RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 CAMSAP1Q5T5Y3 1602 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 USP17L12C9JPN9 530 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 USP17L21D6R901 530 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 NOP56O00567 594 aaKnown RBP9.68□□□□□ -0.86
PTPRM-202ENST00000400053 CTNND1O60716 968 aaKnown RBP9.68□□□□□ -0.86
PTPRM-202ENST00000400053 ADCY8P40145 1251 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 TECP42680 631 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 EPHB4P54760 987 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 RESTQ13127 1097 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 CASC4Q6P4E1 433 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 APOA5Q6Q788 366 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 N4BP2L2Q92802 583 aaPredicted RBP9.68□□□□□ -0.86
PTPRM-202ENST00000400053 EPC1Q9H2F5 836 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 XRCC5P13010 732 aaKnown RBP9.68□□□□□ -0.86
PTPRM-202ENST00000400053 COG7P83436 770 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 NNTQ13423 1086 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 REXO1Q8N1G1 1221 aaKnown RBP9.68□□□□□ -0.86
PTPRM-202ENST00000400053 OSBP2Q969R2 916 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 AZI2Q9H6S1 392 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 PICK1Q9NRD5 415 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 ASAP1Q9ULH1 1129 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 TNKSO95271 1327 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 SUN1O94901 812 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 GNA14O95837 355 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 HSPA8P11142 646 aaKnown RBP9.68□□□□□ -0.86
PTPRM-202ENST00000400053 POLR2BP30876 1174 aaKnown RBP9.68□□□□□ -0.86
PTPRM-202ENST00000400053 ADCY7P51828 1080 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 CYP27A1Q02318 531 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 VSTM4Q8IW00 320 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 GRK7Q8WTQ7 553 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 KLHL29Q96CT2 875 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 CCDC124Q96CT7 223 aaKnown RBP9.68□□□□□ -0.86
PTPRM-202ENST00000400053 TFCP2L1Q9NZI6 479 aa9.68□□□□□ -0.86
PTPRM-202ENST00000400053 MAGEA9P43362 315 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 BCAMP50895 628 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 ARPP21Q9UBL0 812 aaPredicted RBP9.67□□□□□ -0.86
PTPRM-202ENST00000400053 ARMCX3Q9UH62 379 aaPredicted RBP9.67□□□□□ -0.86
PTPRM-202ENST00000400053 M0R2C6 588 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 RIMBP2O15034 1052 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 ZBTB22O15209 634 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 THAP12O43422 761 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 PPP6R2O75170 966 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 CD19P15391 556 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 MAN1A1P33908 653 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 IL6STP40189 918 aaPredicted RBP9.67□□□□□ -0.86
PTPRM-202ENST00000400053 SLC7A5Q01650 507 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 EPHA10Q5JZY3 1008 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 BBOF1Q8ND07 529 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 ZSCAN10Q96SZ4 725 aaPredicted RBP9.67□□□□□ -0.86
PTPRM-202ENST00000400053 TRIM4Q9C037 500 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 TRIM37O94972 964 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 CYP2E1P05181 493 aaPredicted RBP9.67□□□□□ -0.86
PTPRM-202ENST00000400053 ADD2P35612 726 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 ATP6V1E1P36543 226 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 LLGL1Q15334 1064 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 FAM133BQ5BKY9 247 aaKnown RBP9.67□□□□□ -0.86
PTPRM-202ENST00000400053 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.67□□□□□ -0.86
PTPRM-202ENST00000400053 CCDC68Q9H2F9 335 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 PNMA2Q9UL42 364 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 ATP8A1Q9Y2Q0 1164 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 PARP3Q9Y6F1 533 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 CDC42BPGQ6DT37 1551 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 SMCO2A6NFE2 343 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 EIF3CLB5ME19 914 aaKnown RBP9.67□□□□□ -0.86
PTPRM-202ENST00000400053 EVI5O60447 810 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 UFL1O94874 794 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 GUCY2CP25092 1073 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 PDE6BP35913 854 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 BLIDQ8IZY5 108 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 GSDMAQ96QA5 445 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 EIF3CQ99613 913 aaKnown RBP9.67□□□□□ -0.86
PTPRM-202ENST00000400053 DRC3Q9H069 523 aa9.67□□□□□ -0.86
PTPRM-202ENST00000400053 CCNL1Q9UK58 526 aaPredicted RBP9.67□□□□□ -0.86
PTPRM-202ENST00000400053 H0YCG3 227 aa9.66□□□□□ -0.86
PTPRM-202ENST00000400053 DDX39AO00148 427 aaKnown RBP9.66□□□□□ -0.86
PTPRM-202ENST00000400053 LUC7L3O95232 432 aaKnown RBP9.66□□□□□ -0.86
PTPRM-202ENST00000400053 CYP2J2P51589 502 aa9.66□□□□□ -0.86
PTPRM-202ENST00000400053 CCDC144BQ3MJ40 725 aa9.66□□□□□ -0.86
PTPRM-202ENST00000400053 MMS22LQ6ZRQ5 1243 aa9.66□□□□□ -0.86
PTPRM-202ENST00000400053 TAB3Q8N5C8 712 aaPredicted RBP9.66□□□□□ -0.86
PTPRM-202ENST00000400053 CNOT6LQ96LI5 555 aaKnown RBP9.66□□□□□ -0.86
PTPRM-202ENST00000400053 USP27XA6NNY8 438 aa9.66□□□□□ -0.86
PTPRM-202ENST00000400053 TTC4O95801 387 aa9.66□□□□□ -0.86
PTPRM-202ENST00000400053 PCP11498 1178 aaKnown RBP9.66□□□□□ -0.86
PTPRM-202ENST00000400053 PDCLQ13371 301 aa9.66□□□□□ -0.86
PTPRM-202ENST00000400053 CC2D1AQ6P1N0 951 aaPredicted RBP9.66□□□□□ -0.86
PTPRM-202ENST00000400053 TADA2BQ86TJ2 420 aa9.66□□□□□ -0.86
PTPRM-202ENST00000400053 RBM17Q96I25 401 aaKnown RBP9.66□□□□□ -0.86
PTPRM-202ENST00000400053 KIF23Q02241 960 aaPredicted RBP9.66□□□□□ -0.86
PTPRM-202ENST00000400053 TOB2Q14106 344 aaPredicted RBP9.66□□□□□ -0.86
PTPRM-202ENST00000400053 HADHQ16836 314 aaKnown RBP9.66□□□□□ -0.86
PTPRM-202ENST00000400053 BSPRYQ5W0U4 402 aa9.66□□□□□ -0.86
PTPRM-202ENST00000400053 SDR42E1Q8WUS8 393 aa9.66□□□□□ -0.86
PTPRM-202ENST00000400053 TYW1Q9NV66 732 aaKnown RBP9.66□□□□□ -0.86
PTPRM-202ENST00000400053 IPO11Q9UI26 975 aaKnown RBP9.66□□□□□ -0.86
PTPRM-202ENST00000400053 REREQ9P2R6 1566 aa9.66□□□□□ -0.86
PTPRM-202ENST00000400053 CYP27B1O15528 508 aa9.66□□□□□ -0.86
PTPRM-202ENST00000400053 GYG1P46976 350 aa9.66□□□□□ -0.86
PTPRM-202ENST00000400053 GPBP1Q86WP2 473 aa9.66□□□□□ -0.86
PTPRM-202ENST00000400053 NLRP7Q8WX94 980 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms