RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 FSCN1Q16658 493 aaKnown RBP20.41■□□□□ 0.86
MAP1LC3B-207ENST00000565788 USH1GQ495M9 461 aa20.41■□□□□ 0.86
MAP1LC3B-207ENST00000565788 CXCL17Q6UXB2 119 aa20.41■□□□□ 0.86
MAP1LC3B-207ENST00000565788 KIAA1211Q6ZU35 1233 aa20.41■□□□□ 0.86
MAP1LC3B-207ENST00000565788 KRT23Q9C075 422 aa20.41■□□□□ 0.86
MAP1LC3B-207ENST00000565788 AP5M1Q9H0R1 490 aa20.41■□□□□ 0.86
MAP1LC3B-207ENST00000565788 LAMA2P24043 3122 aaKnown RBP20.4■□□□□ 0.86
MAP1LC3B-207ENST00000565788 MYH6P13533 1939 aa20.4■□□□□ 0.86
MAP1LC3B-207ENST00000565788 FPGSQ05932 587 aa20.4■□□□□ 0.86
MAP1LC3B-207ENST00000565788 CDC37Q16543 378 aaPredicted RBP20.4■□□□□ 0.86
MAP1LC3B-207ENST00000565788 FAM126BQ8IXS8 530 aa20.4■□□□□ 0.86
MAP1LC3B-207ENST00000565788 RAD50Q92878 1312 aa20.4■□□□□ 0.86
MAP1LC3B-207ENST00000565788 CNNM2Q9H8M5 875 aa20.4■□□□□ 0.86
MAP1LC3B-207ENST00000565788 Q9Y3F1 56 aa20.4■□□□□ 0.86
MAP1LC3B-207ENST00000565788 LOC102724159A0A0B4J2E5 919 aa20.39■□□□□ 0.85
MAP1LC3B-207ENST00000565788 TIMP1P01033 207 aa20.39■□□□□ 0.85
MAP1LC3B-207ENST00000565788 PWP2Q15269 919 aaKnown RBP20.39■□□□□ 0.85
MAP1LC3B-207ENST00000565788 ASPRV1Q53RT3 343 aa20.39■□□□□ 0.85
MAP1LC3B-207ENST00000565788 FAM109BQ6ICB4 259 aaPredicted RBP20.39■□□□□ 0.85
MAP1LC3B-207ENST00000565788 ADGRF4Q8IZF3 695 aa20.39■□□□□ 0.85
MAP1LC3B-207ENST00000565788 CABYRO75952 493 aa20.38■□□□□ 0.85
MAP1LC3B-207ENST00000565788 DUSP28Q4G0W2 176 aa20.38■□□□□ 0.85
MAP1LC3B-207ENST00000565788 CYB5R4Q7L1T6 521 aa20.38■□□□□ 0.85
MAP1LC3B-207ENST00000565788 RNPC3Q96LT9 517 aaKnown RBP20.38■□□□□ 0.85
MAP1LC3B-207ENST00000565788 FAM161BQ96MY7 647 aa20.38■□□□□ 0.85
MAP1LC3B-207ENST00000565788 UBAC1Q9BSL1 405 aa20.38■□□□□ 0.85
MAP1LC3B-207ENST00000565788 WDR11Q9BZH6 1224 aa20.38■□□□□ 0.85
MAP1LC3B-207ENST00000565788 STXBP5LQ9Y2K9 1186 aa20.38■□□□□ 0.85
MAP1LC3B-207ENST00000565788 GRIN2DO15399 1336 aa20.37■□□□□ 0.85
MAP1LC3B-207ENST00000565788 RBM47A0AV96 593 aaKnown RBP20.37■□□□□ 0.85
MAP1LC3B-207ENST00000565788 TLR3O15455 904 aaKnown RBP20.37■□□□□ 0.85
MAP1LC3B-207ENST00000565788 ZEB2O60315 1214 aa20.37■□□□□ 0.85
MAP1LC3B-207ENST00000565788 CD4P01730 458 aa20.37■□□□□ 0.85
MAP1LC3B-207ENST00000565788 PARP1P09874 1014 aaKnown RBP20.37■□□□□ 0.85
MAP1LC3B-207ENST00000565788 EDNRBP24530 442 aa20.37■□□□□ 0.85
MAP1LC3B-207ENST00000565788 CHMLP26374 656 aa20.37■□□□□ 0.85
MAP1LC3B-207ENST00000565788 PTH1RQ03431 593 aa20.37■□□□□ 0.85
MAP1LC3B-207ENST00000565788 SLC43A3Q8NBI5 491 aa20.37■□□□□ 0.85
MAP1LC3B-207ENST00000565788 DNERQ8NFT8 737 aa20.37■□□□□ 0.85
MAP1LC3B-207ENST00000565788 GUCD1Q96NT3 240 aa20.37■□□□□ 0.85
MAP1LC3B-207ENST00000565788 ABCB11O95342 1321 aa20.36■□□□□ 0.85
MAP1LC3B-207ENST00000565788 PSMC6P62333 389 aa20.36■□□□□ 0.85
MAP1LC3B-207ENST00000565788 PDE4DQ08499 809 aa20.36■□□□□ 0.85
MAP1LC3B-207ENST00000565788 ITGA7Q13683 1181 aa20.36■□□□□ 0.85
MAP1LC3B-207ENST00000565788 SEC23AQ15436 765 aa20.36■□□□□ 0.85
MAP1LC3B-207ENST00000565788 QRICH1Q2TAL8 776 aa20.36■□□□□ 0.85
MAP1LC3B-207ENST00000565788 IFIT1BQ5T764 474 aaKnown RBP20.36■□□□□ 0.85
MAP1LC3B-207ENST00000565788 ZNF697Q5TEC3 545 aa20.36■□□□□ 0.85
MAP1LC3B-207ENST00000565788 MFSD5Q6N075 450 aa20.36■□□□□ 0.85
MAP1LC3B-207ENST00000565788 RUFY2Q8WXA3 655 aa20.36■□□□□ 0.85
MAP1LC3B-207ENST00000565788 TBC1D5Q92609 795 aa20.36■□□□□ 0.85
MAP1LC3B-207ENST00000565788 PPP1R12CQ9BZL4 782 aa20.36■□□□□ 0.85
MAP1LC3B-207ENST00000565788 DHX16O60231 1041 aaKnown RBP20.35■□□□□ 0.85
MAP1LC3B-207ENST00000565788 CYP21A2P08686 494 aa20.35■□□□□ 0.85
MAP1LC3B-207ENST00000565788 SMAD3P84022 425 aaKnown RBP20.35■□□□□ 0.85
MAP1LC3B-207ENST00000565788 STAG2Q8N3U4 1231 aa20.35■□□□□ 0.85
MAP1LC3B-207ENST00000565788 RGS22Q8NE09 1264 aa20.35■□□□□ 0.85
MAP1LC3B-207ENST00000565788 MPHOSPH6Q99547 160 aaKnown RBP20.35■□□□□ 0.85
MAP1LC3B-207ENST00000565788 JMJD4Q9H9V9 463 aa20.35■□□□□ 0.85
MAP1LC3B-207ENST00000565788 VAT1LQ9HCJ6 419 aa20.35■□□□□ 0.85
MAP1LC3B-207ENST00000565788 SLC17A8Q8NDX2 589 aa20.34■□□□□ 0.85
MAP1LC3B-207ENST00000565788 OR6J1Q8NGC5 347 aa20.34■□□□□ 0.85
MAP1LC3B-207ENST00000565788 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.34■□□□□ 0.85
MAP1LC3B-207ENST00000565788 CSF2RAP15509 400 aa20.33■□□□□ 0.85
MAP1LC3B-207ENST00000565788 PPIGQ13427 754 aaKnown RBP eCLIP20.33■□□□□ 0.85
MAP1LC3B-207ENST00000565788 FBXO11Q86XK2 927 aa20.33■□□□□ 0.85
MAP1LC3B-207ENST00000565788 SYTL5Q8TDW5 730 aaPredicted RBP20.33■□□□□ 0.85
MAP1LC3B-207ENST00000565788 COPS5Q92905 334 aa20.33■□□□□ 0.85
MAP1LC3B-207ENST00000565788 TAAR1Q96RJ0 339 aa20.33■□□□□ 0.85
MAP1LC3B-207ENST00000565788 COL20A1Q9P218 1284 aa20.33■□□□□ 0.85
MAP1LC3B-207ENST00000565788 TAF6LQ9Y6J9 622 aa20.33■□□□□ 0.85
MAP1LC3B-207ENST00000565788 SGSM2O43147 1006 aa20.32■□□□□ 0.84
MAP1LC3B-207ENST00000565788 B4GALT4O60513 344 aa20.32■□□□□ 0.84
MAP1LC3B-207ENST00000565788 CYP2C18P33260 490 aa20.32■□□□□ 0.84
MAP1LC3B-207ENST00000565788 TRDNQ13061 729 aa20.32■□□□□ 0.84
MAP1LC3B-207ENST00000565788 PPP2R5BQ15173 497 aa20.32■□□□□ 0.84
MAP1LC3B-207ENST00000565788 C16orf59Q7L2K0 433 aa20.32■□□□□ 0.84
MAP1LC3B-207ENST00000565788 TMEM199Q8N511 208 aa20.32■□□□□ 0.84
MAP1LC3B-207ENST00000565788 SCFD2Q8WU76 684 aa20.32■□□□□ 0.84
MAP1LC3B-207ENST00000565788 POLR3EQ9NVU0 708 aa20.32■□□□□ 0.84
MAP1LC3B-207ENST00000565788 MAD2L2Q9UI95 211 aa20.32■□□□□ 0.84
MAP1LC3B-207ENST00000565788 U3KPZ7 1027 aaPredicted RBP20.32■□□□□ 0.84
MAP1LC3B-207ENST00000565788 UMODL1Q5DID0 1318 aa20.31■□□□□ 0.84
MAP1LC3B-207ENST00000565788 B4DLN1 442 aa20.31■□□□□ 0.84
MAP1LC3B-207ENST00000565788 KLRF2D3W0D1 207 aa20.31■□□□□ 0.84
MAP1LC3B-207ENST00000565788 NKRFO15226 690 aaKnown RBP eCLIP20.31■□□□□ 0.843e-6■■□□□ 12.3
MAP1LC3B-207ENST00000565788 ARIH2O95376 493 aa20.31■□□□□ 0.84
MAP1LC3B-207ENST00000565788 MYL3P08590 195 aa20.31■□□□□ 0.84
MAP1LC3B-207ENST00000565788 CPT1AP50416 773 aa20.31■□□□□ 0.84
MAP1LC3B-207ENST00000565788 MRPL12P52815 198 aaKnown RBP20.31■□□□□ 0.84
MAP1LC3B-207ENST00000565788 PURAQ00577 322 aaKnown RBP20.31■□□□□ 0.84
MAP1LC3B-207ENST00000565788 TMEM240Q5SV17 173 aa20.31■□□□□ 0.84
MAP1LC3B-207ENST00000565788 MCF2L2Q86YR7 1114 aa20.31■□□□□ 0.84
MAP1LC3B-207ENST00000565788 SEZ6LQ9BYH1 1024 aa20.31■□□□□ 0.84
MAP1LC3B-207ENST00000565788 MAF1Q9H063 256 aa20.31■□□□□ 0.84
MAP1LC3B-207ENST00000565788 TRPV6Q9H1D0 765 aa20.31■□□□□ 0.84
MAP1LC3B-207ENST00000565788 TTYH1Q9H313 450 aaPredicted RBP20.31■□□□□ 0.84
MAP1LC3B-207ENST00000565788 SEMA6BQ9H3T3 888 aa20.31■□□□□ 0.84
MAP1LC3B-207ENST00000565788 MRPL11Q9Y3B7 192 aaKnown RBP20.31■□□□□ 0.84
MAP1LC3B-207ENST00000565788 SCN10AQ9Y5Y9 1956 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms