RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 SH2D4AQ9H788 454 aa18.85■□□□□ 0.61
TNIP1-220ENST00000610535 DCP1AQ9NPI6 582 aaPredicted RBP18.85■□□□□ 0.61
TNIP1-220ENST00000610535 KCNQ2O43526 872 aa18.85■□□□□ 0.61
TNIP1-220ENST00000610535 USO1O60763 962 aaKnown RBP18.85■□□□□ 0.61
TNIP1-220ENST00000610535 EIF4A3P38919 411 aaKnown RBP18.85■□□□□ 0.61
TNIP1-220ENST00000610535 KAT2BQ92831 832 aa18.85■□□□□ 0.61
TNIP1-220ENST00000610535 CCSER1Q9C0I3 900 aa18.85■□□□□ 0.61
TNIP1-220ENST00000610535 SALL4Q9UJQ4 1053 aa18.85■□□□□ 0.61
TNIP1-220ENST00000610535 ORC4O43929 436 aa18.84■□□□□ 0.61
TNIP1-220ENST00000610535 CPP00450 1065 aa18.84■□□□□ 0.61
TNIP1-220ENST00000610535 ASIC1P78348 528 aa18.84■□□□□ 0.61
TNIP1-220ENST00000610535 ERGIC2Q96RQ1 377 aa18.84■□□□□ 0.61
TNIP1-220ENST00000610535 TSGA10Q9BZW7 698 aa18.84■□□□□ 0.61
TNIP1-220ENST00000610535 TRIM9Q9C026 710 aa18.84■□□□□ 0.61
TNIP1-220ENST00000610535 M0R2N6 131 aa18.84■□□□□ 0.61
TNIP1-220ENST00000610535 EIF3HO15372 352 aaKnown RBP eCLIP18.84■□□□□ 0.61
TNIP1-220ENST00000610535 PCP11498 1178 aaKnown RBP18.84■□□□□ 0.61
TNIP1-220ENST00000610535 ATP6V1AP38606 617 aa18.84■□□□□ 0.61
TNIP1-220ENST00000610535 KIF11P52732 1056 aa18.84■□□□□ 0.61
TNIP1-220ENST00000610535 TXNRD1Q16881 649 aa18.84■□□□□ 0.61
TNIP1-220ENST00000610535 TTMPQ5BVD1 217 aa18.84■□□□□ 0.61
TNIP1-220ENST00000610535 SH3GL2Q99962 352 aa18.84■□□□□ 0.61
TNIP1-220ENST00000610535 PLAGL2Q9UPG8 496 aa18.84■□□□□ 0.61
TNIP1-220ENST00000610535 COL4A1P02462 1669 aa18.84■□□□□ 0.61
TNIP1-220ENST00000610535 KIF5BP33176 963 aa18.83■□□□□ 0.61
TNIP1-220ENST00000610535 CDK17Q00537 523 aa18.83■□□□□ 0.61
TNIP1-220ENST00000610535 SLC35G1Q2M3R5 365 aa18.83■□□□□ 0.61
TNIP1-220ENST00000610535 FAM182BQ5T319 152 aa18.83■□□□□ 0.61
TNIP1-220ENST00000610535 HAUS3Q68CZ6 603 aa18.83■□□□□ 0.61
TNIP1-220ENST00000610535 ZSCAN29Q8IWY8 852 aaPredicted RBP18.83■□□□□ 0.61
TNIP1-220ENST00000610535 ERLIN2O94905 339 aa18.83■□□□□ 0.6
TNIP1-220ENST00000610535 ATP2B2Q01814 1243 aa18.83■□□□□ 0.6
TNIP1-220ENST00000610535 DDB1Q16531 1140 aa18.83■□□□□ 0.6
TNIP1-220ENST00000610535 CCDC181Q5TID7 509 aa18.83■□□□□ 0.6
TNIP1-220ENST00000610535 KCTD16Q68DU8 428 aa18.83■□□□□ 0.6
TNIP1-220ENST00000610535 CABP7Q86V35 215 aa18.83■□□□□ 0.6
TNIP1-220ENST00000610535 MS4A14Q96JA4 679 aa18.83■□□□□ 0.6
TNIP1-220ENST00000610535 SEMA6BQ9H3T3 888 aa18.83■□□□□ 0.6
TNIP1-220ENST00000610535 DEF6Q9H4E7 631 aa18.83■□□□□ 0.6
TNIP1-220ENST00000610535 MMRN2Q9H8L6 949 aa18.83■□□□□ 0.6
TNIP1-220ENST00000610535 SLC39A2Q9NP94 309 aa18.83■□□□□ 0.6
TNIP1-220ENST00000610535 NIP7Q9Y221 180 aaKnown RBP eCLIP18.83■□□□□ 0.6
TNIP1-220ENST00000610535 BCL9O00512 1426 aa18.83■□□□□ 0.6
TNIP1-220ENST00000610535 CACNA1SQ13698 1873 aa18.83■□□□□ 0.6
TNIP1-220ENST00000610535 BICDL2A1A5D9 508 aa18.82■□□□□ 0.6
TNIP1-220ENST00000610535 AKR1B10O60218 316 aa18.82■□□□□ 0.6
TNIP1-220ENST00000610535 MYL1P05976 194 aa18.82■□□□□ 0.6
TNIP1-220ENST00000610535 MECOMQ03112 1051 aa18.82■□□□□ 0.6
TNIP1-220ENST00000610535 HEATR3Q7Z4Q2 680 aa18.82■□□□□ 0.6
TNIP1-220ENST00000610535 SH2D3CQ8N5H7 860 aa18.82■□□□□ 0.6
TNIP1-220ENST00000610535 FAM84BQ96KN1 310 aaPredicted RBP18.82■□□□□ 0.6
TNIP1-220ENST00000610535 FLT1P17948 1338 aa18.82■□□□□ 0.6
TNIP1-220ENST00000610535 A0A1W2PQJ5 194 aa18.82■□□□□ 0.6
TNIP1-220ENST00000610535 GOLGA8KD6RF30 607 aa18.82■□□□□ 0.6
TNIP1-220ENST00000610535 GUCY2CP25092 1073 aa18.82■□□□□ 0.6
TNIP1-220ENST00000610535 FAM114A1Q8IWE2 563 aa18.82■□□□□ 0.6
TNIP1-220ENST00000610535 IL17RBQ9NRM6 502 aa18.82■□□□□ 0.6
TNIP1-220ENST00000610535 RBM12Q9NTZ6 932 aaKnown RBP18.82■□□□□ 0.6
TNIP1-220ENST00000610535 STIM2Q9P246 746 aa18.82■□□□□ 0.6
TNIP1-220ENST00000610535 EP400Q96L91 3159 aa18.82■□□□□ 0.6
TNIP1-220ENST00000610535 OPA1O60313 960 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 TFAP4Q01664 338 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 PDCLQ13371 301 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 FIGNQ5HY92 759 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 KIAA0895Q8NCT3 520 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 NSUN4Q96CB9 384 aaKnown RBP18.81■□□□□ 0.6
TNIP1-220ENST00000610535 NHSL1Q5SYE7 1610 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 BUB1O43683 1085 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 NTSR2O95665 410 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 KRT14P02533 472 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 PRLRP16471 622 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 KLRK1P26718 216 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 ATP1A2P50993 1020 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 EPHB4P54760 987 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 CAVIN4Q5BKX8 364 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 FBXW10Q5XX13 1052 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 RRAGAQ7L523 313 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 ZNF572Q7Z3I7 529 aaPredicted RBP18.81■□□□□ 0.6
TNIP1-220ENST00000610535 PNMA1Q8ND90 353 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 SIK3Q9Y2K2 1263 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 HYOU1Q9Y4L1 999 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 ITGB4P16144 1822 aa18.81■□□□□ 0.6
TNIP1-220ENST00000610535 SHTN1A0MZ66 631 aa18.8■□□□□ 0.6
TNIP1-220ENST00000610535 CYTH3O43739 400 aa18.8■□□□□ 0.6
TNIP1-220ENST00000610535 ZPR1O75312 459 aa18.8■□□□□ 0.6
TNIP1-220ENST00000610535 ITIH3Q06033 890 aa18.8■□□□□ 0.6
TNIP1-220ENST00000610535 INTS5Q6P9B9 1019 aaKnown RBP18.8■□□□□ 0.6
TNIP1-220ENST00000610535 C3orf67Q6ZVT6 689 aa18.8■□□□□ 0.6
TNIP1-220ENST00000610535 FAM107BQ9H098 131 aa18.8■□□□□ 0.6
TNIP1-220ENST00000610535 CPVLQ9H3G5 476 aa18.8■□□□□ 0.6
TNIP1-220ENST00000610535 SH3GLB2Q9NR46 395 aa18.8■□□□□ 0.6
TNIP1-220ENST00000610535 TCP11L1Q9NUJ3 509 aa18.8■□□□□ 0.6
TNIP1-220ENST00000610535 JAG2Q9Y219 1238 aa18.8■□□□□ 0.6
TNIP1-220ENST00000610535 ZSCAN5CA6NGD5 496 aaPredicted RBP18.8■□□□□ 0.6
TNIP1-220ENST00000610535 LRRC53A6NM62 1247 aa18.8■□□□□ 0.6
TNIP1-220ENST00000610535 USP17L8P0C7I0 530 aa18.8■□□□□ 0.6
TNIP1-220ENST00000610535 TCP1P17987 556 aaKnown RBP18.8■□□□□ 0.6
TNIP1-220ENST00000610535 HNRNPH3P31942 346 aaKnown RBP18.8■□□□□ 0.6
TNIP1-220ENST00000610535 MAGEA1P43355 309 aa18.8■□□□□ 0.6
TNIP1-220ENST00000610535 DNA2P51530 1060 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms