RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 EHMT1Q9H9B1 1298 aa30.39■■■□□ 2.46
MSX1-201ENST00000382723 BTBD7Q9P203 1132 aa30.39■■■□□ 2.46
MSX1-201ENST00000382723 OSBPP22059 807 aa30.38■■■□□ 2.45
MSX1-201ENST00000382723 LONP1P36776 959 aaKnown RBP30.38■■■□□ 2.45
MSX1-201ENST00000382723 GTF2A2P52657 109 aa30.38■■■□□ 2.45
MSX1-201ENST00000382723 MTMR9Q96QG7 549 aa30.38■■■□□ 2.45
MSX1-201ENST00000382723 PAGR1Q9BTK6 254 aa30.38■■■□□ 2.45
MSX1-201ENST00000382723 COL11A1P12107 1806 aaPredicted RBP30.38■■■□□ 2.45
MSX1-201ENST00000382723 CETPP11597 493 aa30.37■■■□□ 2.45
MSX1-201ENST00000382723 TXKP42681 527 aa30.37■■■□□ 2.45
MSX1-201ENST00000382723 RPS6P62753 249 aaKnown RBP30.37■■■□□ 2.45
MSX1-201ENST00000382723 SLC30A10Q6XR72 485 aa30.37■■■□□ 2.45
MSX1-201ENST00000382723 RNF207Q6ZRF8 634 aa30.37■■■□□ 2.45
MSX1-201ENST00000382723 CKAP2LQ8IYA6 745 aa30.37■■■□□ 2.45
MSX1-201ENST00000382723 MB21D1Q8N884 522 aa30.37■■■□□ 2.45
MSX1-201ENST00000382723 MS4A4AQ96JQ5 239 aa30.37■■■□□ 2.45
MSX1-201ENST00000382723 CYP3A7-CYP3A51PA0A087WV96 503 aa30.37■■■□□ 2.45
MSX1-201ENST00000382723 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP30.37■■■□□ 2.45
MSX1-201ENST00000382723 CYP3A7P24462 503 aa30.37■■■□□ 2.45
MSX1-201ENST00000382723 ZNF76P36508 570 aa30.37■■■□□ 2.45
MSX1-201ENST00000382723 SPRYD7Q5W111 196 aa30.37■■■□□ 2.45
MSX1-201ENST00000382723 PDILTQ8N807 584 aa30.37■■■□□ 2.45
MSX1-201ENST00000382723 SYTL5Q8TDW5 730 aaPredicted RBP30.37■■■□□ 2.45
MSX1-201ENST00000382723 UIMC1Q96RL1 719 aa30.37■■■□□ 2.45
MSX1-201ENST00000382723 MYH7BA7E2Y1 1941 aa30.37■■■□□ 2.45
MSX1-201ENST00000382723 CCL15-CCL14A0A0B4J2E2 113 aa30.36■■■□□ 2.45
MSX1-201ENST00000382723 GHRHRQ02643 423 aa30.36■■■□□ 2.45
MSX1-201ENST00000382723 CCL15Q16663 113 aa30.36■■■□□ 2.45
MSX1-201ENST00000382723 PRR16Q569H4 304 aa30.36■■■□□ 2.45
MSX1-201ENST00000382723 SDF4Q9BRK5 362 aa30.36■■■□□ 2.45
MSX1-201ENST00000382723 POLR2DO15514 142 aaKnown RBP30.35■■■□□ 2.45
MSX1-201ENST00000382723 MARCH6O60337 910 aa30.35■■■□□ 2.45
MSX1-201ENST00000382723 CDC25AP30304 524 aa30.35■■■□□ 2.45
MSX1-201ENST00000382723 TECP42680 631 aa30.35■■■□□ 2.45
MSX1-201ENST00000382723 MOXD1Q6UVY6 613 aa30.35■■■□□ 2.45
MSX1-201ENST00000382723 FAM86B1E9PN63 330 aa30.35■■■□□ 2.45
MSX1-201ENST00000382723 CYP3A4P08684 503 aa30.35■■■□□ 2.45
MSX1-201ENST00000382723 FAM86B2P0C5J1 330 aa30.35■■■□□ 2.45
MSX1-201ENST00000382723 TKFCQ3LXA3 575 aa30.35■■■□□ 2.45
MSX1-201ENST00000382723 GJA10Q969M2 543 aa30.35■■■□□ 2.45
MSX1-201ENST00000382723 ACAD9Q9H845 621 aa30.35■■■□□ 2.45
MSX1-201ENST00000382723 MAP3K20Q9NYL2 800 aaKnown RBP30.35■■■□□ 2.45
MSX1-201ENST00000382723 BAATQ14032 418 aaPredicted RBP30.34■■■□□ 2.45
MSX1-201ENST00000382723 LONRF3Q496Y0 759 aa30.34■■■□□ 2.45
MSX1-201ENST00000382723 LRSAM1Q6UWE0 723 aa30.34■■■□□ 2.45
MSX1-201ENST00000382723 GAS2L3Q86XJ1 694 aa30.34■■■□□ 2.45
MSX1-201ENST00000382723 MBOAT7Q96N66 472 aa30.34■■■□□ 2.45
MSX1-201ENST00000382723 PP2D1A8MPX8 630 aa30.34■■■□□ 2.45
MSX1-201ENST00000382723 ZBTB48P10074 688 aaPredicted RBP30.34■■■□□ 2.45
MSX1-201ENST00000382723 SAMD3Q8N6K7 520 aa30.34■■■□□ 2.45
MSX1-201ENST00000382723 BRI3BPQ8WY22 251 aa30.34■■■□□ 2.45
MSX1-201ENST00000382723 HAS1Q92839 578 aa30.34■■■□□ 2.45
MSX1-201ENST00000382723 CIITAP33076 1130 aa30.33■■■□□ 2.45
MSX1-201ENST00000382723 CYP2W1Q8TAV3 490 aa30.33■■■□□ 2.45
MSX1-201ENST00000382723 ZFP91Q96JP5 570 aaPredicted RBP30.33■■■□□ 2.45
MSX1-201ENST00000382723 PURBQ96QR8 312 aaKnown RBP30.33■■■□□ 2.45
MSX1-201ENST00000382723 TAAR1Q96RJ0 339 aa30.33■■■□□ 2.45
MSX1-201ENST00000382723 SPATC1LQ9H0A9 340 aa30.33■■■□□ 2.45
MSX1-201ENST00000382723 A0A087X0B3 334 aa30.32■■■□□ 2.44
MSX1-201ENST00000382723 KIF3CO14782 793 aa30.32■■■□□ 2.44
MSX1-201ENST00000382723 CYP2C8P10632 490 aa30.32■■■□□ 2.44
MSX1-201ENST00000382723 Q4G0T1 1027 aa30.32■■■□□ 2.44
MSX1-201ENST00000382723 BTBD19C9JJ37 291 aa30.32■■■□□ 2.44
MSX1-201ENST00000382723 CTAGE5O15320 804 aa30.32■■■□□ 2.44
MSX1-201ENST00000382723 CNMDO75829 334 aa30.32■■■□□ 2.44
MSX1-201ENST00000382723 TMEM266Q2M3C6 531 aa30.32■■■□□ 2.44
MSX1-201ENST00000382723 CNNM3Q8NE01 707 aa30.32■■■□□ 2.44
MSX1-201ENST00000382723 TIGD1Q96MW7 591 aa30.32■■■□□ 2.44
MSX1-201ENST00000382723 TTC12Q9H892 705 aaPredicted RBP30.32■■■□□ 2.44
MSX1-201ENST00000382723 PASKQ96RG2 1323 aa30.31■■■□□ 2.44
MSX1-201ENST00000382723 PDHXO00330 501 aa30.31■■■□□ 2.44
MSX1-201ENST00000382723 ZNF157P51786 506 aaPredicted RBP30.31■■■□□ 2.44
MSX1-201ENST00000382723 KRBA2Q6ZNG9 492 aa30.31■■■□□ 2.44
MSX1-201ENST00000382723 RIOX2Q8IUF8 465 aa30.31■■■□□ 2.44
MSX1-201ENST00000382723 ERCC4Q92889 916 aaPredicted RBP30.31■■■□□ 2.44
MSX1-201ENST00000382723 LENG9Q96B70 501 aa30.31■■■□□ 2.44
MSX1-201ENST00000382723 DHX58Q96C10 678 aa30.31■■■□□ 2.44
MSX1-201ENST00000382723 TXNRD2Q9NNW7 524 aa30.31■■■□□ 2.44
MSX1-201ENST00000382723 KCNMB3Q9NPA1 279 aa30.31■■■□□ 2.44
MSX1-201ENST00000382723 RBPJLQ9UBG7 517 aa30.31■■■□□ 2.44
MSX1-201ENST00000382723 SERTAD1Q9UHV2 236 aa30.31■■■□□ 2.44
MSX1-201ENST00000382723 PNMA3Q9UL41 463 aa30.31■■■□□ 2.44
MSX1-201ENST00000382723 RPTORQ8N122 1335 aa30.31■■■□□ 2.44
MSX1-201ENST00000382723 TXLNAP40222 546 aa30.3■■■□□ 2.44
MSX1-201ENST00000382723 NCAPG2Q86XI2 1143 aa30.3■■■□□ 2.44
MSX1-201ENST00000382723 CHST13Q8NET6 341 aa30.3■■■□□ 2.44
MSX1-201ENST00000382723 A1CFQ9NQ94 594 aaKnown RBP30.3■■■□□ 2.44
MSX1-201ENST00000382723 A0A0G2JMZ2 1700 aa30.3■■■□□ 2.44
MSX1-201ENST00000382723 EIF2AK2P19525 551 aaKnown RBP30.3■■■□□ 2.44
MSX1-201ENST00000382723 UBA7P41226 1012 aa30.3■■■□□ 2.44
MSX1-201ENST00000382723 FXR2P51116 673 aaKnown RBP eCLIP30.3■■■□□ 2.44
MSX1-201ENST00000382723 RBM43Q6ZSC3 357 aaKnown RBP30.3■■■□□ 2.44
MSX1-201ENST00000382723 IL31RAQ8NI17 732 aa30.3■■■□□ 2.44
MSX1-201ENST00000382723 AK8Q96MA6 479 aa30.3■■■□□ 2.44
MSX1-201ENST00000382723 RMDN3Q96TC7 470 aa30.3■■■□□ 2.44
MSX1-201ENST00000382723 SAPCD2Q86UD0 394 aa30.29■■■□□ 2.44
MSX1-201ENST00000382723 IGSF22Q8N9C0 903 aa30.29■■■□□ 2.44
MSX1-201ENST00000382723 MOV10L1Q9BXT6 1211 aaKnown RBP30.29■■■□□ 2.44
MSX1-201ENST00000382723 CYP39A1Q9NYL5 469 aa30.29■■■□□ 2.44
MSX1-201ENST00000382723 TRPM7Q96QT4 1865 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms