RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 RPS6P62753 249 aaKnown RBP19.56■□□□□ 0.72
VAT1-204ENST00000587147 CNTN2Q02246 1040 aa19.56■□□□□ 0.72
VAT1-204ENST00000587147 HOMER1Q86YM7 354 aa19.56■□□□□ 0.72
VAT1-204ENST00000587147 ZNF713Q8N859 430 aaPredicted RBP19.56■□□□□ 0.72
VAT1-204ENST00000587147 ZNF274Q96GC6 653 aaPredicted RBP19.56■□□□□ 0.72
VAT1-204ENST00000587147 RBM27Q9P2N5 1060 aaKnown RBP19.56■□□□□ 0.72
VAT1-204ENST00000587147 DDX20Q9UHI6 824 aaKnown RBP19.56■□□□□ 0.72
VAT1-204ENST00000587147 SOWAHBA6NEL2 793 aa19.55■□□□□ 0.72
VAT1-204ENST00000587147 MYCP01106 439 aaPredicted RBP19.55■□□□□ 0.72
VAT1-204ENST00000587147 RXRAP19793 462 aa19.55■□□□□ 0.72
VAT1-204ENST00000587147 HSD17B4P51659 736 aa19.55■□□□□ 0.72
VAT1-204ENST00000587147 APOBRQ0VD83 1088 aa19.55■□□□□ 0.72
VAT1-204ENST00000587147 ANKRD1Q15327 319 aa19.55■□□□□ 0.72
VAT1-204ENST00000587147 LHX8Q68G74 356 aa19.55■□□□□ 0.72
VAT1-204ENST00000587147 ARMCX2Q7L311 632 aa19.55■□□□□ 0.72
VAT1-204ENST00000587147 TRPV1Q8NER1 839 aa19.55■□□□□ 0.72
VAT1-204ENST00000587147 SHISA4Q96DD7 197 aa19.55■□□□□ 0.72
VAT1-204ENST00000587147 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.55■□□□□ 0.72
VAT1-204ENST00000587147 SEC24BO95487 1268 aa19.54■□□□□ 0.72
VAT1-204ENST00000587147 SNAI1O95863 264 aaPredicted RBP19.54■□□□□ 0.72
VAT1-204ENST00000587147 ZNF865P0CJ78 1059 aaPredicted RBP19.54■□□□□ 0.72
VAT1-204ENST00000587147 AKR1A1P14550 325 aa19.54■□□□□ 0.72
VAT1-204ENST00000587147 EN2P19622 333 aaPredicted RBP19.54■□□□□ 0.72
VAT1-204ENST00000587147 ALDH5A1P51649 535 aaPredicted RBP19.54■□□□□ 0.72
VAT1-204ENST00000587147 FUT2Q10981 343 aa19.54■□□□□ 0.72
VAT1-204ENST00000587147 TOB2Q14106 344 aaPredicted RBP19.54■□□□□ 0.72
VAT1-204ENST00000587147 SLC30A10Q6XR72 485 aa19.54■□□□□ 0.72
VAT1-204ENST00000587147 CCDC144CPQ8IYA2 1237 aa19.54■□□□□ 0.72
VAT1-204ENST00000587147 PDRG1Q9NUG6 133 aa19.54■□□□□ 0.72
VAT1-204ENST00000587147 GTF3C3Q9Y5Q9 886 aa19.54■□□□□ 0.72
VAT1-204ENST00000587147 LRRC37A2A6NM11 1700 aa19.54■□□□□ 0.72
VAT1-204ENST00000587147 CNTNAP5Q8WYK1 1306 aa19.53■□□□□ 0.72
VAT1-204ENST00000587147 TFRCP02786 760 aaKnown RBP19.53■□□□□ 0.72
VAT1-204ENST00000587147 EDNRBP24530 442 aa19.53■□□□□ 0.72
VAT1-204ENST00000587147 CALML3P27482 149 aa19.53■□□□□ 0.72
VAT1-204ENST00000587147 ACVR2BQ13705 512 aa19.53■□□□□ 0.72
VAT1-204ENST00000587147 UBE2Q1Q7Z7E8 422 aa19.53■□□□□ 0.72
VAT1-204ENST00000587147 IWS1Q96ST2 819 aa19.53■□□□□ 0.72
VAT1-204ENST00000587147 UPF3BQ9BZI7 483 aaKnown RBP19.53■□□□□ 0.72
VAT1-204ENST00000587147 VTA1Q9NP79 307 aa19.53■□□□□ 0.72
VAT1-204ENST00000587147 FAM217BQ9NTX9 383 aaPredicted RBP19.53■□□□□ 0.72
VAT1-204ENST00000587147 ASTN1O14525 1302 aa19.52■□□□□ 0.72
VAT1-204ENST00000587147 MCM3APO60318 1980 aa19.52■□□□□ 0.72
VAT1-204ENST00000587147 PIK3CDO00329 1044 aa19.52■□□□□ 0.72
VAT1-204ENST00000587147 OPLAHO14841 1288 aa19.52■□□□□ 0.72
VAT1-204ENST00000587147 TAL1P17542 331 aaPredicted RBP19.52■□□□□ 0.72
VAT1-204ENST00000587147 CNGA1P29973 690 aa19.52■□□□□ 0.72
VAT1-204ENST00000587147 PDIA3P30101 505 aaKnown RBP19.52■□□□□ 0.72
VAT1-204ENST00000587147 MLLT1Q03111 559 aaPredicted RBP19.52■□□□□ 0.72
VAT1-204ENST00000587147 PPP1R18Q6NYC8 613 aa19.52■□□□□ 0.72
VAT1-204ENST00000587147 SYTL5Q8TDW5 730 aaPredicted RBP19.52■□□□□ 0.72
VAT1-204ENST00000587147 NSUN6Q8TEA1 469 aaKnown RBP19.52■□□□□ 0.72
VAT1-204ENST00000587147 KATNBL1Q9H079 304 aa19.52■□□□□ 0.72
VAT1-204ENST00000587147 FAM184BQ9ULE4 1060 aa19.52■□□□□ 0.72
VAT1-204ENST00000587147 GCOM1H8Y6P7 765 aaPredicted RBP19.51■□□□□ 0.71
VAT1-204ENST00000587147 POLR2MP0CAP2 368 aa19.51■□□□□ 0.71
VAT1-204ENST00000587147 GLT8D2Q9H1C3 349 aa19.51■□□□□ 0.71
VAT1-204ENST00000587147 UPF2Q9HAU5 1272 aaKnown RBP19.51■□□□□ 0.71
VAT1-204ENST00000587147 FARP2O94887 1054 aaPredicted RBP19.5■□□□□ 0.71
VAT1-204ENST00000587147 CFBP00751 764 aa19.5■□□□□ 0.71
VAT1-204ENST00000587147 RARBP10826 455 aa19.5■□□□□ 0.71
VAT1-204ENST00000587147 IFNAR1P17181 557 aa19.5■□□□□ 0.71
VAT1-204ENST00000587147 CDC27P30260 824 aa19.5■□□□□ 0.71
VAT1-204ENST00000587147 RBM25P49756 843 aaKnown RBP19.5■□□□□ 0.71
VAT1-204ENST00000587147 RAB11FIP4Q86YS3 637 aa19.5■□□□□ 0.71
VAT1-204ENST00000587147 ARRDC4Q8NCT1 418 aa19.5■□□□□ 0.71
VAT1-204ENST00000587147 NAP1L2Q9ULW6 460 aaPredicted RBP19.5■□□□□ 0.71
VAT1-204ENST00000587147 DUSP11O75319 330 aaKnown RBP19.49■□□□□ 0.71
VAT1-204ENST00000587147 ADD1P35611 737 aaKnown RBP19.49■□□□□ 0.71
VAT1-204ENST00000587147 PRAMEF19Q5SWL8 479 aa19.49■□□□□ 0.71
VAT1-204ENST00000587147 FAM177A1Q8N128 213 aaPredicted RBP19.49■□□□□ 0.71
VAT1-204ENST00000587147 CMTR1Q8N1G2 835 aaKnown RBP19.49■□□□□ 0.71
VAT1-204ENST00000587147 RMDN3Q96TC7 470 aa19.49■□□□□ 0.71
VAT1-204ENST00000587147 RNF26Q9BY78 433 aaPredicted RBP19.49■□□□□ 0.71
VAT1-204ENST00000587147 ZHX1Q9UKY1 873 aaPredicted RBP19.49■□□□□ 0.71
VAT1-204ENST00000587147 DNM1LO00429 736 aa19.48■□□□□ 0.71
VAT1-204ENST00000587147 PRPF3O43395 683 aaKnown RBP19.48■□□□□ 0.71
VAT1-204ENST00000587147 NKX3-2P78367 333 aa19.48■□□□□ 0.71
VAT1-204ENST00000587147 PDE4DQ08499 809 aa19.48■□□□□ 0.71
VAT1-204ENST00000587147 NTRK3Q16288 839 aa19.48■□□□□ 0.71
VAT1-204ENST00000587147 CCDC144BQ3MJ40 725 aa19.48■□□□□ 0.71
VAT1-204ENST00000587147 IQSEC1Q6DN90 963 aa19.48■□□□□ 0.71
VAT1-204ENST00000587147 CPLX2Q6PUV4 134 aaKnown RBP19.48■□□□□ 0.71
VAT1-204ENST00000587147 NECAB2Q7Z6G3 386 aa19.48■□□□□ 0.71
VAT1-204ENST00000587147 TBC1D5Q92609 795 aa19.48■□□□□ 0.71
VAT1-204ENST00000587147 CUL5Q93034 780 aa19.48■□□□□ 0.71
VAT1-204ENST00000587147 C22orf23Q9BZE7 217 aa19.48■□□□□ 0.71
VAT1-204ENST00000587147 Q9Y3F1 56 aa19.48■□□□□ 0.71
VAT1-204ENST00000587147 FRMPD4Q14CM0 1322 aa19.48■□□□□ 0.71
VAT1-204ENST00000587147 RBM47A0AV96 593 aaKnown RBP19.47■□□□□ 0.71
VAT1-204ENST00000587147 PFKFB3Q16875 520 aaPredicted RBP19.47■□□□□ 0.71
VAT1-204ENST00000587147 CCDC82Q8N4S0 544 aa19.47■□□□□ 0.71
VAT1-204ENST00000587147 CCDC12Q8WUD4 166 aaPredicted RBP19.47■□□□□ 0.71
VAT1-204ENST00000587147 PXMP2Q9NR77 195 aa19.47■□□□□ 0.71
VAT1-204ENST00000587147 BARHL2Q9NY43 387 aa19.47■□□□□ 0.71
VAT1-204ENST00000587147 COL20A1Q9P218 1284 aa19.47■□□□□ 0.71
VAT1-204ENST00000587147 V9GY48 417 aaPredicted RBP19.47■□□□□ 0.71
VAT1-204ENST00000587147 NKRFO15226 690 aaKnown RBP eCLIP19.46■□□□□ 0.71
VAT1-204ENST00000587147 STAM2O75886 525 aa19.46■□□□□ 0.71
VAT1-204ENST00000587147 CDKL5O76039 1030 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms