RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 GUCY1A2P33402 732 aa11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 SH3BP2P78314 561 aa11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 ATP2B2Q01814 1243 aa11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 C12orf60Q5U649 245 aa11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 TMEM179Q6ZVK1 233 aa11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 NOP9Q86U38 636 aaKnown RBP11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 CCDC17Q96LX7 622 aa11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 LNPKQ9C0E8 428 aa11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 PUS7LQ9H0K6 701 aaKnown RBP11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 CCSER2Q9H7U1 834 aa11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 RBPJLQ9UBG7 517 aa11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 SERTAD1Q9UHV2 236 aa11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 SLC4A4Q9Y6R1 1079 aa11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 MYH7P12883 1935 aa11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 CENPFP49454 3210 aa11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 MPHOSPH10O00566 681 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 RNF113AO15541 343 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 CCL5P13501 91 aa11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 ATP2B1P20020 1258 aa11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 ZNF76P36508 570 aa11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 GJA8P48165 433 aa11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 SEPT2Q15019 361 aa11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 MTFR1Q15390 333 aa11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 INTS6LQ5JSJ4 861 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 CATSPERGQ6ZRH7 1159 aa11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 ACER1Q8TDN7 264 aa11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 APPBP2Q92624 585 aa11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 GCC1Q96CN9 775 aa11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 STRBPQ96SI9 672 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 C2orf49Q9BVC5 232 aaPredicted RBP11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 RNF208Q9H0X6 261 aa11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 GJD2Q9UKL4 321 aa11.74□□□□□ -0.53
HNRNPC-228ENST00000557033 GLRX3O76003 335 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 CHGBP05060 677 aa11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 CYP2D6P10635 497 aa11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 GNAT2P19087 354 aa11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 MAPK4P31152 587 aa11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 HDAC1Q13547 482 aaPredicted RBP11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 ENOX2Q16206 610 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 SBK1Q52WX2 424 aa11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 CTR9Q6PD62 1173 aa11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 LBX2Q6XYB7 198 aa11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 DHX38Q92620 1227 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 DYNLL2Q96FJ2 89 aa11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 CRBNQ96SW2 442 aa11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 NIF3L1Q9GZT8 377 aa11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 ACBD3Q9H3P7 528 aa11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 TXNRD2Q9NNW7 524 aa11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 ARPP21Q9UBL0 812 aaPredicted RBP11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 RABGAP1Q9Y3P9 1069 aa11.73□□□□□ -0.53
HNRNPC-228ENST00000557033 ZBTB39O15060 712 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 SGPL1O95470 568 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 XRCC5P13010 732 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 ELNP15502 786 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 VCAM1P19320 739 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 CDK8P49336 464 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 ERVK-24P63145 666 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 CCNA1P78396 465 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 FOXK2Q01167 660 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 COG2Q14746 738 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 ZYXQ15942 572 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 ALG1LQ6GMV1 187 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 C16orf86Q6ZW13 317 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 CCAR1Q8IX12 1150 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 SLC44A5Q8NCS7 719 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 SOCS4Q8WXH5 440 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 MARVELD3Q96A59 401 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 YTHDC1Q96MU7 727 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 SH2D4AQ9H788 454 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 ARHGEF10LQ9HCE6 1279 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 HOXC10Q9NYD6 342 aa11.72□□□□□ -0.53
HNRNPC-228ENST00000557033 DOCK3Q8IZD9 2030 aa11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 BAZ2AQ9UIF9 1905 aaKnown RBP11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 A0A1W2PRG0 241 aa11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 GSG1L2A8MUP6 293 aa11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 ST18O60284 1047 aa11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 AKR1B1P15121 316 aa11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 MX1P20591 662 aa11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 ANKRD45Q5TZF3 282 aa11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 TSHZ3Q63HK5 1081 aa11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 SIAH1Q8IUQ4 282 aa11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 PI4K2BQ8TCG2 481 aa11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 LPAR1Q92633 364 aa11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 OSBP2Q969R2 916 aa11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 RPAP3Q9H6T3 665 aaPredicted RBP11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 KANSL2Q9H9L4 492 aa11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 ETNK1Q9HBU6 452 aa11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 LRFN2Q9ULH4 789 aa11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 TMX2Q9Y320 296 aa11.71□□□□□ -0.53
HNRNPC-228ENST00000557033 KIAA0100Q14667 2235 aaKnown RBP11.71□□□□□ -0.54
HNRNPC-228ENST00000557033 CYP2D7A0A087X1C5 515 aa11.7□□□□□ -0.54
HNRNPC-228ENST00000557033 ANKRD62A6NC57 917 aa11.7□□□□□ -0.54
HNRNPC-228ENST00000557033 HMGCRP04035 888 aa11.7□□□□□ -0.54
HNRNPC-228ENST00000557033 PLEKHH3Q7Z736 793 aa11.7□□□□□ -0.54
HNRNPC-228ENST00000557033 TICAM2Q86XR7 235 aa11.7□□□□□ -0.54
HNRNPC-228ENST00000557033 U2AF1L4Q8WU68 220 aaKnown RBP11.7□□□□□ -0.54
HNRNPC-228ENST00000557033 PAGR1Q9BTK6 254 aa11.7□□□□□ -0.54
HNRNPC-228ENST00000557033 ZNF287Q9HBT7 754 aa11.7□□□□□ -0.54
HNRNPC-228ENST00000557033 PAK6Q9NQU5 681 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms