RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 UBE2SQ16763 222 aa17.68■□□□□ 0.42
NR1H3-235ENST00000616973 MCTP2Q6DN12 878 aa17.68■□□□□ 0.42
NR1H3-235ENST00000616973 GMLQ99445 158 aa17.68■□□□□ 0.42
NR1H3-235ENST00000616973 PLIN2Q99541 437 aa17.68■□□□□ 0.42
NR1H3-235ENST00000616973 TRIM9Q9C026 710 aa17.68■□□□□ 0.42
NR1H3-235ENST00000616973 TMOD2Q9NZR1 351 aa17.68■□□□□ 0.42
NR1H3-235ENST00000616973 F5H6K3 240 aa17.67■□□□□ 0.42
NR1H3-235ENST00000616973 TEX33O43247 280 aa17.67■□□□□ 0.42
NR1H3-235ENST00000616973 TNNI2P48788 182 aa17.67■□□□□ 0.42
NR1H3-235ENST00000616973 KLRC3Q07444 240 aa17.67■□□□□ 0.42
NR1H3-235ENST00000616973 GRB10Q13322 594 aa17.67■□□□□ 0.42
NR1H3-235ENST00000616973 CDC37Q16543 378 aaPredicted RBP17.67■□□□□ 0.42
NR1H3-235ENST00000616973 SHROOM1Q2M3G4 852 aaPredicted RBP17.67■□□□□ 0.42
NR1H3-235ENST00000616973 COBLL1Q53SF7 1204 aa17.67■□□□□ 0.42
NR1H3-235ENST00000616973 RBM26Q5T8P6 1007 aaKnown RBP17.67■□□□□ 0.42
NR1H3-235ENST00000616973 ANKRD20A12PQ8NF67 263 aa17.67■□□□□ 0.42
NR1H3-235ENST00000616973 DHTKD1Q96HY7 919 aaPredicted RBP17.67■□□□□ 0.42
NR1H3-235ENST00000616973 SPDYE2BA6NHP3 402 aa17.66■□□□□ 0.42
NR1H3-235ENST00000616973 CTIFO43310 598 aaKnown RBP17.66■□□□□ 0.42
NR1H3-235ENST00000616973 SPDYE6P0CI01 402 aa17.66■□□□□ 0.42
NR1H3-235ENST00000616973 HOXA7P31268 230 aaPredicted RBP17.66■□□□□ 0.42
NR1H3-235ENST00000616973 KRT31Q15323 416 aa17.66■□□□□ 0.42
NR1H3-235ENST00000616973 PTPN21Q16825 1174 aa17.66■□□□□ 0.42
NR1H3-235ENST00000616973 SLC16A10Q8TF71 515 aa17.66■□□□□ 0.42
NR1H3-235ENST00000616973 PANX2Q96RD6 677 aa17.66■□□□□ 0.42
NR1H3-235ENST00000616973 BAG1Q99933 345 aaPredicted RBP17.66■□□□□ 0.42
NR1H3-235ENST00000616973 HDAC9Q9UKV0 1011 aa17.66■□□□□ 0.42
NR1H3-235ENST00000616973 PSMA7O14818 248 aa17.66■□□□□ 0.42
NR1H3-235ENST00000616973 GDF11O95390 407 aa17.66■□□□□ 0.42
NR1H3-235ENST00000616973 USP11P51784 963 aa17.66■□□□□ 0.42
NR1H3-235ENST00000616973 TCP11X2Q5H9J9 407 aa17.66■□□□□ 0.42
NR1H3-235ENST00000616973 BTNL9Q6UXG8 535 aa17.66■□□□□ 0.42
NR1H3-235ENST00000616973 CSRNP1Q96S65 589 aa17.66■□□□□ 0.42
NR1H3-235ENST00000616973 PCDHA1Q9Y5I3 950 aa17.66■□□□□ 0.42
NR1H3-235ENST00000616973 COL4A5P29400 1685 aa17.66■□□□□ 0.42
NR1H3-235ENST00000616973 KCNJ18B7U540 433 aa17.65■□□□□ 0.42
NR1H3-235ENST00000616973 NDUFB10O96000 172 aa17.65■□□□□ 0.42
NR1H3-235ENST00000616973 KCNA3P22001 575 aa17.65■□□□□ 0.42
NR1H3-235ENST00000616973 AP3B2Q13367 1082 aa17.65■□□□□ 0.42
NR1H3-235ENST00000616973 KCNJ12Q14500 433 aa17.65■□□□□ 0.42
NR1H3-235ENST00000616973 KIF18AQ8NI77 898 aa17.65■□□□□ 0.42
NR1H3-235ENST00000616973 NOC3LQ8WTT2 800 aaKnown RBP17.65■□□□□ 0.42
NR1H3-235ENST00000616973 PNMA5Q96PV4 448 aa17.65■□□□□ 0.42
NR1H3-235ENST00000616973 THAP9Q9H5L6 903 aa17.65■□□□□ 0.42
NR1H3-235ENST00000616973 BLOC1S4Q9NUP1 217 aa17.65■□□□□ 0.42
NR1H3-235ENST00000616973 DDX25Q9UHL0 483 aaKnown RBP17.65■□□□□ 0.42
NR1H3-235ENST00000616973 CYP3A7-CYP3A51PA0A087WV96 503 aa17.64■□□□□ 0.42
NR1H3-235ENST00000616973 AKR1B15C9JRZ8 316 aaPredicted RBP17.64■□□□□ 0.42
NR1H3-235ENST00000616973 SLC26A4O43511 780 aa17.64■□□□□ 0.42
NR1H3-235ENST00000616973 GH2P01242 217 aa17.64■□□□□ 0.42
NR1H3-235ENST00000616973 CYP3A7P24462 503 aa17.64■□□□□ 0.42
NR1H3-235ENST00000616973 BAG6P46379 1132 aa17.64■□□□□ 0.42
NR1H3-235ENST00000616973 COPB1P53618 953 aaKnown RBP17.64■□□□□ 0.42
NR1H3-235ENST00000616973 GOLGA8FQ08AF8 430 aa17.64■□□□□ 0.42
NR1H3-235ENST00000616973 GOLGA8DPQ0D2H9 430 aa17.64■□□□□ 0.42
NR1H3-235ENST00000616973 CNNM4Q6P4Q7 775 aa17.64■□□□□ 0.42
NR1H3-235ENST00000616973 MOXD1Q6UVY6 613 aa17.64■□□□□ 0.42
NR1H3-235ENST00000616973 SV2BQ7L1I2 683 aa17.64■□□□□ 0.42
NR1H3-235ENST00000616973 FAM151AQ8WW52 585 aa17.64■□□□□ 0.42
NR1H3-235ENST00000616973 AMNQ9BXJ7 453 aa17.64■□□□□ 0.42
NR1H3-235ENST00000616973 PSMD14O00487 310 aa17.64■□□□□ 0.41
NR1H3-235ENST00000616973 ZSCAN12O43309 604 aa17.64■□□□□ 0.41
NR1H3-235ENST00000616973 ADKP55263 362 aaKnown RBP17.64■□□□□ 0.41
NR1H3-235ENST00000616973 JAG1P78504 1218 aa17.64■□□□□ 0.41
NR1H3-235ENST00000616973 SYCP1Q15431 976 aa17.64■□□□□ 0.41
NR1H3-235ENST00000616973 FKBP1CQ5VVH2 108 aa17.64■□□□□ 0.41
NR1H3-235ENST00000616973 KRT79Q5XKE5 535 aa17.64■□□□□ 0.41
NR1H3-235ENST00000616973 PPFIBP1Q86W92 1011 aa17.64■□□□□ 0.41
NR1H3-235ENST00000616973 LARGE2Q8N3Y3 721 aa17.64■□□□□ 0.41
NR1H3-235ENST00000616973 HAS1Q92839 578 aa17.64■□□□□ 0.41
NR1H3-235ENST00000616973 MBOAT7Q96N66 472 aa17.64■□□□□ 0.41
NR1H3-235ENST00000616973 NAA15Q9BXJ9 866 aaKnown RBP17.64■□□□□ 0.41
NR1H3-235ENST00000616973 LRRC27Q9C0I9 530 aa17.64■□□□□ 0.41
NR1H3-235ENST00000616973 PDGFDQ9GZP0 370 aaPredicted RBP17.64■□□□□ 0.41
NR1H3-235ENST00000616973 EXOC1Q9NV70 894 aa17.64■□□□□ 0.41
NR1H3-235ENST00000616973 ZNF70Q9UC06 446 aaPredicted RBP17.64■□□□□ 0.41
NR1H3-235ENST00000616973 PVALEFA0A1B0GWK0 134 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 N4BP3O15049 544 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 BMP3P12645 472 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 EEF1GP26641 437 aaKnown RBP17.63■□□□□ 0.41
NR1H3-235ENST00000616973 MMP14P50281 582 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 ASIC1P78348 528 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 PDE4DQ08499 809 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 RRP1BQ14684 758 aaKnown RBP17.63■□□□□ 0.41
NR1H3-235ENST00000616973 DLGAP5Q15398 846 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 SPDYE2Q495Y8 402 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 TMEM119Q4V9L6 283 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 SYDE2Q5VT97 1194 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 IRF2BP1Q8IU81 584 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 TEX2Q8IWB9 1127 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 MTMR14Q8NCE2 650 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 CCDC51Q96ER9 411 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 CDK5RAP3Q96JB5 506 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 ANO3Q9BYT9 981 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.63■□□□□ 0.41
NR1H3-235ENST00000616973 MAPK8IP1Q9UQF2 711 aa17.63■□□□□ 0.41
NR1H3-235ENST00000616973 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.63■□□□□ 0.41
NR1H3-235ENST00000616973 BICDL2A1A5D9 508 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 RAD21O60216 631 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 DPEP1P16444 411 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms