RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 MASTLQ96GX5 879 aa26.55■■□□□ 1.84
PABPN1-202ENST00000397276 MAGEF1Q9HAY2 307 aa26.55■■□□□ 1.84
PABPN1-202ENST00000397276 hCG_1984214I3L0E3 225 aa26.54■■□□□ 1.84
PABPN1-202ENST00000397276 IDEP14735 1019 aa26.54■■□□□ 1.84
PABPN1-202ENST00000397276 ERCC3P19447 782 aa26.54■■□□□ 1.84
PABPN1-202ENST00000397276 CCNE1P24864 410 aa26.54■■□□□ 1.84
PABPN1-202ENST00000397276 ZNF713Q8N859 430 aaPredicted RBP26.54■■□□□ 1.84
PABPN1-202ENST00000397276 SNX29Q8TEQ0 813 aa26.54■■□□□ 1.84
PABPN1-202ENST00000397276 DDTLA6NHG4 134 aaPredicted RBP26.54■■□□□ 1.84
PABPN1-202ENST00000397276 ZNF507Q8TCN5 953 aa26.54■■□□□ 1.84
PABPN1-202ENST00000397276 RIC8AQ9NPQ8 531 aa26.54■■□□□ 1.84
PABPN1-202ENST00000397276 LTBP1Q14766 1721 aa26.54■■□□□ 1.84
PABPN1-202ENST00000397276 ADAMTSL1Q8N6G6 1762 aa26.53■■□□□ 1.84
PABPN1-202ENST00000397276 USP17L15C9J2P7 530 aa26.53■■□□□ 1.84
PABPN1-202ENST00000397276 USP17L13C9JLJ4 530 aa26.53■■□□□ 1.84
PABPN1-202ENST00000397276 USP17L11C9JVI0 530 aa26.53■■□□□ 1.84
PABPN1-202ENST00000397276 USP17L18D6R9N7 530 aa26.53■■□□□ 1.84
PABPN1-202ENST00000397276 USP17L22D6RA61 530 aa26.53■■□□□ 1.84
PABPN1-202ENST00000397276 USP17L17D6RBQ6 530 aa26.53■■□□□ 1.84
PABPN1-202ENST00000397276 USP17L19D6RCP7 530 aa26.53■■□□□ 1.84
PABPN1-202ENST00000397276 USP17L20D6RJB6 530 aa26.53■■□□□ 1.84
PABPN1-202ENST00000397276 USP17L24Q0WX57 530 aa26.53■■□□□ 1.84
PABPN1-202ENST00000397276 USP17L6PQ6QN14 398 aa26.53■■□□□ 1.84
PABPN1-202ENST00000397276 CNOT6LQ96LI5 555 aaKnown RBP26.53■■□□□ 1.84
PABPN1-202ENST00000397276 UBXN6Q9BZV1 441 aa26.53■■□□□ 1.84
PABPN1-202ENST00000397276 LUC7L2Q9Y383 392 aaKnown RBP26.53■■□□□ 1.84
PABPN1-202ENST00000397276 MTIF2P46199 727 aaKnown RBP26.53■■□□□ 1.84
PABPN1-202ENST00000397276 TRIM14Q14142 442 aa26.53■■□□□ 1.84
PABPN1-202ENST00000397276 SMC1AQ14683 1233 aaKnown RBP26.53■■□□□ 1.84
PABPN1-202ENST00000397276 KCNK18Q7Z418 384 aa26.53■■□□□ 1.84
PABPN1-202ENST00000397276 LARP4BQ92615 738 aaKnown RBP26.53■■□□□ 1.84
PABPN1-202ENST00000397276 PCMTD1Q96MG8 357 aaPredicted RBP26.53■■□□□ 1.84
PABPN1-202ENST00000397276 PARD6BQ9BYG5 372 aa26.53■■□□□ 1.84
PABPN1-202ENST00000397276 PSTPIP2Q9H939 334 aa26.53■■□□□ 1.84
PABPN1-202ENST00000397276 ZBTB5O15062 677 aa26.52■■□□□ 1.84
PABPN1-202ENST00000397276 FAM193AP78312 1265 aa26.52■■□□□ 1.84
PABPN1-202ENST00000397276 CUL5Q93034 780 aa26.52■■□□□ 1.84
PABPN1-202ENST00000397276 DDX25Q9UHL0 483 aaKnown RBP26.52■■□□□ 1.84
PABPN1-202ENST00000397276 MYH8P13535 1937 aa26.52■■□□□ 1.84
PABPN1-202ENST00000397276 SNAP25P60880 206 aa26.52■■□□□ 1.84
PABPN1-202ENST00000397276 RAD51AP2Q09MP3 1159 aa26.52■■□□□ 1.84
PABPN1-202ENST00000397276 TBC1D8BQ0IIM8 1120 aa26.52■■□□□ 1.84
PABPN1-202ENST00000397276 AGPAT5Q9NUQ2 364 aa26.52■■□□□ 1.84
PABPN1-202ENST00000397276 ANKRD31Q8N7Z5 1873 aa26.52■■□□□ 1.84
PABPN1-202ENST00000397276 TFRCP02786 760 aaKnown RBP26.52■■□□□ 1.84
PABPN1-202ENST00000397276 EEF2P13639 858 aaKnown RBP26.52■■□□□ 1.84
PABPN1-202ENST00000397276 FXR2P51116 673 aaKnown RBP eCLIP26.52■■□□□ 1.84
PABPN1-202ENST00000397276 SLC35F6Q8N357 371 aa26.52■■□□□ 1.84
PABPN1-202ENST00000397276 TFR2Q9UP52 801 aa26.52■■□□□ 1.84
PABPN1-202ENST00000397276 ECM1Q16610 540 aa26.51■■□□□ 1.83
PABPN1-202ENST00000397276 GPATCH4Q5T3I0 446 aaKnown RBP26.51■■□□□ 1.83
PABPN1-202ENST00000397276 KRT79Q5XKE5 535 aa26.51■■□□□ 1.83
PABPN1-202ENST00000397276 CNNM4Q6P4Q7 775 aa26.51■■□□□ 1.83
PABPN1-202ENST00000397276 OR8K1Q8NGG5 319 aa26.51■■□□□ 1.83
PABPN1-202ENST00000397276 AKT1S1Q96B36 256 aa26.51■■□□□ 1.83
PABPN1-202ENST00000397276 SEMA6BQ9H3T3 888 aa26.51■■□□□ 1.83
PABPN1-202ENST00000397276 BICDL2A1A5D9 508 aa26.51■■□□□ 1.83
PABPN1-202ENST00000397276 FECHP22830 423 aa26.51■■□□□ 1.83
PABPN1-202ENST00000397276 TRIM10Q9UDY6 481 aa26.51■■□□□ 1.83
PABPN1-202ENST00000397276 PUF60Q9UHX1 559 aaKnown RBP26.51■■□□□ 1.83
PABPN1-202ENST00000397276 LRRC37AA6NMS7 1700 aa26.51■■□□□ 1.83
PABPN1-202ENST00000397276 TRIM21P19474 475 aaKnown RBP26.5■■□□□ 1.83
PABPN1-202ENST00000397276 SLC1A4P43007 532 aa26.5■■□□□ 1.83
PABPN1-202ENST00000397276 MRPL12P52815 198 aaKnown RBP26.5■■□□□ 1.83
PABPN1-202ENST00000397276 KIF4BQ2VIQ3 1234 aa26.5■■□□□ 1.83
PABPN1-202ENST00000397276 CERKLQ49MI3 558 aaPredicted RBP26.5■■□□□ 1.83
PABPN1-202ENST00000397276 PODNQ7Z5L7 613 aa26.5■■□□□ 1.83
PABPN1-202ENST00000397276 NOC4LQ9BVI4 516 aaKnown RBP26.5■■□□□ 1.83
PABPN1-202ENST00000397276 DNM2P50570 870 aa26.5■■□□□ 1.83
PABPN1-202ENST00000397276 LRRC41Q15345 812 aa26.5■■□□□ 1.83
PABPN1-202ENST00000397276 C2CD5Q86YS7 1000 aa26.5■■□□□ 1.83
PABPN1-202ENST00000397276 RAB34Q9BZG1 259 aa26.5■■□□□ 1.83
PABPN1-202ENST00000397276 EPN1Q9Y6I3 576 aaPredicted RBP26.5■■□□□ 1.83
PABPN1-202ENST00000397276 HAS1Q92839 578 aa26.49■■□□□ 1.83
PABPN1-202ENST00000397276 GDF11O95390 407 aa26.49■■□□□ 1.83
PABPN1-202ENST00000397276 SSBP05455 408 aaKnown RBP eCLIP26.49■■□□□ 1.83
PABPN1-202ENST00000397276 TSR1Q2NL82 804 aaKnown RBP26.49■■□□□ 1.83
PABPN1-202ENST00000397276 GLIS3Q8NEA6 775 aa26.49■■□□□ 1.83
PABPN1-202ENST00000397276 CLK2P49760 499 aaKnown RBP26.48■■□□□ 1.83
PABPN1-202ENST00000397276 ORC2Q13416 577 aaPredicted RBP26.48■■□□□ 1.83
PABPN1-202ENST00000397276 SEPT2Q15019 361 aa26.48■■□□□ 1.83
PABPN1-202ENST00000397276 QRICH1Q2TAL8 776 aa26.48■■□□□ 1.83
PABPN1-202ENST00000397276 RSRC2Q7L4I2 434 aaKnown RBP26.48■■□□□ 1.83
PABPN1-202ENST00000397276 ZDHHC15Q96MV8 337 aa26.48■■□□□ 1.83
PABPN1-202ENST00000397276 TRIM34Q9BYJ4 488 aa26.48■■□□□ 1.83
PABPN1-202ENST00000397276 FAM198AQ9UFP1 575 aa26.48■■□□□ 1.83
PABPN1-202ENST00000397276 GUCA1BQ9UMX6 200 aa26.48■■□□□ 1.83
PABPN1-202ENST00000397276 A0A1W2PQC6 194 aa26.48■■□□□ 1.83
PABPN1-202ENST00000397276 NDUFA10O95299 355 aa26.48■■□□□ 1.83
PABPN1-202ENST00000397276 SH3BP5LQ7L8J4 393 aa26.48■■□□□ 1.83
PABPN1-202ENST00000397276 DDX12PQ92771 950 aa26.48■■□□□ 1.83
PABPN1-202ENST00000397276 FUT8Q9BYC5 575 aa26.48■■□□□ 1.83
PABPN1-202ENST00000397276 PCDHA1Q9Y5I3 950 aa26.48■■□□□ 1.83
PABPN1-202ENST00000397276 BRWD3Q6RI45 1802 aa26.48■■□□□ 1.83
PABPN1-202ENST00000397276 FOCADQ5VW36 1801 aa26.48■■□□□ 1.83
PABPN1-202ENST00000397276 WDR59Q6PJI9 974 aa26.47■■□□□ 1.83
PABPN1-202ENST00000397276 GPR161Q8N6U8 529 aaKnown RBP26.47■■□□□ 1.83
PABPN1-202ENST00000397276 NOC3LQ8WTT2 800 aaKnown RBP26.47■■□□□ 1.83
PABPN1-202ENST00000397276 RAD54LQ92698 747 aa26.47■■□□□ 1.83
PABPN1-202ENST00000397276 CAPN11Q9UMQ6 739 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms