RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 SLFN5Q08AF3 891 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 FAM209AQ5JX71 171 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 HEATR6Q6AI08 1181 aaKnown RBP8.86□□□□□ -0.99
CNOT1-222ENST00000570139 SULT6B1Q6IMI4 303 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 TXNDC11Q6PKC3 985 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 FCHSD1Q86WN1 690 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 TRMT2AQ8IZ69 625 aaKnown RBP8.86□□□□□ -0.99
CNOT1-222ENST00000570139 AHI1Q8N157 1196 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 UBR7Q8N806 425 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 RIN3Q8TB24 985 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 MORC4Q8TE76 937 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 HAUS7Q99871 368 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 TARS2Q9BW92 718 aaKnown RBP8.86□□□□□ -0.99
CNOT1-222ENST00000570139 USP26Q9BXU7 913 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 AAASQ9NRG9 546 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 KLF15Q9UIH9 416 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 LRRC37A3O60309 1634 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 PARP4Q9UKK3 1724 aaKnown RBP8.85□□□□□ -0.99
CNOT1-222ENST00000570139 NEURL1BA8MQ27 555 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 HTATSF1O43719 755 aaKnown RBP8.85□□□□□ -0.99
CNOT1-222ENST00000570139 PEX14O75381 377 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 HMOX1P09601 288 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 FGFR1P11362 822 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 POLR2BP30876 1174 aaKnown RBP8.85□□□□□ -0.99
CNOT1-222ENST00000570139 RIPK4P57078 832 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 PPP2R2AP63151 447 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 RING1Q06587 406 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 SUZ12Q15022 739 aaKnown RBP8.85□□□□□ -0.99
CNOT1-222ENST00000570139 TTF1Q15361 905 aaPredicted RBP8.85□□□□□ -0.99
CNOT1-222ENST00000570139 GRIK5Q16478 980 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 SLC6A19Q695T7 634 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 CNNM4Q6P4Q7 775 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 MRPL41Q8IXM3 137 aaKnown RBP8.85□□□□□ -0.99
CNOT1-222ENST00000570139 VWA5B2Q8N398 1253 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 NANOS1Q8WY41 292 aaKnown RBP8.85□□□□□ -0.99
CNOT1-222ENST00000570139 TMEM87BQ96K49 555 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 CCDC74BQ96LY2 380 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 SFMBT1Q9UHJ3 866 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 GDF2Q9UK05 429 aaPredicted RBP8.85□□□□□ -0.99
CNOT1-222ENST00000570139 HIF3AQ9Y2N7 669 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 RGPD5Q99666 1765 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 OVOS2A0A0G2JMS6 1433 aa8.85□□□□□ -0.99
CNOT1-222ENST00000570139 WIPF1O43516 503 aa8.84□□□□□ -0.99
CNOT1-222ENST00000570139 CLEC3AO75596 197 aa8.84□□□□□ -0.99
CNOT1-222ENST00000570139 GBP1P32455 592 aa8.84□□□□□ -0.99
CNOT1-222ENST00000570139 BAG6P46379 1132 aa8.84□□□□□ -0.99
CNOT1-222ENST00000570139 GUCY2FP51841 1108 aa8.84□□□□□ -0.99
CNOT1-222ENST00000570139 AXDND1Q5T1B0 1012 aaPredicted RBP8.84□□□□□ -0.99
CNOT1-222ENST00000570139 DUSP27Q5VZP5 1158 aa8.84□□□□□ -0.99
CNOT1-222ENST00000570139 CCSAPQ6IQ19 270 aaPredicted RBP8.84□□□□□ -0.99
CNOT1-222ENST00000570139 DDX46Q7L014 1031 aaKnown RBP8.84□□□□□ -0.99
CNOT1-222ENST00000570139 NECAB2Q7Z6G3 386 aa8.84□□□□□ -0.99
CNOT1-222ENST00000570139 WFDC8Q8IUA0 241 aa8.84□□□□□ -0.99
CNOT1-222ENST00000570139 HID1Q8IV36 788 aa8.84□□□□□ -0.99
CNOT1-222ENST00000570139 MAP4K3Q8IVH8 894 aa8.84□□□□□ -0.99
CNOT1-222ENST00000570139 EXOC8Q8IYI6 725 aa8.84□□□□□ -0.99
CNOT1-222ENST00000570139 WDR89Q96FK6 387 aaPredicted RBP8.84□□□□□ -0.99
CNOT1-222ENST00000570139 TRIM47Q96LD4 638 aa8.84□□□□□ -0.99
CNOT1-222ENST00000570139 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.84□□□□□ -0.99
CNOT1-222ENST00000570139 GBP3Q9H0R5 595 aa8.84□□□□□ -0.99
CNOT1-222ENST00000570139 CSADQ9Y600 493 aa8.84□□□□□ -0.99
CNOT1-222ENST00000570139 KIAA0232Q92628 1395 aa8.84□□□□□ -0.99
CNOT1-222ENST00000570139 RNF123Q5XPI4 1314 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 PKD1L3Q7Z443 1732 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 ST8SIA5O15466 376 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 EPHX1P07099 455 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 AMOTQ4VCS5 1084 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 ZBTB37Q5TC79 503 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.83□□□□□ -1
CNOT1-222ENST00000570139 KCT2Q8NC54 265 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 LRRN4CLQ8ND94 238 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 ZNF507Q8TCN5 953 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 PPP1R14AQ96A00 147 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 CLUHP3Q96NS8 147 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 WDR18Q9BV38 432 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 CARD10Q9BWT7 1032 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 RAD18Q9NS91 495 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 TJP2Q9UDY2 1190 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 RCAN3Q9UKA8 241 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 PCDHGC5Q9Y5F6 944 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 PLCH1Q4KWH8 1693 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 RGPD2P0DJD1 1756 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 NWD2Q9ULI1 1742 aa8.83□□□□□ -1
CNOT1-222ENST00000570139 LOC100289279A0A1B0GTE1 492 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 LILRB5O75023 590 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 AOC2O75106 756 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 PPFIA3O75145 1194 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 NPTXRO95502 500 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 TP53P04637 393 aaPredicted RBP8.82□□□□□ -1
CNOT1-222ENST00000570139 CTSBP07858 339 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 GNAI1P63096 354 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 ID3Q02535 119 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 NFE2Q16621 373 aaPredicted RBP8.82□□□□□ -1
CNOT1-222ENST00000570139 TRIM61Q5EBN2 209 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 YOD1Q5VVQ6 348 aaPredicted RBP8.82□□□□□ -1
CNOT1-222ENST00000570139 NSMFQ6X4W1 530 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 PPFIBP1Q86W92 1011 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 ZNF227Q86WZ6 799 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 TMEM192Q8IY95 271 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 CRACR2BQ8N4Y2 399 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms