RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 MAP4K1Q92918 833 aa13.9□□□□□ -0.18
LITAF-219ENST00000576334 VTI1AQ96AJ9 217 aa13.9□□□□□ -0.18
LITAF-219ENST00000576334 TSEN34Q9BSV6 310 aaKnown RBP13.9□□□□□ -0.18
LITAF-219ENST00000576334 COL20A1Q9P218 1284 aa13.9□□□□□ -0.18
LITAF-219ENST00000576334 PRKAG2Q9UGJ0 569 aa13.9□□□□□ -0.18
LITAF-219ENST00000576334 MAD2L2Q9UI95 211 aa13.9□□□□□ -0.18
LITAF-219ENST00000576334 RBM8AQ9Y5S9 174 aaKnown RBP13.9□□□□□ -0.18
LITAF-219ENST00000576334 U3KPZ7 1027 aaPredicted RBP13.9□□□□□ -0.18
LITAF-219ENST00000576334 WDR19Q8NEZ3 1342 aa13.9□□□□□ -0.19
LITAF-219ENST00000576334 MOXD2PA6NHM9 499 aa13.89□□□□□ -0.19
LITAF-219ENST00000576334 RBAK-RBAKDNI3L0D1 243 aa13.89□□□□□ -0.19
LITAF-219ENST00000576334 IFIT3O14879 490 aaKnown RBP13.89□□□□□ -0.19
LITAF-219ENST00000576334 PPP1R11O60927 126 aaPredicted RBP13.89□□□□□ -0.19
LITAF-219ENST00000576334 CLTBP09497 229 aa13.89□□□□□ -0.19
LITAF-219ENST00000576334 CST5P28325 142 aaPredicted RBP13.89□□□□□ -0.19
LITAF-219ENST00000576334 PSMC6P62333 389 aa13.89□□□□□ -0.19
LITAF-219ENST00000576334 SHHQ15465 462 aa13.89□□□□□ -0.19
LITAF-219ENST00000576334 ASPRV1Q53RT3 343 aa13.89□□□□□ -0.19
LITAF-219ENST00000576334 CCDC178Q5BJE1 867 aa13.89□□□□□ -0.19
LITAF-219ENST00000576334 CXCL17Q6UXB2 119 aa13.89□□□□□ -0.19
LITAF-219ENST00000576334 COPS5Q92905 334 aa13.89□□□□□ -0.19
LITAF-219ENST00000576334 TAAR1Q96RJ0 339 aa13.89□□□□□ -0.19
LITAF-219ENST00000576334 GRIN2DO15399 1336 aa13.89□□□□□ -0.19
LITAF-219ENST00000576334 KLRF2D3W0D1 207 aa13.88□□□□□ -0.19
LITAF-219ENST00000576334 OPLAHO14841 1288 aa13.88□□□□□ -0.19
LITAF-219ENST00000576334 CDK7P50613 346 aa13.88□□□□□ -0.19
LITAF-219ENST00000576334 TRDNQ13061 729 aa13.88□□□□□ -0.19
LITAF-219ENST00000576334 FSCN1Q16658 493 aaKnown RBP13.88□□□□□ -0.19
LITAF-219ENST00000576334 NUP133Q8WUM0 1156 aa13.88□□□□□ -0.19
LITAF-219ENST00000576334 GLT1D1Q96MS3 346 aa13.88□□□□□ -0.19
LITAF-219ENST00000576334 MYL10Q9BUA6 226 aa13.88□□□□□ -0.19
LITAF-219ENST00000576334 LSG1Q9H089 658 aaKnown RBP13.88□□□□□ -0.19
LITAF-219ENST00000576334 SPC25Q9HBM1 224 aa13.88□□□□□ -0.19
LITAF-219ENST00000576334 TMEM39AQ9NV64 488 aa13.88□□□□□ -0.19
LITAF-219ENST00000576334 EYSQ5T1H1 3165 aa13.87□□□□□ -0.19
LITAF-219ENST00000576334 PALM3A6NDB9 673 aaPredicted RBP13.87□□□□□ -0.19
LITAF-219ENST00000576334 ARIH2O95376 493 aa13.87□□□□□ -0.19
LITAF-219ENST00000576334 CENPBP07199 599 aaPredicted RBP13.87□□□□□ -0.19
LITAF-219ENST00000576334 LRIT3Q3SXY7 679 aa13.87□□□□□ -0.19
LITAF-219ENST00000576334 IQSEC1Q6DN90 963 aa13.87□□□□□ -0.19
LITAF-219ENST00000576334 ANKRD33Q7Z3H0 272 aa13.87□□□□□ -0.19
LITAF-219ENST00000576334 FBXO11Q86XK2 927 aa13.87□□□□□ -0.19
LITAF-219ENST00000576334 HOMER1Q86YM7 354 aa13.87□□□□□ -0.19
LITAF-219ENST00000576334 MB21D2Q8IYB1 491 aaPredicted RBP13.87□□□□□ -0.19
LITAF-219ENST00000576334 PCSK9Q8NBP7 692 aaKnown RBP13.87□□□□□ -0.19
LITAF-219ENST00000576334 NCOA7Q8NI08 942 aa13.87□□□□□ -0.19
LITAF-219ENST00000576334 PIBF1Q8WXW3 757 aa13.87□□□□□ -0.19
LITAF-219ENST00000576334 ESYT1Q9BSJ8 1104 aa13.87□□□□□ -0.19
LITAF-219ENST00000576334 WDR11Q9BZH6 1224 aa13.87□□□□□ -0.19
LITAF-219ENST00000576334 AP5M1Q9H0R1 490 aa13.87□□□□□ -0.19
LITAF-219ENST00000576334 VTA1Q9NP79 307 aa13.87□□□□□ -0.19
LITAF-219ENST00000576334 ADD3Q9UEY8 706 aaKnown RBP13.87□□□□□ -0.19
LITAF-219ENST00000576334 ARVCFO00192 962 aa13.86□□□□□ -0.19
LITAF-219ENST00000576334 KIAA0355O15063 1070 aa13.86□□□□□ -0.19
LITAF-219ENST00000576334 CYTH3O43739 400 aa13.86□□□□□ -0.19
LITAF-219ENST00000576334 EDNRBP24530 442 aa13.86□□□□□ -0.19
LITAF-219ENST00000576334 NKX3-2P78367 333 aa13.86□□□□□ -0.19
LITAF-219ENST00000576334 PDE4DQ08499 809 aa13.86□□□□□ -0.19
LITAF-219ENST00000576334 GRM4Q14833 912 aa13.86□□□□□ -0.19
LITAF-219ENST00000576334 WTAPQ15007 396 aa13.86□□□□□ -0.19
LITAF-219ENST00000576334 TMEM67Q5HYA8 995 aa13.86□□□□□ -0.19
LITAF-219ENST00000576334 RALYLQ86SE5 291 aaKnown RBP13.86□□□□□ -0.19
LITAF-219ENST00000576334 RAB11FIP4Q86YS3 637 aa13.86□□□□□ -0.19
LITAF-219ENST00000576334 SYTL5Q8TDW5 730 aaPredicted RBP13.86□□□□□ -0.19
LITAF-219ENST00000576334 IGDCC4Q8TDY8 1250 aa13.86□□□□□ -0.19
LITAF-219ENST00000576334 ZFP91Q96JP5 570 aaPredicted RBP13.86□□□□□ -0.19
LITAF-219ENST00000576334 PIGSQ96S52 555 aa13.86□□□□□ -0.19
LITAF-219ENST00000576334 LRRC2Q9BYS8 371 aa13.86□□□□□ -0.19
LITAF-219ENST00000576334 CDH23Q9H251 3354 aa13.86□□□□□ -0.19
LITAF-219ENST00000576334 ELP1O95163 1332 aa13.86□□□□□ -0.19
LITAF-219ENST00000576334 ABCB11O95342 1321 aa13.86□□□□□ -0.19
LITAF-219ENST00000576334 A0A0U1RQG5 324 aaPredicted RBP13.85□□□□□ -0.19
LITAF-219ENST00000576334 RBM47A0AV96 593 aaKnown RBP13.85□□□□□ -0.19
LITAF-219ENST00000576334 DCDC2CA8MYV0 355 aa13.85□□□□□ -0.19
LITAF-219ENST00000576334 SLC27A2O14975 620 aa13.85□□□□□ -0.19
LITAF-219ENST00000576334 CFBP00751 764 aa13.85□□□□□ -0.19
LITAF-219ENST00000576334 RAG1P15918 1043 aa13.85□□□□□ -0.19
LITAF-219ENST00000576334 NT5C2P49902 561 aa13.85□□□□□ -0.19
LITAF-219ENST00000576334 TROAPQ12815 778 aa13.85□□□□□ -0.19
LITAF-219ENST00000576334 DUSP28Q4G0W2 176 aa13.85□□□□□ -0.19
LITAF-219ENST00000576334 CENPQQ7L2Z9 268 aaPredicted RBP13.85□□□□□ -0.19
LITAF-219ENST00000576334 FAM126BQ8IXS8 530 aa13.85□□□□□ -0.19
LITAF-219ENST00000576334 MTMR8Q96EF0 704 aa13.85□□□□□ -0.19
LITAF-219ENST00000576334 TOX2Q96NM4 488 aa13.85□□□□□ -0.19
LITAF-219ENST00000576334 PPP1R12CQ9BZL4 782 aa13.85□□□□□ -0.19
LITAF-219ENST00000576334 TRPV6Q9H1D0 765 aa13.85□□□□□ -0.19
LITAF-219ENST00000576334 ANO2Q9NQ90 1003 aa13.85□□□□□ -0.19
LITAF-219ENST00000576334 TBX21Q9UL17 535 aa13.85□□□□□ -0.19
LITAF-219ENST00000576334 UMODL1Q5DID0 1318 aa13.85□□□□□ -0.19
LITAF-219ENST00000576334 EIF2AK2P19525 551 aaKnown RBP13.84□□□□□ -0.19
LITAF-219ENST00000576334 RXRAP19793 462 aa13.84□□□□□ -0.19
LITAF-219ENST00000576334 HOXA13P31271 388 aaPredicted RBP13.84□□□□□ -0.19
LITAF-219ENST00000576334 ITGA7Q13683 1181 aa13.84□□□□□ -0.19
LITAF-219ENST00000576334 LY6KQ17RY6 165 aa13.84□□□□□ -0.19
LITAF-219ENST00000576334 CREB3L3Q68CJ9 461 aa13.84□□□□□ -0.19
LITAF-219ENST00000576334 SEPT14Q6ZU15 432 aa13.84□□□□□ -0.19
LITAF-219ENST00000576334 DEFB123Q8N688 67 aa13.84□□□□□ -0.19
LITAF-219ENST00000576334 RGS22Q8NE09 1264 aa13.84□□□□□ -0.19
LITAF-219ENST00000576334 DNERQ8NFT8 737 aa13.84□□□□□ -0.19
LITAF-219ENST00000576334 OR6J1Q8NGC5 347 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms