RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 LRRC47Q8N1G4 583 aaKnown RBP20.95■□□□□ 0.94
PSPC1-201ENST00000338910 STAMQ92783 540 aa20.95■□□□□ 0.94
PSPC1-201ENST00000338910 PAGE5Q96GU1 130 aa20.95■□□□□ 0.94
PSPC1-201ENST00000338910 ZDHHC15Q96MV8 337 aa20.95■□□□□ 0.94
PSPC1-201ENST00000338910 SPZ1Q9BXG8 430 aa20.95■□□□□ 0.94
PSPC1-201ENST00000338910 FRMPD2Q68DX3 1309 aaPredicted RBP20.95■□□□□ 0.94
PSPC1-201ENST00000338910 CDC25AP30304 524 aa20.95■□□□□ 0.94
PSPC1-201ENST00000338910 MAP9Q49MG5 647 aa20.95■□□□□ 0.94
PSPC1-201ENST00000338910 SUGP1Q8IWZ8 645 aaKnown RBP20.95■□□□□ 0.94
PSPC1-201ENST00000338910 MCM3P25205 808 aa20.94■□□□□ 0.94
PSPC1-201ENST00000338910 NAPAP54920 295 aa20.94■□□□□ 0.94
PSPC1-201ENST00000338910 ZFPM1Q8IX07 1006 aa20.94■□□□□ 0.94
PSPC1-201ENST00000338910 COG1Q8WTW3 980 aa20.94■□□□□ 0.94
PSPC1-201ENST00000338910 RRP36Q96EU6 259 aaKnown RBP20.94■□□□□ 0.94
PSPC1-201ENST00000338910 PIGSQ96S52 555 aa20.94■□□□□ 0.94
PSPC1-201ENST00000338910 SLF1Q9BQI6 1058 aa20.94■□□□□ 0.94
PSPC1-201ENST00000338910 A0A087WUV0 522 aaPredicted RBP20.94■□□□□ 0.94
PSPC1-201ENST00000338910 PPIP5K2O43314 1243 aa20.94■□□□□ 0.94
PSPC1-201ENST00000338910 SHOX2O60902 331 aaPredicted RBP20.94■□□□□ 0.94
PSPC1-201ENST00000338910 CC2D2BQ6DHV5 1058 aa20.94■□□□□ 0.94
PSPC1-201ENST00000338910 SMYD4Q8IYR2 804 aaPredicted RBP20.94■□□□□ 0.94
PSPC1-201ENST00000338910 TTLL6Q8N841 843 aa20.94■□□□□ 0.94
PSPC1-201ENST00000338910 C4orf32Q8N8J7 132 aa20.94■□□□□ 0.94
PSPC1-201ENST00000338910 LRRC10BA6NIK2 292 aa20.93■□□□□ 0.94
PSPC1-201ENST00000338910 CCT6AP40227 531 aaKnown RBP20.93■□□□□ 0.94
PSPC1-201ENST00000338910 NOVP48745 357 aa20.93■□□□□ 0.94
PSPC1-201ENST00000338910 GSDMAQ96QA5 445 aa20.93■□□□□ 0.94
PSPC1-201ENST00000338910 REXO2Q9Y3B8 237 aaKnown RBP20.93■□□□□ 0.94
PSPC1-201ENST00000338910 C10orf71Q711Q0 1435 aa20.93■□□□□ 0.94
PSPC1-201ENST00000338910 PSMD14O00487 310 aa20.93■□□□□ 0.94
PSPC1-201ENST00000338910 PDHBP11177 359 aa20.93■□□□□ 0.94
PSPC1-201ENST00000338910 FKBP1AP62942 108 aaKnown RBP20.93■□□□□ 0.94
PSPC1-201ENST00000338910 DPYDQ12882 1025 aa20.93■□□□□ 0.94
PSPC1-201ENST00000338910 KRT31Q15323 416 aa20.93■□□□□ 0.94
PSPC1-201ENST00000338910 SEC63Q9UGP8 760 aaKnown RBP20.93■□□□□ 0.94
PSPC1-201ENST00000338910 LIMA1Q9UHB6 759 aaKnown RBP20.93■□□□□ 0.94
PSPC1-201ENST00000338910 TARSL2A2RTX5 802 aaKnown RBP20.92■□□□□ 0.94
PSPC1-201ENST00000338910 SMCO2A6NFE2 343 aa20.92■□□□□ 0.94
PSPC1-201ENST00000338910 YDJCA8MPS7 323 aa20.92■□□□□ 0.94
PSPC1-201ENST00000338910 TCP10Q12799 353 aa20.92■□□□□ 0.94
PSPC1-201ENST00000338910 GALNT17Q6IS24 598 aa20.92■□□□□ 0.94
PSPC1-201ENST00000338910 DAGLBQ8NCG7 672 aa20.92■□□□□ 0.94
PSPC1-201ENST00000338910 RIN2Q8WYP3 895 aaPredicted RBP20.92■□□□□ 0.94
PSPC1-201ENST00000338910 DRC1Q96MC2 740 aa20.92■□□□□ 0.94
PSPC1-201ENST00000338910 RNF216Q9NWF9 866 aaPredicted RBP20.92■□□□□ 0.94
PSPC1-201ENST00000338910 STIM1Q13586 685 aa20.92■□□□□ 0.94
PSPC1-201ENST00000338910 MRIQ9BWK5 157 aa20.92■□□□□ 0.94
PSPC1-201ENST00000338910 ZMYND12Q9H0C1 365 aa20.92■□□□□ 0.94
PSPC1-201ENST00000338910 TRIM10Q9UDY6 481 aa20.92■□□□□ 0.94
PSPC1-201ENST00000338910 MPHOSPH10O00566 681 aaKnown RBP20.91■□□□□ 0.94
PSPC1-201ENST00000338910 N4BP3O15049 544 aa20.91■□□□□ 0.94
PSPC1-201ENST00000338910 DPEP1P16444 411 aa20.91■□□□□ 0.94
PSPC1-201ENST00000338910 SHMT1P34896 483 aa20.91■□□□□ 0.94
PSPC1-201ENST00000338910 ATP2B2Q01814 1243 aa20.91■□□□□ 0.94
PSPC1-201ENST00000338910 TRIM14Q14142 442 aa20.91■□□□□ 0.94
PSPC1-201ENST00000338910 ARL6IP4Q66PJ3 421 aaKnown RBP20.91■□□□□ 0.94
PSPC1-201ENST00000338910 MMS22LQ6ZRQ5 1243 aa20.91■□□□□ 0.94
PSPC1-201ENST00000338910 SUPT20HQ8NEM7 779 aa20.91■□□□□ 0.94
PSPC1-201ENST00000338910 MMS19Q96T76 1030 aa20.91■□□□□ 0.94
PSPC1-201ENST00000338910 NUP88Q99567 741 aaPredicted RBP20.91■□□□□ 0.94
PSPC1-201ENST00000338910 NCAPGQ9BPX3 1015 aa20.91■□□□□ 0.94
PSPC1-201ENST00000338910 FAM107BQ9H098 131 aa20.91■□□□□ 0.94
PSPC1-201ENST00000338910 TMEM60Q9H2L4 133 aa20.91■□□□□ 0.94
PSPC1-201ENST00000338910 DEF6Q9H4E7 631 aa20.91■□□□□ 0.94
PSPC1-201ENST00000338910 GPCPD1Q9NPB8 672 aa20.91■□□□□ 0.94
PSPC1-201ENST00000338910 KCNA3P22001 575 aa20.9■□□□□ 0.94
PSPC1-201ENST00000338910 HDAC6Q9UBN7 1215 aa20.9■□□□□ 0.94
PSPC1-201ENST00000338910 GUCA1BQ9UMX6 200 aa20.9■□□□□ 0.94
PSPC1-201ENST00000338910 NDUFA10O95299 355 aa20.9■□□□□ 0.94
PSPC1-201ENST00000338910 HLA-DOAP06340 250 aa20.9■□□□□ 0.94
PSPC1-201ENST00000338910 KRT9P35527 623 aa20.9■□□□□ 0.94
PSPC1-201ENST00000338910 GGCXP38435 758 aa20.9■□□□□ 0.94
PSPC1-201ENST00000338910 CHP1Q99653 195 aa20.9■□□□□ 0.94
PSPC1-201ENST00000338910 SWAP70Q9UH65 585 aa20.9■□□□□ 0.94
PSPC1-201ENST00000338910 EPN1Q9Y6I3 576 aaPredicted RBP20.9■□□□□ 0.94
PSPC1-201ENST00000338910 IGKV6D-41A0A0C4DH26 115 aa20.89■□□□□ 0.94
PSPC1-201ENST00000338910 AGPSO00116 658 aa20.89■□□□□ 0.94
PSPC1-201ENST00000338910 ENC1O14682 589 aa20.89■□□□□ 0.94
PSPC1-201ENST00000338910 TTLL1O95922 423 aa20.89■□□□□ 0.94
PSPC1-201ENST00000338910 HDLBPQ00341 1268 aaKnown RBP20.89■□□□□ 0.94
PSPC1-201ENST00000338910 E2F4Q16254 413 aa20.89■□□□□ 0.94
PSPC1-201ENST00000338910 SOGA3Q5TF21 947 aa20.89■□□□□ 0.94
PSPC1-201ENST00000338910 BLZF1Q9H2G9 400 aa20.89■□□□□ 0.94
PSPC1-201ENST00000338910 C6orf50Q9HD87 102 aa20.89■□□□□ 0.94
PSPC1-201ENST00000338910 CTNND2Q9UQB3 1225 aa20.89■□□□□ 0.94
PSPC1-201ENST00000338910 FAM196BA6NMK8 535 aa20.89■□□□□ 0.93
PSPC1-201ENST00000338910 SMARCA1P28370 1054 aa20.89■□□□□ 0.93
PSPC1-201ENST00000338910 COPB1P53618 953 aaKnown RBP20.89■□□□□ 0.93
PSPC1-201ENST00000338910 PAPD7Q5XG87 772 aaKnown RBP20.89■□□□□ 0.93
PSPC1-201ENST00000338910 DTHD1Q6ZMT9 781 aa20.89■□□□□ 0.93
PSPC1-201ENST00000338910 HAUS4Q9H6D7 363 aa20.89■□□□□ 0.93
PSPC1-201ENST00000338910 RIOX1Q9H6W3 641 aa20.89■□□□□ 0.93
PSPC1-201ENST00000338910 SERPINA10Q9UK55 444 aa20.89■□□□□ 0.93
PSPC1-201ENST00000338910 SAR1BQ9Y6B6 198 aa20.89■□□□□ 0.93
PSPC1-201ENST00000338910 ZNF646O15015 1829 aaPredicted RBP20.89■□□□□ 0.93
PSPC1-201ENST00000338910 ATP1A1P05023 1023 aaKnown RBP20.88■□□□□ 0.93
PSPC1-201ENST00000338910 LONP1P36776 959 aaKnown RBP20.88■□□□□ 0.93
PSPC1-201ENST00000338910 SWT1Q5T5J6 900 aaKnown RBP20.88■□□□□ 0.93
PSPC1-201ENST00000338910 SLC16A10Q8TF71 515 aa20.88■□□□□ 0.93
PSPC1-201ENST00000338910 RPGRIP1Q96KN7 1286 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms