RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 PRKG1Q13976 671 aa24.27■■□□□ 1.48
SPAST-204ENST00000621856 SMARCE1Q969G3 411 aa24.27■■□□□ 1.48
SPAST-204ENST00000621856 AK8Q96MA6 479 aa24.27■■□□□ 1.48
SPAST-204ENST00000621856 DDX25Q9UHL0 483 aaKnown RBP24.27■■□□□ 1.48
SPAST-204ENST00000621856 PP2D1A8MPX8 630 aa24.27■■□□□ 1.48
SPAST-204ENST00000621856 GOLGA6L19H0YKK7 550 aa24.27■■□□□ 1.48
SPAST-204ENST00000621856 TXKP42681 527 aa24.27■■□□□ 1.48
SPAST-204ENST00000621856 AFMP43652 599 aa24.27■■□□□ 1.48
SPAST-204ENST00000621856 PRPF38AQ8NAV1 312 aaKnown RBP24.27■■□□□ 1.48
SPAST-204ENST00000621856 ZNF280CQ8ND82 737 aa24.27■■□□□ 1.48
SPAST-204ENST00000621856 PAGE5Q96GU1 130 aa24.27■■□□□ 1.48
SPAST-204ENST00000621856 EMILIN3Q9NT22 766 aa24.27■■□□□ 1.48
SPAST-204ENST00000621856 MRPL11Q9Y3B7 192 aaKnown RBP24.27■■□□□ 1.48
SPAST-204ENST00000621856 SMCHD1A6NHR9 2005 aa24.26■■□□□ 1.47
SPAST-204ENST00000621856 BECN2A8MW95 431 aa24.26■■□□□ 1.47
SPAST-204ENST00000621856 OPLAHO14841 1288 aa24.26■■□□□ 1.47
SPAST-204ENST00000621856 TECP42680 631 aa24.26■■□□□ 1.47
SPAST-204ENST00000621856 KARSQ15046 597 aaKnown RBP24.26■■□□□ 1.47
SPAST-204ENST00000621856 IQCB1Q15051 598 aa24.26■■□□□ 1.47
SPAST-204ENST00000621856 TMEM266Q2M3C6 531 aa24.26■■□□□ 1.47
SPAST-204ENST00000621856 PDLIM2Q96JY6 352 aa24.26■■□□□ 1.47
SPAST-204ENST00000621856 MTMR9Q96QG7 549 aa24.26■■□□□ 1.47
SPAST-204ENST00000621856 CCDC39Q9UFE4 941 aa24.26■■□□□ 1.47
SPAST-204ENST00000621856 ABCB11O95342 1321 aa24.25■■□□□ 1.47
SPAST-204ENST00000621856 ADM5C9JUS6 153 aa24.25■■□□□ 1.47
SPAST-204ENST00000621856 MARCH6O60337 910 aa24.25■■□□□ 1.47
SPAST-204ENST00000621856 SMC2O95347 1197 aa24.25■■□□□ 1.47
SPAST-204ENST00000621856 VCAM1P19320 739 aa24.25■■□□□ 1.47
SPAST-204ENST00000621856 HOXA13P31271 388 aaPredicted RBP24.25■■□□□ 1.47
SPAST-204ENST00000621856 STAT6P42226 847 aa24.25■■□□□ 1.47
SPAST-204ENST00000621856 USP11P51784 963 aa24.25■■□□□ 1.47
SPAST-204ENST00000621856 BACE1P56817 501 aa24.25■■□□□ 1.47
SPAST-204ENST00000621856 E2F4Q16254 413 aa24.25■■□□□ 1.47
SPAST-204ENST00000621856 TRIM44Q96DX7 344 aaPredicted RBP24.25■■□□□ 1.47
SPAST-204ENST00000621856 CCSER1Q9C0I3 900 aa24.25■■□□□ 1.47
SPAST-204ENST00000621856 ZHX2Q9Y6X8 837 aa24.25■■□□□ 1.47
SPAST-204ENST00000621856 NOL9Q5SY16 702 aaKnown RBP24.24■■□□□ 1.47
SPAST-204ENST00000621856 SH3RF1Q7Z6J0 888 aa24.24■■□□□ 1.47
SPAST-204ENST00000621856 CABP7Q86V35 215 aa24.24■■□□□ 1.47
SPAST-204ENST00000621856 LDHDQ86WU2 507 aa24.24■■□□□ 1.47
SPAST-204ENST00000621856 RPAP3Q9H6T3 665 aaPredicted RBP24.24■■□□□ 1.47
SPAST-204ENST00000621856 DISC1Q9NRI5 854 aa24.24■■□□□ 1.47
SPAST-204ENST00000621856 PHIPQ8WWQ0 1821 aa24.24■■□□□ 1.47
SPAST-204ENST00000621856 PIK3CDO00329 1044 aa24.24■■□□□ 1.47
SPAST-204ENST00000621856 FLOT1O75955 427 aa24.24■■□□□ 1.47
SPAST-204ENST00000621856 ADCY5O95622 1261 aa24.24■■□□□ 1.47
SPAST-204ENST00000621856 CFBP00751 764 aa24.24■■□□□ 1.47
SPAST-204ENST00000621856 ARHGAP4P98171 946 aa24.24■■□□□ 1.47
SPAST-204ENST00000621856 RRAGBQ5VZM2 374 aa24.24■■□□□ 1.47
SPAST-204ENST00000621856 TEX2Q8IWB9 1127 aa24.24■■□□□ 1.47
SPAST-204ENST00000621856 AOPEPQ8N6M6 819 aa24.24■■□□□ 1.47
SPAST-204ENST00000621856 L3MBTL3Q96JM7 780 aaPredicted RBP24.24■■□□□ 1.47
SPAST-204ENST00000621856 MAN1B1Q9UKM7 699 aa24.24■■□□□ 1.47
SPAST-204ENST00000621856 CCPG1Q9ULG6 757 aa24.24■■□□□ 1.47
SPAST-204ENST00000621856 GCOM1H8Y6P7 765 aaPredicted RBP24.23■■□□□ 1.47
SPAST-204ENST00000621856 USP2O75604 605 aaPredicted RBP24.23■■□□□ 1.47
SPAST-204ENST00000621856 POLR2MP0CAP2 368 aa24.23■■□□□ 1.47
SPAST-204ENST00000621856 PDXDC2PQ6P474 469 aa24.23■■□□□ 1.47
SPAST-204ENST00000621856 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.23■■□□□ 1.47
SPAST-204ENST00000621856 P2RX7Q99572 595 aaKnown RBP24.23■■□□□ 1.47
SPAST-204ENST00000621856 RAB34Q9BZG1 259 aa24.23■■□□□ 1.47
SPAST-204ENST00000621856 CTDP1Q9Y5B0 961 aaPredicted RBP24.23■■□□□ 1.47
SPAST-204ENST00000621856 ICAM1P05362 532 aa24.22■■□□□ 1.47
SPAST-204ENST00000621856 FXR2P51116 673 aaKnown RBP eCLIP24.22■■□□□ 1.47
SPAST-204ENST00000621856 NT5DC1Q5TFE4 455 aa24.22■■□□□ 1.47
SPAST-204ENST00000621856 DLK2Q6UY11 383 aa24.22■■□□□ 1.47
SPAST-204ENST00000621856 USP50Q70EL3 339 aaPredicted RBP24.22■■□□□ 1.47
SPAST-204ENST00000621856 KRT26Q7Z3Y9 468 aa24.22■■□□□ 1.47
SPAST-204ENST00000621856 FCHSD1Q86WN1 690 aa24.22■■□□□ 1.47
SPAST-204ENST00000621856 DHX40Q8IX18 779 aaKnown RBP24.22■■□□□ 1.47
SPAST-204ENST00000621856 BPIFA3Q9BQP9 254 aa24.22■■□□□ 1.47
SPAST-204ENST00000621856 EPHX2P34913 555 aa24.21■■□□□ 1.47
SPAST-204ENST00000621856 SREBF1P36956 1147 aa24.21■■□□□ 1.47
SPAST-204ENST00000621856 SARSP49591 514 aaKnown RBP24.21■■□□□ 1.47
SPAST-204ENST00000621856 MOXD1Q6UVY6 613 aa24.21■■□□□ 1.47
SPAST-204ENST00000621856 IGSF22Q8N9C0 903 aa24.21■■□□□ 1.47
SPAST-204ENST00000621856 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.21■■□□□ 1.47
SPAST-204ENST00000621856 PPP1R9AQ9ULJ8 1098 aa24.21■■□□□ 1.47
SPAST-204ENST00000621856 CYP3A7-CYP3A51PA0A087WV96 503 aa24.21■■□□□ 1.47
SPAST-204ENST00000621856 C19orf81C9J6K1 198 aa24.21■■□□□ 1.47
SPAST-204ENST00000621856 GRIN3BO60391 1043 aa24.21■■□□□ 1.47
SPAST-204ENST00000621856 CYP3A7P24462 503 aa24.21■■□□□ 1.47
SPAST-204ENST00000621856 TRIML1Q8N9V2 468 aa24.21■■□□□ 1.47
SPAST-204ENST00000621856 STAMQ92783 540 aa24.21■■□□□ 1.47
SPAST-204ENST00000621856 AGBL1Q96MI9 1066 aa24.21■■□□□ 1.47
SPAST-204ENST00000621856 PLIN2Q99541 437 aa24.21■■□□□ 1.47
SPAST-204ENST00000621856 LRWD1Q9UFC0 647 aa24.21■■□□□ 1.47
SPAST-204ENST00000621856 ZC3H4Q9UPT8 1303 aaKnown RBP24.2■■□□□ 1.47
SPAST-204ENST00000621856 AP5Z1O43299 807 aa24.2■■□□□ 1.46
SPAST-204ENST00000621856 PPP1R12BO60237 982 aaPredicted RBP24.2■■□□□ 1.46
SPAST-204ENST00000621856 HMGCS2P54868 508 aa24.2■■□□□ 1.46
SPAST-204ENST00000621856 MAP3K9P80192 1104 aa24.2■■□□□ 1.46
SPAST-204ENST00000621856 CRYGNQ8WXF5 182 aa24.2■■□□□ 1.46
SPAST-204ENST00000621856 TBC1D5Q92609 795 aa24.2■■□□□ 1.46
SPAST-204ENST00000621856 TTC12Q9H892 705 aaPredicted RBP24.2■■□□□ 1.46
SPAST-204ENST00000621856 ZNF536O15090 1300 aa24.2■■□□□ 1.46
SPAST-204ENST00000621856 ZBED4O75132 1171 aa24.19■■□□□ 1.46
SPAST-204ENST00000621856 CASP1P29466 404 aa24.19■■□□□ 1.46
SPAST-204ENST00000621856 DPYDQ12882 1025 aa24.19■■□□□ 1.46
SPAST-204ENST00000621856 CPXCR1Q8N123 301 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms