RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 LCE1DQ5T752 114 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 KRT28Q7Z3Y7 464 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 USP48Q86UV5 1035 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 KIAA0825Q8IV33 1275 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 SLITRK4Q8IW52 837 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 REXO1Q8N1G1 1221 aaKnown RBP6.99□□□□□ -1.29
SCAF11-214ENST00000550893 FLAD1Q8NFF5 587 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 NKD1Q969G9 470 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 C8orf37Q96NL8 207 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 GPR62Q9BZJ7 368 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 METTL5Q9NRN9 209 aaKnown RBP6.99□□□□□ -1.29
SCAF11-214ENST00000550893 GMIPQ9P107 970 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 KCNH3Q9ULD8 1083 aa6.99□□□□□ -1.29
SCAF11-214ENST00000550893 CENPJQ9HC77 1338 aaPredicted RBP6.99□□□□□ -1.29
SCAF11-214ENST00000550893 UBOX5O94941 541 aa6.98□□□□□ -1.29
SCAF11-214ENST00000550893 RAG1P15918 1043 aa6.98□□□□□ -1.29
SCAF11-214ENST00000550893 FZD5Q13467 585 aa6.98□□□□□ -1.29
SCAF11-214ENST00000550893 OVOS1Q6IE37 1185 aa6.98□□□□□ -1.29
SCAF11-214ENST00000550893 TMPRSS7Q7RTY8 843 aa6.98□□□□□ -1.29
SCAF11-214ENST00000550893 FAM168AQ92567 244 aa6.98□□□□□ -1.29
SCAF11-214ENST00000550893 RNF34Q969K3 372 aa6.98□□□□□ -1.29
SCAF11-214ENST00000550893 VWCEQ96DN2 955 aa6.98□□□□□ -1.29
SCAF11-214ENST00000550893 TESK2Q96S53 571 aa6.98□□□□□ -1.29
SCAF11-214ENST00000550893 CDK19Q9BWU1 502 aa6.98□□□□□ -1.29
SCAF11-214ENST00000550893 TRIT1Q9H3H1 467 aaKnown RBP6.98□□□□□ -1.29
SCAF11-214ENST00000550893 C19orf73Q9NVV2 129 aa6.98□□□□□ -1.29
SCAF11-214ENST00000550893 PCDHGB7Q9Y5F8 929 aa6.98□□□□□ -1.29
SCAF11-214ENST00000550893 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.98□□□□□ -1.29
SCAF11-214ENST00000550893 RGPD1P0DJD0 1748 aa6.98□□□□□ -1.29
SCAF11-214ENST00000550893 NUP188Q5SRE5 1749 aa6.98□□□□□ -1.29
SCAF11-214ENST00000550893 ACEP12821 1306 aa6.98□□□□□ -1.29
SCAF11-214ENST00000550893 ARHGEF10O15013 1369 aa6.97□□□□□ -1.29
SCAF11-214ENST00000550893 ROCK2O75116 1388 aaKnown RBP6.97□□□□□ -1.29
SCAF11-214ENST00000550893 EIF3AQ14152 1382 aaKnown RBP6.97□□□□□ -1.29
SCAF11-214ENST00000550893 OVOS2A0A0J9YW53 1432 aa6.97□□□□□ -1.29
SCAF11-214ENST00000550893 VAMP1P23763 118 aa6.97□□□□□ -1.29
SCAF11-214ENST00000550893 ZNF165P49910 485 aa6.97□□□□□ -1.29
SCAF11-214ENST00000550893 GAB4Q2WGN9 574 aa6.97□□□□□ -1.29
SCAF11-214ENST00000550893 CDCP2Q5VXM1 449 aa6.97□□□□□ -1.29
SCAF11-214ENST00000550893 OVOS2Q6IE36 1432 aa6.97□□□□□ -1.29
SCAF11-214ENST00000550893 CREG2Q8IUH2 290 aa6.97□□□□□ -1.29
SCAF11-214ENST00000550893 ATG4CQ96DT6 458 aa6.97□□□□□ -1.29
SCAF11-214ENST00000550893 ALPK1Q96QP1 1244 aa6.97□□□□□ -1.29
SCAF11-214ENST00000550893 ASPNQ9BXN1 380 aa6.97□□□□□ -1.29
SCAF11-214ENST00000550893 ANTXR1Q9H6X2 564 aa6.97□□□□□ -1.29
SCAF11-214ENST00000550893 GPATCH2Q9NW75 528 aa6.97□□□□□ -1.29
SCAF11-214ENST00000550893 COL5A2P05997 1499 aaPredicted RBP6.97□□□□□ -1.29
SCAF11-214ENST00000550893 ABCC6O95255 1503 aa6.96□□□□□ -1.29
SCAF11-214ENST00000550893 CPDO75976 1380 aa6.96□□□□□ -1.29
SCAF11-214ENST00000550893 RGPD3A6NKT7 1758 aaPredicted RBP6.96□□□□□ -1.3
SCAF11-214ENST00000550893 RGPD4Q7Z3J3 1758 aa6.96□□□□□ -1.3
SCAF11-214ENST00000550893 POLR2BP30876 1174 aaKnown RBP6.96□□□□□ -1.3
SCAF11-214ENST00000550893 RACK1P63244 317 aaKnown RBP6.96□□□□□ -1.3
SCAF11-214ENST00000550893 FYB2Q5VWT5 728 aa6.96□□□□□ -1.3
SCAF11-214ENST00000550893 OGFOD2Q6N063 350 aa6.96□□□□□ -1.3
SCAF11-214ENST00000550893 TSPYL5Q86VY4 417 aaPredicted RBP6.96□□□□□ -1.3
SCAF11-214ENST00000550893 CNNM2Q9H8M5 875 aa6.96□□□□□ -1.3
SCAF11-214ENST00000550893 SLAMF8Q9P0V8 285 aa6.96□□□□□ -1.3
SCAF11-214ENST00000550893 POGKQ9P215 609 aa6.96□□□□□ -1.3
SCAF11-214ENST00000550893 DUSP13Q9UII6 198 aa6.96□□□□□ -1.3
SCAF11-214ENST00000550893 KIAA0232Q92628 1395 aa6.95□□□□□ -1.3
SCAF11-214ENST00000550893 DNAJC25-GNG10A0A024R161 153 aa6.95□□□□□ -1.3
SCAF11-214ENST00000550893 SHISA3A0PJX4 238 aa6.95□□□□□ -1.3
SCAF11-214ENST00000550893 FAM83GA6ND36 823 aa6.95□□□□□ -1.3
SCAF11-214ENST00000550893 SCAMP3O14828 347 aaKnown RBP6.95□□□□□ -1.3
SCAF11-214ENST00000550893 CHMP4BP1P59074 171 aa6.95□□□□□ -1.3
SCAF11-214ENST00000550893 RALGPS1Q5JS13 557 aa6.95□□□□□ -1.3
SCAF11-214ENST00000550893 ZNF772Q68DY9 489 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-214ENST00000550893 NLRC3Q7RTR2 1065 aa6.95□□□□□ -1.3
SCAF11-214ENST00000550893 DDX41Q9UJV9 622 aaKnown RBP6.95□□□□□ -1.3
SCAF11-214ENST00000550893 A0A1W2PP64 1363 aa6.95□□□□□ -1.3
SCAF11-214ENST00000550893 DISP2A7MBM2 1401 aa6.94□□□□□ -1.3
SCAF11-214ENST00000550893 GDNFP39905 211 aa6.94□□□□□ -1.3
SCAF11-214ENST00000550893 AFMP43652 599 aa6.94□□□□□ -1.3
SCAF11-214ENST00000550893 RBM6P78332 1123 aaKnown RBP6.94□□□□□ -1.3
SCAF11-214ENST00000550893 TTC6Q86TZ1 520 aa6.94□□□□□ -1.3
SCAF11-214ENST00000550893 ZSWIM9Q86XI8 627 aa6.94□□□□□ -1.3
SCAF11-214ENST00000550893 TMEM40Q8WWA1 233 aa6.94□□□□□ -1.3
SCAF11-214ENST00000550893 MRRFQ96E11 262 aaKnown RBP6.94□□□□□ -1.3
SCAF11-214ENST00000550893 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.94□□□□□ -1.3
SCAF11-214ENST00000550893 TOGARAM1Q9Y4F4 1720 aa6.93□□□□□ -1.3
SCAF11-214ENST00000550893 TUBGCP6Q96RT7 1819 aa6.93□□□□□ -1.3
SCAF11-214ENST00000550893 MEIS3P2A8K0S8 358 aa6.93□□□□□ -1.3
SCAF11-214ENST00000550893 NME1P15531 152 aaKnown RBP6.93□□□□□ -1.3
SCAF11-214ENST00000550893 EGR3Q06889 387 aa6.93□□□□□ -1.3
SCAF11-214ENST00000550893 KCNMB1Q16558 191 aa6.93□□□□□ -1.3
SCAF11-214ENST00000550893 LRRFIP1Q32MZ4 808 aaKnown RBP6.93□□□□□ -1.3
SCAF11-214ENST00000550893 NBPF12Q5TAG4 269 aaPredicted RBP6.93□□□□□ -1.3
SCAF11-214ENST00000550893 MEX3CQ5U5Q3 659 aaKnown RBP6.93□□□□□ -1.3
SCAF11-214ENST00000550893 CCDC120Q96HB5 630 aa6.93□□□□□ -1.3
SCAF11-214ENST00000550893 ADAMTS10Q9H324 1103 aa6.93□□□□□ -1.3
SCAF11-214ENST00000550893 PCDHA11Q9Y5I1 949 aa6.93□□□□□ -1.3
SCAF11-214ENST00000550893 PAPPAQ13219 1627 aa6.92□□□□□ -1.3
SCAF11-214ENST00000550893 RNF4P78317 190 aa6.92□□□□□ -1.3
SCAF11-214ENST00000550893 VPS72Q15906 364 aa6.92□□□□□ -1.3
SCAF11-214ENST00000550893 METTL16Q86W50 562 aaKnown RBP6.92□□□□□ -1.3
SCAF11-214ENST00000550893 UNC5CLQ8IV45 518 aa6.92□□□□□ -1.3
SCAF11-214ENST00000550893 POU5F2Q8N7G0 328 aa6.92□□□□□ -1.3
SCAF11-214ENST00000550893 RGS22Q8NE09 1264 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms