RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 LRWD1Q9UFC0 647 aa18.64■□□□□ 0.58
PDE4C-201ENST00000262805 TAF1LQ8IZX4 1826 aa18.64■□□□□ 0.57
PDE4C-201ENST00000262805 PDHBP11177 359 aa18.64■□□□□ 0.57
PDE4C-201ENST00000262805 ATP2B2Q01814 1243 aa18.64■□□□□ 0.57
PDE4C-201ENST00000262805 SEMA3FQ13275 785 aa18.64■□□□□ 0.57
PDE4C-201ENST00000262805 CENPPQ6IPU0 288 aa18.64■□□□□ 0.57
PDE4C-201ENST00000262805 CNNM4Q6P4Q7 775 aa18.64■□□□□ 0.57
PDE4C-201ENST00000262805 RETREG2Q8NC44 543 aa18.64■□□□□ 0.57
PDE4C-201ENST00000262805 CCDC47Q96A33 483 aaKnown RBP18.64■□□□□ 0.57
PDE4C-201ENST00000262805 CALML4Q96GE6 196 aa18.64■□□□□ 0.57
PDE4C-201ENST00000262805 FAM207AQ9NSI2 230 aaPredicted RBP18.64■□□□□ 0.57
PDE4C-201ENST00000262805 CALCRLQ16602 461 aa18.63■□□□□ 0.57
PDE4C-201ENST00000262805 MFSD14BQ5SR56 506 aa18.63■□□□□ 0.57
PDE4C-201ENST00000262805 ZNF662Q6ZS27 426 aa18.63■□□□□ 0.57
PDE4C-201ENST00000262805 FAM114A1Q8IWE2 563 aa18.63■□□□□ 0.57
PDE4C-201ENST00000262805 GSPT2Q8IYD1 628 aaKnown RBP18.63■□□□□ 0.57
PDE4C-201ENST00000262805 EXOC4Q96A65 974 aa18.63■□□□□ 0.57
PDE4C-201ENST00000262805 GDAP1L1Q96MZ0 367 aa18.63■□□□□ 0.57
PDE4C-201ENST00000262805 PURBQ96QR8 312 aaKnown RBP18.63■□□□□ 0.57
PDE4C-201ENST00000262805 HINFPQ9BQA5 517 aa18.63■□□□□ 0.57
PDE4C-201ENST00000262805 ZNF287Q9HBT7 754 aa18.63■□□□□ 0.57
PDE4C-201ENST00000262805 ARHGAP20Q9P2F6 1191 aa18.63■□□□□ 0.57
PDE4C-201ENST00000262805 PRR5LQ6MZQ0 368 aa18.63■□□□□ 0.57
PDE4C-201ENST00000262805 RIOX1Q9H6W3 641 aa18.63■□□□□ 0.57
PDE4C-201ENST00000262805 SIK3Q9Y2K2 1263 aa18.63■□□□□ 0.57
PDE4C-201ENST00000262805 AMPD3Q01432 767 aa18.62■□□□□ 0.57
PDE4C-201ENST00000262805 LRRC41Q15345 812 aa18.62■□□□□ 0.57
PDE4C-201ENST00000262805 SV2BQ7L1I2 683 aa18.62■□□□□ 0.57
PDE4C-201ENST00000262805 CCDC170Q8IYT3 715 aa18.62■□□□□ 0.57
PDE4C-201ENST00000262805 CCDC102AQ96A19 550 aa18.62■□□□□ 0.57
PDE4C-201ENST00000262805 CAPN6Q9Y6Q1 641 aa18.62■□□□□ 0.57
PDE4C-201ENST00000262805 MYBL2P10244 700 aa18.62■□□□□ 0.57
PDE4C-201ENST00000262805 IDEP14735 1019 aa18.62■□□□□ 0.57
PDE4C-201ENST00000262805 GPS2Q13227 327 aa18.62■□□□□ 0.57
PDE4C-201ENST00000262805 ECM1Q16610 540 aa18.62■□□□□ 0.57
PDE4C-201ENST00000262805 C2CD5Q86YS7 1000 aa18.62■□□□□ 0.57
PDE4C-201ENST00000262805 CCDC155Q8N6L0 562 aa18.62■□□□□ 0.57
PDE4C-201ENST00000262805 LARP4BQ92615 738 aaKnown RBP18.62■□□□□ 0.57
PDE4C-201ENST00000262805 UIMC1Q96RL1 719 aa18.62■□□□□ 0.57
PDE4C-201ENST00000262805 MLXIPQ9HAP2 919 aa18.62■□□□□ 0.57
PDE4C-201ENST00000262805 VAV2P52735 878 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 PICALMQ13492 652 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 VWA3BQ502W6 1294 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 FKBP15Q5T1M5 1219 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 FAM196AQ6ZSG2 479 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 C15orf52Q6ZUT6 534 aaKnown RBP18.61■□□□□ 0.57
PDE4C-201ENST00000262805 NDST4Q9H3R1 872 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 GPCPD1Q9NPB8 672 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 A0A1W2PQJ5 194 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 EIF3JO75822 258 aaKnown RBP18.61■□□□□ 0.57
PDE4C-201ENST00000262805 IL1R1P14778 569 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 NOVP48745 357 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 C2orf54Q08AI8 447 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 UBE2SQ16763 222 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 FIGNQ5HY92 759 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 TRAPPC3LQ5T215 181 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 UNC13DQ70J99 1090 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 MSL3Q8N5Y2 521 aaKnown RBP18.61■□□□□ 0.57
PDE4C-201ENST00000262805 CCDC42Q96M95 316 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 DRC1Q96MC2 740 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 GBP3Q9H0R5 595 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 JADE2Q9NQC1 790 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 THSD7AQ9UPZ6 1657 aa18.61■□□□□ 0.57
PDE4C-201ENST00000262805 ESYT2A0FGR8 921 aa18.6■□□□□ 0.57
PDE4C-201ENST00000262805 IPO7O95373 1038 aaKnown RBP18.6■□□□□ 0.57
PDE4C-201ENST00000262805 ZSCAN26Q16670 478 aa18.6■□□□□ 0.57
PDE4C-201ENST00000262805 CCDC96Q2M329 555 aa18.6■□□□□ 0.57
PDE4C-201ENST00000262805 COBLL1Q53SF7 1204 aa18.6■□□□□ 0.57
PDE4C-201ENST00000262805 RPGRQ92834 1020 aaKnown RBP18.6■□□□□ 0.57
PDE4C-201ENST00000262805 POLLQ9UGP5 575 aa18.6■□□□□ 0.57
PDE4C-201ENST00000262805 PLAGL2Q9UPG8 496 aa18.6■□□□□ 0.57
PDE4C-201ENST00000262805 ONECUT3O60422 494 aaPredicted RBP18.6■□□□□ 0.57
PDE4C-201ENST00000262805 PPP1R11O60927 126 aaPredicted RBP18.6■□□□□ 0.57
PDE4C-201ENST00000262805 AKR1B1P15121 316 aa18.6■□□□□ 0.57
PDE4C-201ENST00000262805 FXR2P51116 673 aaKnown RBP eCLIP18.6■□□□□ 0.57
PDE4C-201ENST00000262805 KIF5AQ12840 1032 aa18.6■□□□□ 0.57
PDE4C-201ENST00000262805 EHBP1Q8NDI1 1231 aa18.6■□□□□ 0.57
PDE4C-201ENST00000262805 SECISBP2LQ93073 1101 aaKnown RBP18.6■□□□□ 0.57
PDE4C-201ENST00000262805 MMRN2Q9H8L6 949 aa18.6■□□□□ 0.57
PDE4C-201ENST00000262805 MTMR4Q9NYA4 1195 aa18.6■□□□□ 0.57
PDE4C-201ENST00000262805 PSD3Q9NYI0 1048 aa18.6■□□□□ 0.57
PDE4C-201ENST00000262805 NHSQ6T4R5 1651 aa18.59■□□□□ 0.57
PDE4C-201ENST00000262805 SLURP2P0DP57 97 aa18.59■□□□□ 0.57
PDE4C-201ENST00000262805 ADCY7P51828 1080 aa18.59■□□□□ 0.57
PDE4C-201ENST00000262805 CDK17Q00537 523 aa18.59■□□□□ 0.57
PDE4C-201ENST00000262805 LRRC55Q6ZSA7 311 aa18.59■□□□□ 0.57
PDE4C-201ENST00000262805 CAGE1Q8TC20 777 aa18.59■□□□□ 0.57
PDE4C-201ENST00000262805 SNX29Q8TEQ0 813 aa18.59■□□□□ 0.57
PDE4C-201ENST00000262805 GGA1Q9UJY5 639 aa18.59■□□□□ 0.57
PDE4C-201ENST00000262805 MOCS3O95396 460 aa18.59■□□□□ 0.57
PDE4C-201ENST00000262805 SMARCA1P28370 1054 aa18.59■□□□□ 0.57
PDE4C-201ENST00000262805 EIF4A3P38919 411 aaKnown RBP18.59■□□□□ 0.57
PDE4C-201ENST00000262805 TNNT3P45378 269 aaPredicted RBP18.59■□□□□ 0.57
PDE4C-201ENST00000262805 TNNI2P48788 182 aa18.59■□□□□ 0.57
PDE4C-201ENST00000262805 MRPS25P82663 173 aaKnown RBP18.59■□□□□ 0.57
PDE4C-201ENST00000262805 COG1Q8WTW3 980 aa18.59■□□□□ 0.57
PDE4C-201ENST00000262805 RAD54LQ92698 747 aa18.59■□□□□ 0.57
PDE4C-201ENST00000262805 DDX12PQ92771 950 aa18.59■□□□□ 0.57
PDE4C-201ENST00000262805 CDK5RAP3Q96JB5 506 aa18.59■□□□□ 0.57
PDE4C-201ENST00000262805 IFIH1Q9BYX4 1025 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms