RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 ZC3H4Q9UPT8 1303 aaKnown RBP11.39□□□□□ -0.59
SF3B2-201ENST00000322535 GPAA1O43292 621 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 ATP4AP20648 1035 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 RPS6KB1P23443 525 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 MARCKSP29966 332 aaPredicted RBP11.39□□□□□ -0.59
SF3B2-201ENST00000322535 CHRNA5P30532 468 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 SLC8A1P32418 973 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 SPRED3Q2MJR0 410 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 ZMYM1Q5SVZ6 1142 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 NUGGCQ68CJ6 796 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 SYNE3Q6ZMZ3 975 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 Q6ZUG5 572 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 ADGRA1Q86SQ6 560 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 TTC30AQ86WT1 665 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 STAG2Q8N3U4 1231 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 ZNF473Q8WTR7 871 aaKnown RBP11.39□□□□□ -0.59
SF3B2-201ENST00000322535 MMS19Q96T76 1030 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 ARMT1Q9H993 441 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 UTP6Q9NYH9 597 aaKnown RBP11.39□□□□□ -0.59
SF3B2-201ENST00000322535 GUCA1BQ9UMX6 200 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 L3MBTL1Q9Y468 752 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 ATXN2Q99700 1313 aaKnown RBP11.38□□□□□ -0.59
SF3B2-201ENST00000322535 MED23Q9ULK4 1368 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 HIP1O00291 1037 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 VCAM1P19320 739 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 MATR3P43243 847 aaKnown RBP eCLIP11.38□□□□□ -0.59
SF3B2-201ENST00000322535 USP14P54578 494 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 WHAMMP3Q1A5X7 153 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 WDR93Q6P2C0 686 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 STOX1Q6ZVD7 989 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 NCOA5Q9HCD5 579 aaKnown RBP11.38□□□□□ -0.59
SF3B2-201ENST00000322535 PREBQ9HCU5 417 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 GPHNQ9NQX3 736 aaPredicted RBP11.38□□□□□ -0.59
SF3B2-201ENST00000322535 CLIC4Q9Y696 253 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 BCORQ6W2J9 1755 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 FOXP2O15409 715 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 PDE6AP16499 860 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 C14orf80Q86SX3 495 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 SPIRE2Q8WWL2 714 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 CLIP3Q96DZ5 547 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 TRIM11Q96F44 468 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 BPIFA3Q9BQP9 254 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 CORO1BQ9BR76 489 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 PPP1R1BQ9UD71 204 aaPredicted RBP11.38□□□□□ -0.59
SF3B2-201ENST00000322535 UBR3Q6ZT12 1888 aa11.38□□□□□ -0.59
SF3B2-201ENST00000322535 TNRC6CQ9HCJ0 1690 aaKnown RBP11.37□□□□□ -0.59
SF3B2-201ENST00000322535 C6orf229H3BNL8 230 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 E2F6O75461 281 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 PARP1P09874 1014 aaKnown RBP11.37□□□□□ -0.59
SF3B2-201ENST00000322535 ADRA2BP18089 450 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 LSP1P33241 339 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 CTCFP49711 727 aaPredicted RBP11.37□□□□□ -0.59
SF3B2-201ENST00000322535 GPSM2P81274 684 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 ADCY1Q08828 1119 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 ENOX2Q16206 610 aaKnown RBP11.37□□□□□ -0.59
SF3B2-201ENST00000322535 CAVIN4Q5BKX8 364 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 PNMA8AQ86V59 439 aaPredicted RBP11.37□□□□□ -0.59
SF3B2-201ENST00000322535 NOC3LQ8WTT2 800 aaKnown RBP11.37□□□□□ -0.59
SF3B2-201ENST00000322535 TEKT1Q969V4 418 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 TRIM10Q9UDY6 481 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 FRMD4BQ9Y2L6 1034 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 ZNF804BA4D1E1 1349 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 A6NHS1 94 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 KRT14P02533 472 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 FGAP02671 866 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 PRDX5P30044 214 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 EVX2Q03828 476 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 GRIK5Q16478 980 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 PPFIBP1Q86W92 1011 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 TRIML1Q8N9V2 468 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 SDR42E1Q8WUS8 393 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 CCT8L2Q96SF2 557 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 UBAP1Q9NZ09 502 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 LNPEPQ9UIQ6 1025 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 HOOK1Q9UJC3 728 aaKnown RBP11.37□□□□□ -0.59
SF3B2-201ENST00000322535 SYNPO2Q9UMS6 1093 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 ITM2BQ9Y287 266 aa11.37□□□□□ -0.59
SF3B2-201ENST00000322535 AKR1B15C9JRZ8 316 aaPredicted RBP11.36□□□□□ -0.59
SF3B2-201ENST00000322535 DNM1LO00429 736 aa11.36□□□□□ -0.59
SF3B2-201ENST00000322535 IKBKBO14920 756 aa11.36□□□□□ -0.59
SF3B2-201ENST00000322535 CLTAP09496 248 aa11.36□□□□□ -0.59
SF3B2-201ENST00000322535 HPDP32754 393 aaPredicted RBP11.36□□□□□ -0.59
SF3B2-201ENST00000322535 GRAPQ13588 217 aa11.36□□□□□ -0.59
SF3B2-201ENST00000322535 TTMPQ5BVD1 217 aa11.36□□□□□ -0.59
SF3B2-201ENST00000322535 MAEAQ7L5Y9 396 aa11.36□□□□□ -0.59
SF3B2-201ENST00000322535 GRAPLQ8TC17 118 aaPredicted RBP11.36□□□□□ -0.59
SF3B2-201ENST00000322535 CCDC47Q96A33 483 aaKnown RBP11.36□□□□□ -0.59
SF3B2-201ENST00000322535 RNPC3Q96LT9 517 aaKnown RBP11.36□□□□□ -0.59
SF3B2-201ENST00000322535 CAMKK2Q96RR4 588 aa11.36□□□□□ -0.59
SF3B2-201ENST00000322535 DUSP9Q99956 384 aaKnown RBP11.36□□□□□ -0.59
SF3B2-201ENST00000322535 BRD8Q9H0E9 1235 aa11.36□□□□□ -0.59
SF3B2-201ENST00000322535 GALNT8Q9NY28 637 aa11.36□□□□□ -0.59
SF3B2-201ENST00000322535 TFR2Q9UP52 801 aa11.36□□□□□ -0.59
SF3B2-201ENST00000322535 STK24Q9Y6E0 443 aa11.36□□□□□ -0.59
SF3B2-201ENST00000322535 UFL1O94874 794 aa11.36□□□□□ -0.59
SF3B2-201ENST00000322535 TUBBP07437 444 aa11.36□□□□□ -0.59
SF3B2-201ENST00000322535 ADD2P35612 726 aa11.36□□□□□ -0.59
SF3B2-201ENST00000322535 BTG3Q14201 252 aaPredicted RBP11.36□□□□□ -0.59
SF3B2-201ENST00000322535 SLC15A2Q16348 729 aa11.36□□□□□ -0.59
SF3B2-201ENST00000322535 HIBCHQ6NVY1 386 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms