RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 IGHDP01880 384 aa12.2□□□□□ -0.46
LINC00564-201ENST00000567258 TOP1P11387 765 aaKnown RBP12.2□□□□□ -0.46
LINC00564-201ENST00000567258 ALAS1P13196 640 aa12.2□□□□□ -0.46
LINC00564-201ENST00000567258 ADCYAP1R1P41586 468 aa12.2□□□□□ -0.46
LINC00564-201ENST00000567258 RTP1P59025 263 aa12.2□□□□□ -0.46
LINC00564-201ENST00000567258 HAND2P61296 217 aa12.2□□□□□ -0.46
LINC00564-201ENST00000567258 AKNAD1Q5T1N1 836 aa12.2□□□□□ -0.46
LINC00564-201ENST00000567258 CCDC174Q6PII3 467 aa12.2□□□□□ -0.46
LINC00564-201ENST00000567258 CWC27Q6UX04 472 aaKnown RBP12.2□□□□□ -0.46
LINC00564-201ENST00000567258 SLC39A5Q6ZMH5 540 aa12.2□□□□□ -0.46
LINC00564-201ENST00000567258 TDHQ8IZJ6 230 aa12.2□□□□□ -0.46
LINC00564-201ENST00000567258 ESR2Q92731 530 aa12.2□□□□□ -0.46
LINC00564-201ENST00000567258 FERMT2Q96AC1 680 aa12.2□□□□□ -0.46
LINC00564-201ENST00000567258 PRO3102Q9H379 93 aa12.2□□□□□ -0.46
LINC00564-201ENST00000567258 OSBPL3Q9H4L5 887 aa12.2□□□□□ -0.46
LINC00564-201ENST00000567258 IL17RBQ9NRM6 502 aa12.2□□□□□ -0.46
LINC00564-201ENST00000567258 RNF146Q9NTX7 359 aa12.2□□□□□ -0.46
LINC00564-201ENST00000567258 FOXP2O15409 715 aa12.19□□□□□ -0.46
LINC00564-201ENST00000567258 PGK1P00558 417 aa12.19□□□□□ -0.46
LINC00564-201ENST00000567258 NT5C2P49902 561 aa12.19□□□□□ -0.46
LINC00564-201ENST00000567258 MDM2Q00987 491 aaPredicted RBP12.19□□□□□ -0.46
LINC00564-201ENST00000567258 CCDC178Q5BJE1 867 aa12.19□□□□□ -0.46
LINC00564-201ENST00000567258 MAMDC4Q6UXC1 1216 aa12.19□□□□□ -0.46
LINC00564-201ENST00000567258 NUDT18Q6ZVK8 323 aa12.19□□□□□ -0.46
LINC00564-201ENST00000567258 ZNF589Q86UQ0 364 aaPredicted RBP12.19□□□□□ -0.46
LINC00564-201ENST00000567258 NUP133Q8WUM0 1156 aa12.19□□□□□ -0.46
LINC00564-201ENST00000567258 TTC14Q96N46 770 aa12.19□□□□□ -0.46
LINC00564-201ENST00000567258 TRERF1Q96PN7 1200 aa12.19□□□□□ -0.46
LINC00564-201ENST00000567258 ABHD16BQ9H3Z7 469 aa12.19□□□□□ -0.46
LINC00564-201ENST00000567258 PRDM5Q9NQX1 630 aaPredicted RBP12.19□□□□□ -0.46
LINC00564-201ENST00000567258 TCP11L1Q9NUJ3 509 aa12.19□□□□□ -0.46
LINC00564-201ENST00000567258 CTNNA3Q9UI47 895 aa12.19□□□□□ -0.46
LINC00564-201ENST00000567258 PNMA2Q9UL42 364 aa12.19□□□□□ -0.46
LINC00564-201ENST00000567258 CCPG1Q9ULG6 757 aa12.19□□□□□ -0.46
LINC00564-201ENST00000567258 RANBP2P49792 3224 aaKnown RBP12.19□□□□□ -0.46
LINC00564-201ENST00000567258 DNAJC25-GNG10A0A024R161 153 aa12.18□□□□□ -0.46
LINC00564-201ENST00000567258 ASB14A6NK59 587 aa12.18□□□□□ -0.46
LINC00564-201ENST00000567258 FGRP09769 529 aa12.18□□□□□ -0.46
LINC00564-201ENST00000567258 ZNF865P0CJ78 1059 aaPredicted RBP12.18□□□□□ -0.46
LINC00564-201ENST00000567258 TAL1P17542 331 aaPredicted RBP12.18□□□□□ -0.46
LINC00564-201ENST00000567258 ACVR2BQ13705 512 aa12.18□□□□□ -0.46
LINC00564-201ENST00000567258 NOL8Q76FK4 1167 aaKnown RBP12.18□□□□□ -0.46
LINC00564-201ENST00000567258 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC00564-201ENST00000567258 IQCA1Q86XH1 822 aa12.18□□□□□ -0.46
LINC00564-201ENST00000567258 VTI1AQ96AJ9 217 aa12.18□□□□□ -0.46
LINC00564-201ENST00000567258 AGBL1Q96MI9 1066 aa12.18□□□□□ -0.46
LINC00564-201ENST00000567258 TSEN34Q9BSV6 310 aaKnown RBP12.18□□□□□ -0.46
LINC00564-201ENST00000567258 PRR12Q9ULL5 1215 aa12.18□□□□□ -0.46
LINC00564-201ENST00000567258 DUSP11O75319 330 aaKnown RBP12.17□□□□□ -0.46
LINC00564-201ENST00000567258 SNAI1O95863 264 aaPredicted RBP12.17□□□□□ -0.46
LINC00564-201ENST00000567258 IMMTQ16891 758 aaKnown RBP12.17□□□□□ -0.46
LINC00564-201ENST00000567258 ZNF787Q6DD87 383 aa12.17□□□□□ -0.46
LINC00564-201ENST00000567258 NSMFQ6X4W1 530 aa12.17□□□□□ -0.46
LINC00564-201ENST00000567258 ARMCX2Q7L311 632 aa12.17□□□□□ -0.46
LINC00564-201ENST00000567258 PCSK9Q8NBP7 692 aaKnown RBP12.17□□□□□ -0.46
LINC00564-201ENST00000567258 MPHOSPH6Q99547 160 aaKnown RBP12.17□□□□□ -0.46
LINC00564-201ENST00000567258 TMEM47Q9BQJ4 181 aa12.17□□□□□ -0.46
LINC00564-201ENST00000567258 GPCPD1Q9NPB8 672 aa12.17□□□□□ -0.46
LINC00564-201ENST00000567258 PHF24Q9UPV7 400 aa12.17□□□□□ -0.46
LINC00564-201ENST00000567258 LTBP2Q14767 1821 aa12.16□□□□□ -0.46
LINC00564-201ENST00000567258 FRMPD2Q68DX3 1309 aaPredicted RBP12.16□□□□□ -0.46
LINC00564-201ENST00000567258 MOXD2PA6NHM9 499 aa12.16□□□□□ -0.46
LINC00564-201ENST00000567258 ICAM1P05362 532 aa12.16□□□□□ -0.46
LINC00564-201ENST00000567258 C6orf222P0C671 652 aaPredicted RBP12.16□□□□□ -0.46
LINC00564-201ENST00000567258 SNAP25P60880 206 aa12.16□□□□□ -0.46
LINC00564-201ENST00000567258 CCDC144BQ3MJ40 725 aa12.16□□□□□ -0.46
LINC00564-201ENST00000567258 TRIM60Q495X7 471 aa12.16□□□□□ -0.46
LINC00564-201ENST00000567258 SYDE2Q5VT97 1194 aa12.16□□□□□ -0.46
LINC00564-201ENST00000567258 CCDC144CPQ8IYA2 1237 aa12.16□□□□□ -0.46
LINC00564-201ENST00000567258 RUFY2Q8WXA3 655 aa12.16□□□□□ -0.46
LINC00564-201ENST00000567258 KAT14Q9H8E8 782 aa12.16□□□□□ -0.46
LINC00564-201ENST00000567258 CNNM2Q9H8M5 875 aa12.16□□□□□ -0.46
LINC00564-201ENST00000567258 CDHR5Q9HBB8 845 aa12.16□□□□□ -0.46
LINC00564-201ENST00000567258 A1CFQ9NQ94 594 aaKnown RBP12.16□□□□□ -0.46
LINC00564-201ENST00000567258 STARD7Q9NQZ5 370 aa12.16□□□□□ -0.46
LINC00564-201ENST00000567258 ADD3Q9UEY8 706 aaKnown RBP12.16□□□□□ -0.46
LINC00564-201ENST00000567258 TACC3Q9Y6A5 838 aa12.16□□□□□ -0.46
LINC00564-201ENST00000567258 SYNRGQ9UMZ2 1314 aa12.15□□□□□ -0.46
LINC00564-201ENST00000567258 A0A1W2PQ45 241 aaPredicted RBP12.15□□□□□ -0.46
LINC00564-201ENST00000567258 A0A1W2PQY0 241 aa12.15□□□□□ -0.46
LINC00564-201ENST00000567258 PTPDC1A2A3K4 754 aa12.15□□□□□ -0.46
LINC00564-201ENST00000567258 DCDC2CA8MYV0 355 aa12.15□□□□□ -0.46
LINC00564-201ENST00000567258 SLC16A2P36021 539 aa12.15□□□□□ -0.46
LINC00564-201ENST00000567258 NOVP48745 357 aa12.15□□□□□ -0.46
LINC00564-201ENST00000567258 ACLYP53396 1101 aa12.15□□□□□ -0.46
LINC00564-201ENST00000567258 CNTN2Q02246 1040 aa12.15□□□□□ -0.46
LINC00564-201ENST00000567258 LRIT3Q3SXY7 679 aa12.15□□□□□ -0.46
LINC00564-201ENST00000567258 GPATCH4Q5T3I0 446 aaKnown RBP12.15□□□□□ -0.46
LINC00564-201ENST00000567258 C1orf53Q5VUE5 145 aa12.15□□□□□ -0.46
LINC00564-201ENST00000567258 GLT1D1Q96MS3 346 aa12.15□□□□□ -0.46
LINC00564-201ENST00000567258 ZKSCAN3Q9BRR0 538 aa12.15□□□□□ -0.46
LINC00564-201ENST00000567258 DSCC1Q9BVC3 393 aa12.15□□□□□ -0.46
LINC00564-201ENST00000567258 KRT23Q9C075 422 aa12.15□□□□□ -0.46
LINC00564-201ENST00000567258 ZNF536O15090 1300 aa12.14□□□□□ -0.47
LINC00564-201ENST00000567258 MROH7Q68CQ1 1323 aa12.14□□□□□ -0.47
LINC00564-201ENST00000567258 B4DLN1 442 aa12.14□□□□□ -0.47
LINC00564-201ENST00000567258 ZEB2O60315 1214 aa12.14□□□□□ -0.47
LINC00564-201ENST00000567258 PQBP1O60828 265 aaKnown RBP12.14□□□□□ -0.47
LINC00564-201ENST00000567258 KDM4AO75164 1064 aa12.14□□□□□ -0.47
LINC00564-201ENST00000567258 CLTBP09497 229 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms