RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 MRPS25P82663 173 aaKnown RBP15.58■□□□□ 0.09
GTF3C1-203ENST00000562609 MORC3Q14149 939 aa15.58■□□□□ 0.09
GTF3C1-203ENST00000562609 KCNB1Q14721 858 aa15.58■□□□□ 0.09
GTF3C1-203ENST00000562609 PTPAQ15257 358 aa15.58■□□□□ 0.09
GTF3C1-203ENST00000562609 PAPD7Q5XG87 772 aaKnown RBP15.58■□□□□ 0.09
GTF3C1-203ENST00000562609 KLHL10Q6JEL2 608 aa15.58■□□□□ 0.09
GTF3C1-203ENST00000562609 GRAMD1CQ8IYS0 662 aa15.58■□□□□ 0.09
GTF3C1-203ENST00000562609 SAAL1Q96ER3 474 aa15.58■□□□□ 0.09
GTF3C1-203ENST00000562609 THOC1Q96FV9 657 aaKnown RBP15.58■□□□□ 0.09
GTF3C1-203ENST00000562609 BORCS6Q96GS4 357 aa15.58■□□□□ 0.09
GTF3C1-203ENST00000562609 RIOK1Q9BRS2 568 aaKnown RBP15.58■□□□□ 0.09
GTF3C1-203ENST00000562609 SLC26A6Q9BXS9 759 aa15.58■□□□□ 0.09
GTF3C1-203ENST00000562609 ZBTB12Q9Y330 459 aaPredicted RBP15.58■□□□□ 0.09
GTF3C1-203ENST00000562609 LAMB2P55268 1798 aa15.58■□□□□ 0.09
GTF3C1-203ENST00000562609 BAZ2AQ9UIF9 1905 aaKnown RBP15.58■□□□□ 0.09
GTF3C1-203ENST00000562609 PNPLA7Q6ZV29 1317 aa15.58■□□□□ 0.09
GTF3C1-203ENST00000562609 RNF225M0QZC1 329 aaPredicted RBP15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 OPLAHO14841 1288 aa15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 HIBADHP31937 336 aaKnown RBP15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 GUCY1A2P33402 732 aa15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 PLCD1P51178 756 aa15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 SPRED3Q2MJR0 410 aa15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 FILIP1LQ4L180 1135 aa15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 ALS2CLQ60I27 953 aa15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 C6orf89Q6UWU4 347 aa15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 TBC1D31Q96DN5 1066 aa15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 TMEM87BQ96K49 555 aa15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 IRAK4Q9NWZ3 460 aa15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 REXO2Q9Y3B8 237 aaKnown RBP15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 SPATA31A6Q5VVP1 1343 aa15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 DNM1LO00429 736 aa15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 MECOMQ03112 1051 aa15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 RBBP5Q15291 538 aaKnown RBP15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 KDM7AQ6ZMT4 941 aa15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 RASSF8Q8NHQ8 419 aa15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 NUP88Q99567 741 aaPredicted RBP15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 DMGDHQ9UI17 866 aaKnown RBP15.58■□□□□ 0.08
GTF3C1-203ENST00000562609 E7EVH7 732 aa15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 GNAT2P19087 354 aa15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 NTRK3Q16288 839 aa15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 CDCA2Q69YH5 1023 aaPredicted RBP15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 FBXO33Q7Z6M2 555 aa15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 ZIM3Q96PE6 472 aa15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 CHP1Q99653 195 aa15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 EPN1Q9Y6I3 576 aaPredicted RBP15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 CICQ96RK0 1608 aaPredicted RBP15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 BAZ2BQ9UIF8 2168 aaKnown RBP15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 SNUPNO95149 360 aaKnown RBP15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 FAM107AO95990 144 aa15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 IARSP41252 1262 aaKnown RBP15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 KRT40Q6A162 431 aa15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 KIAA1328Q86T90 577 aa15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 GGA2Q9UJY4 613 aa15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 WDR19Q8NEZ3 1342 aa15.57■□□□□ 0.08
GTF3C1-203ENST00000562609 hCG_1642624A0A1W2PR95 340 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 CAND2O75155 1236 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 CCT6AP40227 531 aaKnown RBP15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 SNX1Q13596 522 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 WTAPQ15007 396 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 CCDC122Q5T0U0 273 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 SPDYE1Q8NFV5 336 aaPredicted RBP15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 NSUN4Q96CB9 384 aaKnown RBP15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 LRRC1Q9BTT6 524 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 OSBPL7Q9BZF2 842 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 KRT23Q9C075 422 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 CHD4Q14839 1912 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 USP17L12C9JPN9 530 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 USP17L21D6R901 530 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 NDUFA10O95299 355 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 SLC7A5Q01650 507 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 CNBD1Q8NA66 436 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 HOOK2Q96ED9 719 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 HAUS4Q9H6D7 363 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 SERTAD1Q9UHV2 236 aa15.56■□□□□ 0.08
GTF3C1-203ENST00000562609 POLR2DO15514 142 aaKnown RBP15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 ATP2C2O75185 946 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 TRIM37O94972 964 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 NR1D1P20393 614 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 ERCC5P28715 1186 aaPredicted RBP15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 SARSP49591 514 aaKnown RBP15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 NT5DC1Q5TFE4 455 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 SPATA1Q5VX52 437 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 SGMS1Q86VZ5 419 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 NSMCE1Q8WV22 266 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 CYFIP2Q96F07 1278 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 CTAGE1Q96RT6 745 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 MAP3K14Q99558 947 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 CNNM2Q9H8M5 875 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 JADE2Q9NQC1 790 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 BATF3Q9NR55 127 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 SCN7AQ01118 1682 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 KRT9P35527 623 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 EPHB4P54760 987 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 IQCEQ6IPM2 695 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 QTRT2Q9H974 415 aaKnown RBP15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 PPANQ9NQ55 473 aaKnown RBP15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 KCNJ14Q9UNX9 436 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 MYH2Q9UKX2 1941 aa15.55■□□□□ 0.08
GTF3C1-203ENST00000562609 MYH13Q9UKX3 1938 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms