RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 CEP57L1Q8IYX8 460 aa17.27■□□□□ 0.36
CLPTM1-202ENST00000541297 FAM177A1Q8N128 213 aaPredicted RBP17.27■□□□□ 0.36
CLPTM1-202ENST00000541297 IL17AQ16552 155 aa17.27■□□□□ 0.35
CLPTM1-202ENST00000541297 ZNF579Q8NAF0 562 aaKnown RBP17.27■□□□□ 0.35
CLPTM1-202ENST00000541297 TBCKQ8TEA7 893 aa17.27■□□□□ 0.35
CLPTM1-202ENST00000541297 ZNF341Q9BYN7 854 aa17.27■□□□□ 0.35
CLPTM1-202ENST00000541297 FAM53CQ9NYF3 392 aa17.27■□□□□ 0.35
CLPTM1-202ENST00000541297 FAM237AA0A1B0GTK4 181 aa17.26■□□□□ 0.35
CLPTM1-202ENST00000541297 CCNT1O60563 726 aaKnown RBP17.26■□□□□ 0.35
CLPTM1-202ENST00000541297 INPP5BP32019 993 aa17.26■□□□□ 0.35
CLPTM1-202ENST00000541297 TAF3Q5VWG9 929 aa17.26■□□□□ 0.35
CLPTM1-202ENST00000541297 STAT2P52630 851 aa17.26■□□□□ 0.35
CLPTM1-202ENST00000541297 DGKZQ13574 1117 aa17.26■□□□□ 0.35
CLPTM1-202ENST00000541297 SYMPKQ92797 1274 aaKnown RBP17.26■□□□□ 0.35
CLPTM1-202ENST00000541297 FERMT2Q96AC1 680 aa17.26■□□□□ 0.35
CLPTM1-202ENST00000541297 TMEM60Q9H2L4 133 aa17.26■□□□□ 0.35
CLPTM1-202ENST00000541297 VCPKMTQ9H867 229 aa17.26■□□□□ 0.35
CLPTM1-202ENST00000541297 RIC8AQ9NPQ8 531 aa17.26■□□□□ 0.35
CLPTM1-202ENST00000541297 PRR12Q9ULL5 1215 aa17.26■□□□□ 0.35
CLPTM1-202ENST00000541297 MYH7BA7E2Y1 1941 aa17.25■□□□□ 0.35
CLPTM1-202ENST00000541297 C4orf32Q8N8J7 132 aa17.25■□□□□ 0.35
CLPTM1-202ENST00000541297 CNNM3Q8NE01 707 aa17.25■□□□□ 0.35
CLPTM1-202ENST00000541297 CUL5Q93034 780 aa17.25■□□□□ 0.35
CLPTM1-202ENST00000541297 PSTPIP2Q9H939 334 aa17.25■□□□□ 0.35
CLPTM1-202ENST00000541297 KCND1Q9NSA2 647 aa17.25■□□□□ 0.35
CLPTM1-202ENST00000541297 ZNF446Q9NWS9 450 aa17.25■□□□□ 0.35
CLPTM1-202ENST00000541297 BIN1O00499 593 aa17.25■□□□□ 0.35
CLPTM1-202ENST00000541297 PNOCQ13519 176 aa17.25■□□□□ 0.35
CLPTM1-202ENST00000541297 C9orf131Q5VYM1 1079 aa17.25■□□□□ 0.35
CLPTM1-202ENST00000541297 PPP1R18Q6NYC8 613 aa17.25■□□□□ 0.35
CLPTM1-202ENST00000541297 NEK8Q86SG6 692 aa17.25■□□□□ 0.35
CLPTM1-202ENST00000541297 APOBEC3FQ8IUX4 373 aaKnown RBP17.25■□□□□ 0.35
CLPTM1-202ENST00000541297 ST7Q9NRC1 585 aa17.25■□□□□ 0.35
CLPTM1-202ENST00000541297 KIAA1468Q9P260 1216 aa17.25■□□□□ 0.35
CLPTM1-202ENST00000541297 USP17L15C9J2P7 530 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 USP17L13C9JLJ4 530 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 USP17L11C9JVI0 530 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 USP17L18D6R9N7 530 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 USP17L22D6RA61 530 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 USP17L17D6RBQ6 530 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 USP17L19D6RCP7 530 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 USP17L20D6RJB6 530 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 FOXN1O15353 648 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 GSDMDP57764 484 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 USP17L24Q0WX57 530 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 E4F1Q66K89 784 aaPredicted RBP17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 USP17L6PQ6QN14 398 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 DLK2Q6UY11 383 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 KIFC2Q96AC6 838 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 SYNPO2Q9UMS6 1093 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 A0A087X0B3 334 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 CDC25AP30304 524 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 ISM2Q6H9L7 571 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 KRBA2Q6ZNG9 492 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 ZKSCAN4Q969J2 545 aaPredicted RBP17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 TIGD1Q96MW7 591 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 NAT10Q9H0A0 1025 aaKnown RBP17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 SERTAD1Q9UHV2 236 aa17.24■□□□□ 0.35
CLPTM1-202ENST00000541297 BTNL9Q6UXG8 535 aa17.23■□□□□ 0.35
CLPTM1-202ENST00000541297 FBXO11Q86XK2 927 aa17.23■□□□□ 0.35
CLPTM1-202ENST00000541297 LRRN4CLQ8ND94 238 aa17.23■□□□□ 0.35
CLPTM1-202ENST00000541297 AMNQ9BXJ7 453 aa17.23■□□□□ 0.35
CLPTM1-202ENST00000541297 SH2D4AQ9H788 454 aa17.23■□□□□ 0.35
CLPTM1-202ENST00000541297 FBXO28Q9NVF7 368 aa17.23■□□□□ 0.35
CLPTM1-202ENST00000541297 MRPL12P52815 198 aaKnown RBP17.23■□□□□ 0.35
CLPTM1-202ENST00000541297 PRKG1Q13976 671 aa17.23■□□□□ 0.35
CLPTM1-202ENST00000541297 ERCC6LQ2NKX8 1250 aa17.23■□□□□ 0.35
CLPTM1-202ENST00000541297 DHX58Q96C10 678 aa17.23■□□□□ 0.35
CLPTM1-202ENST00000541297 KIF2AO00139 706 aaPredicted RBP17.22■□□□□ 0.35
CLPTM1-202ENST00000541297 CTNND1O60716 968 aaKnown RBP17.22■□□□□ 0.35
CLPTM1-202ENST00000541297 CCDC174Q6PII3 467 aa17.22■□□□□ 0.35
CLPTM1-202ENST00000541297 GRAMD1CQ8IYS0 662 aa17.22■□□□□ 0.35
CLPTM1-202ENST00000541297 PPP1R13BQ96KQ4 1090 aa17.22■□□□□ 0.35
CLPTM1-202ENST00000541297 WRNIP1Q96S55 665 aa17.22■□□□□ 0.35
CLPTM1-202ENST00000541297 DOCK1Q14185 1865 aa17.22■□□□□ 0.35
CLPTM1-202ENST00000541297 LMOD1P29536 600 aaPredicted RBP17.22■□□□□ 0.35
CLPTM1-202ENST00000541297 CLK2P49760 499 aaKnown RBP17.22■□□□□ 0.35
CLPTM1-202ENST00000541297 DPCR1Q3MIW9 517 aa17.22■□□□□ 0.35
CLPTM1-202ENST00000541297 ARMCX5Q6P1M9 558 aa17.22■□□□□ 0.35
CLPTM1-202ENST00000541297 SYT10Q6XYQ8 523 aa17.22■□□□□ 0.35
CLPTM1-202ENST00000541297 XPO4Q9C0E2 1151 aaKnown RBP17.22■□□□□ 0.35
CLPTM1-202ENST00000541297 IMPACTQ9P2X3 320 aa17.22■□□□□ 0.35
CLPTM1-202ENST00000541297 SMC2O95347 1197 aa17.21■□□□□ 0.35
CLPTM1-202ENST00000541297 DCAF15Q66K64 600 aa17.21■□□□□ 0.35
CLPTM1-202ENST00000541297 ARL6IP4Q66PJ3 421 aaKnown RBP17.21■□□□□ 0.35
CLPTM1-202ENST00000541297 TMC6Q7Z403 805 aa17.21■□□□□ 0.35
CLPTM1-202ENST00000541297 IFNKQ9P0W0 207 aa17.21■□□□□ 0.35
CLPTM1-202ENST00000541297 TDP2O95551 362 aa17.21■□□□□ 0.35
CLPTM1-202ENST00000541297 ZRSR1Q15695 479 aaKnown RBP17.21■□□□□ 0.35
CLPTM1-202ENST00000541297 DTHD1Q6ZMT9 781 aa17.21■□□□□ 0.35
CLPTM1-202ENST00000541297 POTEDQ86YR6 584 aa17.21■□□□□ 0.35
CLPTM1-202ENST00000541297 L2HGDHQ9H9P8 463 aa17.21■□□□□ 0.35
CLPTM1-202ENST00000541297 PP2D1A8MPX8 630 aa17.2■□□□□ 0.34
CLPTM1-202ENST00000541297 EDIL3O43854 480 aa17.2■□□□□ 0.34
CLPTM1-202ENST00000541297 ACTN4O43707 911 aaKnown RBP17.2■□□□□ 0.34
CLPTM1-202ENST00000541297 MTMR2Q13614 643 aa17.2■□□□□ 0.34
CLPTM1-202ENST00000541297 PRR29P0C7W0 189 aa17.2■□□□□ 0.34
CLPTM1-202ENST00000541297 CHURC1Q8WUH1 139 aa17.2■□□□□ 0.34
CLPTM1-202ENST00000541297 ADARB2Q9NS39 739 aaKnown RBP17.2■□□□□ 0.34
CLPTM1-202ENST00000541297 ERICH4A6NGS2 130 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms