RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 CCDC170Q8IYT3 715 aa28■■■□□ 2.07
ROM1-201ENST00000278833 CNOT6LQ96LI5 555 aaKnown RBP28■■■□□ 2.07
ROM1-201ENST00000278833 RAB34Q9BZG1 259 aa28■■■□□ 2.07
ROM1-201ENST00000278833 SLC26A4O43511 780 aa27.99■■■□□ 2.07
ROM1-201ENST00000278833 ZBED6P86452 979 aa27.99■■■□□ 2.07
ROM1-201ENST00000278833 GRB10Q13322 594 aa27.99■■■□□ 2.07
ROM1-201ENST00000278833 TSR1Q2NL82 804 aaKnown RBP27.99■■■□□ 2.07
ROM1-201ENST00000278833 UNC13DQ70J99 1090 aa27.99■■■□□ 2.07
ROM1-201ENST00000278833 POTEDQ86YR6 584 aa27.99■■■□□ 2.07
ROM1-201ENST00000278833 CHP1Q99653 195 aa27.99■■■□□ 2.07
ROM1-201ENST00000278833 LRRC27Q9C0I9 530 aa27.99■■■□□ 2.07
ROM1-201ENST00000278833 BLOC1S4Q9NUP1 217 aa27.99■■■□□ 2.07
ROM1-201ENST00000278833 KRT83P78385 493 aa27.98■■■□□ 2.07
ROM1-201ENST00000278833 STK4Q13043 487 aa27.98■■■□□ 2.07
ROM1-201ENST00000278833 TMEM266Q2M3C6 531 aa27.98■■■□□ 2.07
ROM1-201ENST00000278833 PPP4R3AQ6IN85 833 aa27.98■■■□□ 2.07
ROM1-201ENST00000278833 EHBP1Q8NDI1 1231 aa27.98■■■□□ 2.07
ROM1-201ENST00000278833 SLF1Q9BQI6 1058 aa27.98■■■□□ 2.07
ROM1-201ENST00000278833 MTMR7Q9Y216 660 aa27.98■■■□□ 2.07
ROM1-201ENST00000278833 COL11A2P13942 1736 aaPredicted RBP27.98■■■□□ 2.07
ROM1-201ENST00000278833 TECP42680 631 aa27.98■■■□□ 2.07
ROM1-201ENST00000278833 CALCRLQ16602 461 aa27.98■■■□□ 2.07
ROM1-201ENST00000278833 ANKRD40Q6AI12 368 aa27.98■■■□□ 2.07
ROM1-201ENST00000278833 SV2BQ7L1I2 683 aa27.98■■■□□ 2.07
ROM1-201ENST00000278833 KIAA0895Q8NCT3 520 aa27.98■■■□□ 2.07
ROM1-201ENST00000278833 RIC8AQ9NPQ8 531 aa27.98■■■□□ 2.07
ROM1-201ENST00000278833 CLK2P49760 499 aaKnown RBP27.97■■■□□ 2.07
ROM1-201ENST00000278833 TMEM119Q4V9L6 283 aa27.97■■■□□ 2.07
ROM1-201ENST00000278833 MIIPQ5JXC2 388 aa27.97■■■□□ 2.07
ROM1-201ENST00000278833 PNMA5Q96PV4 448 aa27.97■■■□□ 2.07
ROM1-201ENST00000278833 PLIN2Q99541 437 aa27.97■■■□□ 2.07
ROM1-201ENST00000278833 ANKZF1Q9H8Y5 726 aa27.97■■■□□ 2.07
ROM1-201ENST00000278833 B4DLN1 442 aa27.96■■■□□ 2.07
ROM1-201ENST00000278833 EDIL3O43854 480 aa27.96■■■□□ 2.07
ROM1-201ENST00000278833 HNRNPH3P31942 346 aaKnown RBP27.96■■■□□ 2.07
ROM1-201ENST00000278833 CYLC1P35663 651 aaPredicted RBP27.96■■■□□ 2.07
ROM1-201ENST00000278833 ZNF543Q08ER8 600 aa27.96■■■□□ 2.07
ROM1-201ENST00000278833 GUF1Q8N442 669 aaKnown RBP27.96■■■□□ 2.07
ROM1-201ENST00000278833 ZNF622Q969S3 477 aaKnown RBP eCLIP27.96■■■□□ 2.07
ROM1-201ENST00000278833 BIN2Q9UBW5 565 aaPredicted RBP27.96■■■□□ 2.07
ROM1-201ENST00000278833 PNMA6FA0A0J9YX94 578 aa27.95■■■□□ 2.07
ROM1-201ENST00000278833 RASSF10A6NK89 507 aa27.95■■■□□ 2.07
ROM1-201ENST00000278833 EIF3CLB5ME19 914 aaKnown RBP27.95■■■□□ 2.07
ROM1-201ENST00000278833 TTLL1O95922 423 aa27.95■■■□□ 2.07
ROM1-201ENST00000278833 HERVK_113P62684 666 aa27.95■■■□□ 2.07
ROM1-201ENST00000278833 MTMR8Q96EF0 704 aa27.95■■■□□ 2.07
ROM1-201ENST00000278833 MASTLQ96GX5 879 aa27.95■■■□□ 2.07
ROM1-201ENST00000278833 EIF3CQ99613 913 aaKnown RBP27.95■■■□□ 2.07
ROM1-201ENST00000278833 FUT8Q9BYC5 575 aa27.95■■■□□ 2.07
ROM1-201ENST00000278833 LRWD1Q9UFC0 647 aa27.95■■■□□ 2.07
ROM1-201ENST00000278833 MYH4Q9Y623 1939 aa27.95■■■□□ 2.07
ROM1-201ENST00000278833 SEC31AO94979 1220 aaKnown RBP27.95■■■□□ 2.06
ROM1-201ENST00000278833 EHHADHQ08426 723 aa27.95■■■□□ 2.06
ROM1-201ENST00000278833 PSMD2Q13200 908 aa27.95■■■□□ 2.06
ROM1-201ENST00000278833 SEPT2Q15019 361 aa27.95■■■□□ 2.06
ROM1-201ENST00000278833 TRAPPC11Q7Z392 1133 aa27.95■■■□□ 2.06
ROM1-201ENST00000278833 LARP4BQ92615 738 aaKnown RBP27.95■■■□□ 2.06
ROM1-201ENST00000278833 NAP1L4Q99733 375 aaKnown RBP27.95■■■□□ 2.06
ROM1-201ENST00000278833 PIM2Q9P1W9 311 aa27.95■■■□□ 2.06
ROM1-201ENST00000278833 MAP2K7O14733 419 aa27.94■■■□□ 2.06
ROM1-201ENST00000278833 SASH3O75995 380 aa27.94■■■□□ 2.06
ROM1-201ENST00000278833 FGFR1OPO95684 399 aaKnown RBP27.94■■■□□ 2.06
ROM1-201ENST00000278833 AKR1B1P15121 316 aa27.94■■■□□ 2.06
ROM1-201ENST00000278833 NPR1P16066 1061 aa27.94■■■□□ 2.06
ROM1-201ENST00000278833 TBC1D8BQ0IIM8 1120 aa27.94■■■□□ 2.06
ROM1-201ENST00000278833 GPATCH4Q5T3I0 446 aaKnown RBP27.94■■■□□ 2.06
ROM1-201ENST00000278833 PKNOX2Q96KN3 472 aa27.94■■■□□ 2.06
ROM1-201ENST00000278833 UBA5Q9GZZ9 404 aa27.94■■■□□ 2.06
ROM1-201ENST00000278833 EPC1Q9H2F5 836 aa27.94■■■□□ 2.06
ROM1-201ENST00000278833 TMEM260Q9NX78 707 aa27.94■■■□□ 2.06
ROM1-201ENST00000278833 ATP6V0A2Q9Y487 856 aa27.94■■■□□ 2.06
ROM1-201ENST00000278833 CTAGE15A4D2H0 777 aa27.93■■■□□ 2.06
ROM1-201ENST00000278833 PPEF1O14829 653 aaPredicted RBP27.93■■■□□ 2.06
ROM1-201ENST00000278833 CTAGE8P0CG41 777 aa27.93■■■□□ 2.06
ROM1-201ENST00000278833 GCFC2P16383 781 aaKnown RBP27.93■■■□□ 2.06
ROM1-201ENST00000278833 LRRC63Q05C16 580 aa27.93■■■□□ 2.06
ROM1-201ENST00000278833 CTAGE6Q86UF2 777 aa27.93■■■□□ 2.06
ROM1-201ENST00000278833 CTAGE4Q8IX94 777 aa27.93■■■□□ 2.06
ROM1-201ENST00000278833 RAD54LQ92698 747 aa27.93■■■□□ 2.06
ROM1-201ENST00000278833 ZNHIT6Q9NWK9 470 aaKnown RBP27.93■■■□□ 2.06
ROM1-201ENST00000278833 MYO6Q9UM54 1294 aa27.93■■■□□ 2.06
ROM1-201ENST00000278833 ABL1P00519 1130 aa27.93■■■□□ 2.06
ROM1-201ENST00000278833 FCER1AP12319 257 aa27.93■■■□□ 2.06
ROM1-201ENST00000278833 HYIQ5T013 277 aa27.93■■■□□ 2.06
ROM1-201ENST00000278833 FKBP15Q5T1M5 1219 aa27.93■■■□□ 2.06
ROM1-201ENST00000278833 STYK1Q6J9G0 422 aa27.93■■■□□ 2.06
ROM1-201ENST00000278833 ARHGAP27Q6ZUM4 889 aa27.93■■■□□ 2.06
ROM1-201ENST00000278833 PURBQ96QR8 312 aaKnown RBP27.93■■■□□ 2.06
ROM1-201ENST00000278833 EHD4Q9H223 541 aa27.93■■■□□ 2.06
ROM1-201ENST00000278833 SEMA6BQ9H3T3 888 aa27.93■■■□□ 2.06
ROM1-201ENST00000278833 ARFGEF1Q9Y6D6 1849 aa27.92■■■□□ 2.06
ROM1-201ENST00000278833 BRCA1P38398 1863 aaKnown RBP27.92■■■□□ 2.06
ROM1-201ENST00000278833 MTIF2P46199 727 aaKnown RBP27.92■■■□□ 2.06
ROM1-201ENST00000278833 LONRF2Q1L5Z9 754 aa27.92■■■□□ 2.06
ROM1-201ENST00000278833 PAPD7Q5XG87 772 aaKnown RBP27.92■■■□□ 2.06
ROM1-201ENST00000278833 NOC4LQ9BVI4 516 aaKnown RBP27.92■■■□□ 2.06
ROM1-201ENST00000278833 GLT8D2Q9H1C3 349 aa27.92■■■□□ 2.06
ROM1-201ENST00000278833 VAT1LQ9HCJ6 419 aa27.92■■■□□ 2.06
ROM1-201ENST00000278833 SERPINB13Q9UIV8 391 aa27.92■■■□□ 2.06
ROM1-201ENST00000278833 FRMPD2Q68DX3 1309 aaPredicted RBP27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms