RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 QRICH1Q2TAL8 776 aa20.05■□□□□ 0.8
HMGN3-203ENST00000620514 KIAA1211Q6ZU35 1233 aa20.05■□□□□ 0.8
HMGN3-203ENST00000620514 TBC1D5Q92609 795 aa20.05■□□□□ 0.8
HMGN3-203ENST00000620514 VTI1AQ96AJ9 217 aa20.05■□□□□ 0.8
HMGN3-203ENST00000620514 GLT1D1Q96MS3 346 aa20.05■□□□□ 0.8
HMGN3-203ENST00000620514 JMJD4Q9H9V9 463 aa20.05■□□□□ 0.8
HMGN3-203ENST00000620514 SENP2Q9HC62 589 aa20.05■□□□□ 0.8
HMGN3-203ENST00000620514 ELP1O95163 1332 aa20.04■□□□□ 0.8
HMGN3-203ENST00000620514 DHX16O60231 1041 aaKnown RBP20.04■□□□□ 0.8
HMGN3-203ENST00000620514 FAAP100Q0VG06 881 aa20.04■□□□□ 0.8
HMGN3-203ENST00000620514 IQSEC1Q6DN90 963 aa20.04■□□□□ 0.8
HMGN3-203ENST00000620514 CHST3Q7LGC8 479 aa20.04■□□□□ 0.8
HMGN3-203ENST00000620514 ANKRD33Q7Z3H0 272 aa20.04■□□□□ 0.8
HMGN3-203ENST00000620514 MAP4K1Q92918 833 aa20.04■□□□□ 0.8
HMGN3-203ENST00000620514 RBM8AQ9Y5S9 174 aaKnown RBP20.04■□□□□ 0.8
HMGN3-203ENST00000620514 ABCB11O95342 1321 aa20.03■□□□□ 0.8
HMGN3-203ENST00000620514 KIAA0355O15063 1070 aa20.03■□□□□ 0.8
HMGN3-203ENST00000620514 CDK7P50613 346 aa20.03■□□□□ 0.8
HMGN3-203ENST00000620514 CXCL17Q6UXB2 119 aa20.03■□□□□ 0.8
HMGN3-203ENST00000620514 TOX2Q96NM4 488 aa20.03■□□□□ 0.8
HMGN3-203ENST00000620514 AP5M1Q9H0R1 490 aa20.03■□□□□ 0.8
HMGN3-203ENST00000620514 MAD2L2Q9UI95 211 aa20.03■□□□□ 0.8
HMGN3-203ENST00000620514 LOC102724159A0A0B4J2E5 919 aa20.02■□□□□ 0.8
HMGN3-203ENST00000620514 A0A0U1RQG5 324 aaPredicted RBP20.02■□□□□ 0.8
HMGN3-203ENST00000620514 IFIT3O14879 490 aaKnown RBP20.02■□□□□ 0.8
HMGN3-203ENST00000620514 PWP2Q15269 919 aaKnown RBP20.02■□□□□ 0.8
HMGN3-203ENST00000620514 FSCN1Q16658 493 aaKnown RBP20.02■□□□□ 0.8
HMGN3-203ENST00000620514 C9orf50Q5SZB4 431 aa20.02■□□□□ 0.8
HMGN3-203ENST00000620514 RALYLQ86SE5 291 aaKnown RBP20.02■□□□□ 0.8
HMGN3-203ENST00000620514 FBXO11Q86XK2 927 aa20.02■□□□□ 0.8
HMGN3-203ENST00000620514 RGS22Q8NE09 1264 aa20.02■□□□□ 0.8
HMGN3-203ENST00000620514 NCOA7Q8NI08 942 aa20.02■□□□□ 0.8
HMGN3-203ENST00000620514 TMEM39AQ9NV64 488 aa20.02■□□□□ 0.8
HMGN3-203ENST00000620514 PALM3A6NDB9 673 aaPredicted RBP20.01■□□□□ 0.79
HMGN3-203ENST00000620514 DCDC2CA8MYV0 355 aa20.01■□□□□ 0.79
HMGN3-203ENST00000620514 KLRF2D3W0D1 207 aa20.01■□□□□ 0.79
HMGN3-203ENST00000620514 ARVCFO00192 962 aa20.01■□□□□ 0.79
HMGN3-203ENST00000620514 EDNRBP24530 442 aa20.01■□□□□ 0.79
HMGN3-203ENST00000620514 ANTXR2P58335 489 aa20.01■□□□□ 0.79
HMGN3-203ENST00000620514 PDE4DQ08499 809 aa20.01■□□□□ 0.79
HMGN3-203ENST00000620514 SHHQ15465 462 aa20.01■□□□□ 0.79
HMGN3-203ENST00000620514 SLC35G1Q2M3R5 365 aa20.01■□□□□ 0.79
HMGN3-203ENST00000620514 DUSP28Q4G0W2 176 aa20.01■□□□□ 0.79
HMGN3-203ENST00000620514 WDR11Q9BZH6 1224 aa20.01■□□□□ 0.79
HMGN3-203ENST00000620514 LSG1Q9H089 658 aaKnown RBP20.01■□□□□ 0.79
HMGN3-203ENST00000620514 COL20A1Q9P218 1284 aa20.01■□□□□ 0.79
HMGN3-203ENST00000620514 Q9Y3F1 56 aa20.01■□□□□ 0.79
HMGN3-203ENST00000620514 RBM47A0AV96 593 aaKnown RBP20■□□□□ 0.79
HMGN3-203ENST00000620514 PPP1R11O60927 126 aaPredicted RBP20■□□□□ 0.79
HMGN3-203ENST00000620514 RAG1P15918 1043 aa20■□□□□ 0.79
HMGN3-203ENST00000620514 EPHB4P54760 987 aa20■□□□□ 0.79
HMGN3-203ENST00000620514 GRM4Q14833 912 aa20■□□□□ 0.79
HMGN3-203ENST00000620514 WTAPQ15007 396 aa20■□□□□ 0.79
HMGN3-203ENST00000620514 Q7L0L9 218 aa20■□□□□ 0.79
HMGN3-203ENST00000620514 CENPQQ7L2Z9 268 aaPredicted RBP20■□□□□ 0.79
HMGN3-203ENST00000620514 MB21D2Q8IYB1 491 aaPredicted RBP20■□□□□ 0.79
HMGN3-203ENST00000620514 DNERQ8NFT8 737 aa20■□□□□ 0.79
HMGN3-203ENST00000620514 SYTL5Q8TDW5 730 aaPredicted RBP20■□□□□ 0.79
HMGN3-203ENST00000620514 TAAR1Q96RJ0 339 aa20■□□□□ 0.79
HMGN3-203ENST00000620514 ESYT1Q9BSJ8 1104 aa20■□□□□ 0.79
HMGN3-203ENST00000620514 ERICH2A1L162 156 aa19.99■□□□□ 0.79
HMGN3-203ENST00000620514 MTMR8Q96EF0 704 aa19.99■□□□□ 0.79
HMGN3-203ENST00000620514 TBX21Q9UL17 535 aa19.99■□□□□ 0.79
HMGN3-203ENST00000620514 MRPL11Q9Y3B7 192 aaKnown RBP19.99■□□□□ 0.79
HMGN3-203ENST00000620514 GRIN2DO15399 1336 aa19.99■□□□□ 0.79
HMGN3-203ENST00000620514 MYH6P13533 1939 aa19.98■□□□□ 0.79
HMGN3-203ENST00000620514 OPLAHO14841 1288 aa19.98■□□□□ 0.79
HMGN3-203ENST00000620514 ZEB2O60315 1214 aa19.98■□□□□ 0.79
HMGN3-203ENST00000620514 COL9A3Q14050 684 aaPredicted RBP19.98■□□□□ 0.79
HMGN3-203ENST00000620514 TMEM67Q5HYA8 995 aa19.98■□□□□ 0.79
HMGN3-203ENST00000620514 FAM126BQ8IXS8 530 aa19.98■□□□□ 0.79
HMGN3-203ENST00000620514 IGDCC4Q8TDY8 1250 aa19.98■□□□□ 0.79
HMGN3-203ENST00000620514 COPS5Q92905 334 aa19.98■□□□□ 0.79
HMGN3-203ENST00000620514 AMNQ9BXJ7 453 aa19.98■□□□□ 0.79
HMGN3-203ENST00000620514 GPHNQ9NQX3 736 aaPredicted RBP19.98■□□□□ 0.79
HMGN3-203ENST00000620514 MROH7Q68CQ1 1323 aa19.98■□□□□ 0.79
HMGN3-203ENST00000620514 ZBTB5O15062 677 aa19.97■□□□□ 0.79
HMGN3-203ENST00000620514 CABYRO75952 493 aa19.97■□□□□ 0.79
HMGN3-203ENST00000620514 PSMC6P62333 389 aa19.97■□□□□ 0.79
HMGN3-203ENST00000620514 TROAPQ12815 778 aa19.97■□□□□ 0.79
HMGN3-203ENST00000620514 ITGA7Q13683 1181 aa19.97■□□□□ 0.79
HMGN3-203ENST00000620514 SART3Q15020 963 aaKnown RBP19.97■□□□□ 0.79
HMGN3-203ENST00000620514 GPR153Q6NV75 609 aa19.97■□□□□ 0.79
HMGN3-203ENST00000620514 HOMER1Q86YM7 354 aa19.97■□□□□ 0.79
HMGN3-203ENST00000620514 MCF2L2Q86YR7 1114 aa19.97■□□□□ 0.79
HMGN3-203ENST00000620514 DEFB123Q8N688 67 aa19.97■□□□□ 0.79
HMGN3-203ENST00000620514 SLC43A3Q8NBI5 491 aa19.97■□□□□ 0.79
HMGN3-203ENST00000620514 OR6J1Q8NGC5 347 aa19.97■□□□□ 0.79
HMGN3-203ENST00000620514 MPHOSPH6Q99547 160 aaKnown RBP19.97■□□□□ 0.79
HMGN3-203ENST00000620514 SLC27A2O14975 620 aa19.96■□□□□ 0.79
HMGN3-203ENST00000620514 CYTH3O43739 400 aa19.96■□□□□ 0.79
HMGN3-203ENST00000620514 ARIH2O95376 493 aa19.96■□□□□ 0.79
HMGN3-203ENST00000620514 CFBP00751 764 aa19.96■□□□□ 0.79
HMGN3-203ENST00000620514 TIMP1P01033 207 aa19.96■□□□□ 0.79
HMGN3-203ENST00000620514 FPGSQ05932 587 aa19.96■□□□□ 0.79
HMGN3-203ENST00000620514 PPP2R5BQ15173 497 aa19.96■□□□□ 0.79
HMGN3-203ENST00000620514 BMP2KLQ5H9B9 411 aa19.96■□□□□ 0.79
HMGN3-203ENST00000620514 SCFD2Q8WU76 684 aa19.96■□□□□ 0.79
HMGN3-203ENST00000620514 PIGSQ96S52 555 aa19.96■□□□□ 0.79
HMGN3-203ENST00000620514 RIOX1Q9H6W3 641 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms