RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 PALM3A6NDB9 673 aaPredicted RBP25.01■■□□□ 1.59
PPP4R1-228ENST00000584074 ASGR1P07306 291 aa25.01■■□□□ 1.59
PPP4R1-228ENST00000584074 BEX3Q00994 111 aa25.01■■□□□ 1.59
PPP4R1-228ENST00000584074 WTAPQ15007 396 aa25.01■■□□□ 1.59
PPP4R1-228ENST00000584074 IQSEC1Q6DN90 963 aa25.01■■□□□ 1.59
PPP4R1-228ENST00000584074 MB21D2Q8IYB1 491 aaPredicted RBP25.01■■□□□ 1.59
PPP4R1-228ENST00000584074 PCSK9Q8NBP7 692 aaKnown RBP25.01■■□□□ 1.59
PPP4R1-228ENST00000584074 RGS22Q8NE09 1264 aa25.01■■□□□ 1.59
PPP4R1-228ENST00000584074 TBC1D5Q92609 795 aa25.01■■□□□ 1.59
PPP4R1-228ENST00000584074 ABCB11O95342 1321 aa25.01■■□□□ 1.59
PPP4R1-228ENST00000584074 LRRC37A2A6NM11 1700 aa25■■□□□ 1.59
PPP4R1-228ENST00000584074 LOC102724159A0A0B4J2E5 919 aa25■■□□□ 1.59
PPP4R1-228ENST00000584074 SOX1O00570 391 aaPredicted RBP25■■□□□ 1.59
PPP4R1-228ENST00000584074 PQBP1O60828 265 aaKnown RBP25■■□□□ 1.59
PPP4R1-228ENST00000584074 NKX3-2P78367 333 aa25■■□□□ 1.59
PPP4R1-228ENST00000584074 SART3Q15020 963 aaKnown RBP25■■□□□ 1.59
PPP4R1-228ENST00000584074 PWP2Q15269 919 aaKnown RBP25■■□□□ 1.59
PPP4R1-228ENST00000584074 TMEM67Q5HYA8 995 aa25■■□□□ 1.59
PPP4R1-228ENST00000584074 TLK2Q86UE8 772 aa25■■□□□ 1.59
PPP4R1-228ENST00000584074 FBXO11Q86XK2 927 aa25■■□□□ 1.59
PPP4R1-228ENST00000584074 TDHQ8IZJ6 230 aa25■■□□□ 1.59
PPP4R1-228ENST00000584074 TRIM43BA6NCK2 446 aa24.99■■□□□ 1.59
PPP4R1-228ENST00000584074 DYNC1LI2O43237 492 aaPredicted RBP24.99■■□□□ 1.59
PPP4R1-228ENST00000584074 GRM4Q14833 912 aa24.99■■□□□ 1.59
PPP4R1-228ENST00000584074 IGDCC4Q8TDY8 1250 aa24.99■■□□□ 1.59
PPP4R1-228ENST00000584074 TRIM43Q96BQ3 446 aaPredicted RBP24.99■■□□□ 1.59
PPP4R1-228ENST00000584074 GLT1D1Q96MS3 346 aa24.99■■□□□ 1.59
PPP4R1-228ENST00000584074 AP5M1Q9H0R1 490 aa24.99■■□□□ 1.59
PPP4R1-228ENST00000584074 ANO2Q9NQ90 1003 aa24.99■■□□□ 1.59
PPP4R1-228ENST00000584074 SLC27A2O14975 620 aa24.98■■□□□ 1.59
PPP4R1-228ENST00000584074 PDE4DQ08499 809 aa24.98■■□□□ 1.59
PPP4R1-228ENST00000584074 TROAPQ12815 778 aa24.98■■□□□ 1.59
PPP4R1-228ENST00000584074 SLC35G1Q2M3R5 365 aa24.98■■□□□ 1.59
PPP4R1-228ENST00000584074 DNERQ8NFT8 737 aa24.98■■□□□ 1.59
PPP4R1-228ENST00000584074 VTI1AQ96AJ9 217 aa24.98■■□□□ 1.59
PPP4R1-228ENST00000584074 MTMR8Q96EF0 704 aa24.98■■□□□ 1.59
PPP4R1-228ENST00000584074 CCDC136Q96JN2 1154 aa24.98■■□□□ 1.59
PPP4R1-228ENST00000584074 GPHNQ9NQX3 736 aaPredicted RBP24.98■■□□□ 1.59
PPP4R1-228ENST00000584074 ELP1O95163 1332 aa24.97■■□□□ 1.59
PPP4R1-228ENST00000584074 PPP1R11O60927 126 aaPredicted RBP24.97■■□□□ 1.59
PPP4R1-228ENST00000584074 CLTBP09497 229 aa24.97■■□□□ 1.59
PPP4R1-228ENST00000584074 EDNRBP24530 442 aa24.97■■□□□ 1.59
PPP4R1-228ENST00000584074 COL9A3Q14050 684 aaPredicted RBP24.97■■□□□ 1.59
PPP4R1-228ENST00000584074 FSCN1Q16658 493 aaKnown RBP24.97■■□□□ 1.59
PPP4R1-228ENST00000584074 CREB3L3Q68CJ9 461 aa24.97■■□□□ 1.59
PPP4R1-228ENST00000584074 ANKRD33Q7Z3H0 272 aa24.97■■□□□ 1.59
PPP4R1-228ENST00000584074 LRCH3Q96II8 777 aa24.97■■□□□ 1.59
PPP4R1-228ENST00000584074 COL20A1Q9P218 1284 aa24.97■■□□□ 1.59
PPP4R1-228ENST00000584074 MRPL11Q9Y3B7 192 aaKnown RBP24.97■■□□□ 1.59
PPP4R1-228ENST00000584074 NECTIN1Q15223 517 aa24.96■■□□□ 1.59
PPP4R1-228ENST00000584074 DUSP28Q4G0W2 176 aa24.96■■□□□ 1.59
PPP4R1-228ENST00000584074 CATIPQ7Z7H3 387 aa24.96■■□□□ 1.59
PPP4R1-228ENST00000584074 MCF2L2Q86YR7 1114 aa24.96■■□□□ 1.59
PPP4R1-228ENST00000584074 SYTL5Q8TDW5 730 aaPredicted RBP24.96■■□□□ 1.59
PPP4R1-228ENST00000584074 BADQ92934 168 aa24.96■■□□□ 1.59
PPP4R1-228ENST00000584074 MPHOSPH6Q99547 160 aaKnown RBP24.96■■□□□ 1.59
PPP4R1-228ENST00000584074 AMNQ9BXJ7 453 aa24.96■■□□□ 1.59
PPP4R1-228ENST00000584074 WDR11Q9BZH6 1224 aa24.96■■□□□ 1.59
PPP4R1-228ENST00000584074 RBM47A0AV96 593 aaKnown RBP24.95■■□□□ 1.58
PPP4R1-228ENST00000584074 ZBTB5O15062 677 aa24.95■■□□□ 1.58
PPP4R1-228ENST00000584074 PRC1O43663 620 aa24.95■■□□□ 1.58
PPP4R1-228ENST00000584074 ITGB8P26012 769 aa24.95■■□□□ 1.58
PPP4R1-228ENST00000584074 FAAP100Q0VG06 881 aa24.95■■□□□ 1.58
PPP4R1-228ENST00000584074 CXCL17Q6UXB2 119 aa24.95■■□□□ 1.58
PPP4R1-228ENST00000584074 HOMER1Q86YM7 354 aa24.95■■□□□ 1.58
PPP4R1-228ENST00000584074 TOX2Q96NM4 488 aa24.95■■□□□ 1.58
PPP4R1-228ENST00000584074 TAAR1Q96RJ0 339 aa24.95■■□□□ 1.58
PPP4R1-228ENST00000584074 MAF1Q9H063 256 aa24.95■■□□□ 1.58
PPP4R1-228ENST00000584074 LY9Q9HBG7 655 aa24.95■■□□□ 1.58
PPP4R1-228ENST00000584074 Q9Y3F1 56 aa24.95■■□□□ 1.58
PPP4R1-228ENST00000584074 LAMA2P24043 3122 aaKnown RBP24.94■■□□□ 1.58
PPP4R1-228ENST00000584074 DCDC2CA8MYV0 355 aa24.94■■□□□ 1.58
PPP4R1-228ENST00000584074 OPLAHO14841 1288 aa24.94■■□□□ 1.58
PPP4R1-228ENST00000584074 CDK7P50613 346 aa24.94■■□□□ 1.58
PPP4R1-228ENST00000584074 CASC1Q6TDU7 716 aa24.94■■□□□ 1.58
PPP4R1-228ENST00000584074 PIGSQ96S52 555 aa24.94■■□□□ 1.58
PPP4R1-228ENST00000584074 RIOX1Q9H6W3 641 aa24.94■■□□□ 1.58
PPP4R1-228ENST00000584074 TMEM39AQ9NV64 488 aa24.94■■□□□ 1.58
PPP4R1-228ENST00000584074 B4DLN1 442 aa24.93■■□□□ 1.58
PPP4R1-228ENST00000584074 KIAA0355O15063 1070 aa24.93■■□□□ 1.58
PPP4R1-228ENST00000584074 CYTH3O43739 400 aa24.93■■□□□ 1.58
PPP4R1-228ENST00000584074 MCM5P33992 734 aa24.93■■□□□ 1.58
PPP4R1-228ENST00000584074 MRPL12P52815 198 aaKnown RBP24.93■■□□□ 1.58
PPP4R1-228ENST00000584074 LRIT3Q3SXY7 679 aa24.93■■□□□ 1.58
PPP4R1-228ENST00000584074 MYL10Q9BUA6 226 aa24.93■■□□□ 1.58
PPP4R1-228ENST00000584074 PCDHA1Q9Y5I3 950 aa24.93■■□□□ 1.58
PPP4R1-228ENST00000584074 LTBP2Q14767 1821 aa24.93■■□□□ 1.58
PPP4R1-228ENST00000584074 A0A0U1RQG5 324 aaPredicted RBP24.92■■□□□ 1.58
PPP4R1-228ENST00000584074 ARVCFO00192 962 aa24.92■■□□□ 1.58
PPP4R1-228ENST00000584074 CFBP00751 764 aa24.92■■□□□ 1.58
PPP4R1-228ENST00000584074 ZNF654Q8IZM8 581 aa24.92■■□□□ 1.58
PPP4R1-228ENST00000584074 NSUN6Q8TEA1 469 aaKnown RBP24.92■■□□□ 1.58
PPP4R1-228ENST00000584074 RMDN3Q96TC7 470 aa24.92■■□□□ 1.58
PPP4R1-228ENST00000584074 CDC45O75419 566 aa24.91■■□□□ 1.58
PPP4R1-228ENST00000584074 RAG1P15918 1043 aa24.91■■□□□ 1.58
PPP4R1-228ENST00000584074 SCFD2Q8WU76 684 aa24.91■■□□□ 1.58
PPP4R1-228ENST00000584074 MTA3Q9BTC8 594 aa24.91■■□□□ 1.58
PPP4R1-228ENST00000584074 MROH7Q68CQ1 1323 aa24.9■■□□□ 1.58
PPP4R1-228ENST00000584074 SH2B2O14492 632 aaPredicted RBP24.9■■□□□ 1.58
PPP4R1-228ENST00000584074 ZEB2O60315 1214 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms