RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 GPRC5DQ9NZD1 345 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 PARP2Q9UGN5 583 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 ZNF609O15014 1411 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 PNMA6FA0A0J9YX94 578 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 TMEM238LA0A1B0GVL6 79 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 EIF1AYO14602 144 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 EREGO14944 169 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 SORBS3O60504 671 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 HIP1RO75146 1068 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 GHRHP01286 108 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 CYP2E1P05181 493 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 P4HBP07237 508 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 EDN3P14138 238 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 PEX19P40855 299 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 MAPK8P45983 427 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 EIF6P56537 245 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 EXOSC10Q01780 885 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 SERINC3Q13530 473 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 LRP8Q14114 963 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 DOC2BQ14184 412 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 SYCP2LQ5T4T6 812 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 TMC4Q7Z404 712 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 KRT77Q7Z794 578 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 CD163Q86VB7 1156 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 ZSCAN30Q86W11 494 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 ZNF654Q8IZM8 581 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 EDARADDQ8WWZ3 215 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 NSUN5Q96P11 429 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 ASB2Q96Q27 587 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 MDFIQ99750 246 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 KANSL3Q9P2N6 904 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 PUF60Q9UHX1 559 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 SCAF8Q9UPN6 1271 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 CTDP1Q9Y5B0 961 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 KDRP35968 1356 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 MYH14Q7Z406 1995 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 ZFHX2Q9C0A1 2572 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 BCORQ6W2J9 1755 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 ANKRD31Q8N7Z5 1873 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 CDC45O75419 566 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 BPNT1O95861 308 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 FGRP09769 529 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 CT47B1P0C2W7 299 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 EIF2AK2P19525 551 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 GMPSP49915 693 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 CCDC93Q567U6 631 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 TTLL5Q6EMB2 1281 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 ALG1LQ6GMV1 187 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 FAM109BQ6ICB4 259 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 CCDC70Q6NSX1 233 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 CC2D1AQ6P1N0 951 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 KRT26Q7Z3Y9 468 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 NCAPG2Q86XI2 1143 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 GALNT12Q8IXK2 581 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 ATL2Q8NHH9 583 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 FBF1Q8TES7 1133 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 MUC3BQ9H195 1237 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 PGAP2Q9UHJ9 254 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 SALL4Q9UJQ4 1053 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 TCF20Q9UGU0 1960 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 ITGB4P16144 1822 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 FAM208AQ9UK61 1670 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 PTPRZ1P23471 2315 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 ZNF318Q5VUA4 2279 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 ASTN2O75129 1339 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 KIF7Q2M1P5 1343 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 ADGRB1O14514 1584 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 MED19A0JLT2 244 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 PRPF40AO75400 957 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 FARP2O94887 1054 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 CPB1P15086 417 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 AMPD1P23109 780 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 CDC27P30260 824 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 CRKLP46109 303 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 EPHB1P54762 984 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 ACAP1Q15027 740 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 CCDC92Q53HC0 331 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 FAM35AQ86V20 835 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 IFNL3Q8IZI9 196 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 TTC30BQ8N4P2 665 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 UIMC1Q96RL1 719 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 MYCBPQ99417 103 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.22□□□□□ -1.737e-6■■■■□ 21.2
ECHDC1-205ENST00000368295 FRRS1LQ9P0K9 344 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 HDAC5Q9UQL6 1122 aa4.22□□□□□ -1.73
ECHDC1-205ENST00000368295 ACACBO00763 2458 aa4.21□□□□□ -1.73
ECHDC1-205ENST00000368295 MRC1P22897 1456 aa4.21□□□□□ -1.73
ECHDC1-205ENST00000368295 TTC21BQ7Z4L5 1316 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 SYNRGQ9UMZ2 1314 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 ZBTB42B2RXF5 422 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 UBE2Q2LH0YL09 131 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 SMIM22K7EJ46 135 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 TSPAN6O43657 245 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 POLR3DP05423 398 aaPredicted RBP4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 LDHBP07195 334 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 FBLN1P23142 703 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 TM4SF4P48230 202 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 PSMC1P62191 440 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 KRTAP1-1Q07627 177 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 NFE2Q16621 373 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms