PTCD3-203ENST00000409783 CD2BP2O95400 341 aaKnown RBP25.68■■□□□ 1.7
PTCD3-203ENST00000409783 FDPSP14324 419 aaKnown RBP25.68■■□□□ 1.7
PTCD3-203ENST00000409783 PTGS1P23219 599 aa25.68■■□□□ 1.7
PTCD3-203ENST00000409783 NSUN7Q8NE18 718 aaKnown RBP25.68■■□□□ 1.7
PTCD3-203ENST00000409783 UPF3AQ9H1J1 476 aaKnown RBP25.68■■□□□ 1.7
PTCD3-203ENST00000409783 SH3GLB2Q9NR46 395 aa25.68■■□□□ 1.7
PTCD3-203ENST00000409783 VPS54Q9P1Q0 977 aa25.68■■□□□ 1.7
PTCD3-203ENST00000409783 SYNRGQ9UMZ2 1314 aa25.67■■□□□ 1.7
PTCD3-203ENST00000409783 EIF3JO75822 258 aaKnown RBP25.67■■□□□ 1.7
PTCD3-203ENST00000409783 PGK1P00558 417 aa25.67■■□□□ 1.7
PTCD3-203ENST00000409783 NKX3-2P78367 333 aa25.67■■□□□ 1.7
PTCD3-203ENST00000409783 IRX5P78411 483 aaPredicted RBP25.67■■□□□ 1.7
PTCD3-203ENST00000409783 MRPS9P82933 396 aaKnown RBP25.67■■□□□ 1.7
PTCD3-203ENST00000409783 LRRC41Q15345 812 aa25.67■■□□□ 1.7
PTCD3-203ENST00000409783 CCDC12Q8WUD4 166 aaPredicted RBP25.67■■□□□ 1.7
PTCD3-203ENST00000409783 PAWRQ96IZ0 340 aaKnown RBP25.67■■□□□ 1.7
PTCD3-203ENST00000409783 ZSCAN31Q96LW9 406 aaPredicted RBP25.67■■□□□ 1.7
PTCD3-203ENST00000409783 WDR11Q9BZH6 1224 aa25.67■■□□□ 1.7
PTCD3-203ENST00000409783 GLT8D2Q9H1C3 349 aa25.67■■□□□ 1.7
PTCD3-203ENST00000409783 PCDHA6Q9UN73 950 aa25.67■■□□□ 1.7
PTCD3-203ENST00000409783 PCDHA8Q9Y5H6 950 aa25.67■■□□□ 1.7
PTCD3-203ENST00000409783 CTAGE5O15320 804 aa25.66■■□□□ 1.7
PTCD3-203ENST00000409783 ARIH2O95376 493 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms