RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 ZNF543Q08ER8 600 aa20.3■□□□□ 0.84
PDCD2-207ENST00000539212 PPIGQ13427 754 aaKnown RBP eCLIP20.3■□□□□ 0.84
PDCD2-207ENST00000539212 ITGA7Q13683 1181 aa20.3■□□□□ 0.84
PDCD2-207ENST00000539212 MFSD6Q6ZSS7 791 aa20.3■□□□□ 0.84
PDCD2-207ENST00000539212 KIAA1211Q6ZU35 1233 aa20.3■□□□□ 0.84
PDCD2-207ENST00000539212 SLC43A3Q8NBI5 491 aa20.3■□□□□ 0.84
PDCD2-207ENST00000539212 MORC4Q8TE76 937 aa20.3■□□□□ 0.84
PDCD2-207ENST00000539212 VTA1Q9NP79 307 aa20.3■□□□□ 0.84
PDCD2-207ENST00000539212 GRIN2CQ14957 1233 aa20.29■□□□□ 0.84
PDCD2-207ENST00000539212 IQSEC1Q6DN90 963 aa20.29■□□□□ 0.84
PDCD2-207ENST00000539212 ZNF365Q70YC5 407 aa20.29■□□□□ 0.84
PDCD2-207ENST00000539212 CHD1LQ86WJ1 897 aa20.29■□□□□ 0.84
PDCD2-207ENST00000539212 PPP1R13LQ8WUF5 828 aa20.29■□□□□ 0.84
PDCD2-207ENST00000539212 TRPV6Q9H1D0 765 aa20.29■□□□□ 0.84
PDCD2-207ENST00000539212 CHD9Q3L8U1 2897 aa20.29■□□□□ 0.84
PDCD2-207ENST00000539212 CUL9Q8IWT3 2517 aa20.29■□□□□ 0.84
PDCD2-207ENST00000539212 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.28■□□□□ 0.84
PDCD2-207ENST00000539212 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.28■□□□□ 0.84
PDCD2-207ENST00000539212 B4GALT4O60513 344 aa20.28■□□□□ 0.84
PDCD2-207ENST00000539212 SNHG28P0DPA3 235 aa20.28■□□□□ 0.84
PDCD2-207ENST00000539212 CWC27Q6UX04 472 aaKnown RBP20.28■□□□□ 0.84
PDCD2-207ENST00000539212 TMEM199Q8N511 208 aa20.28■□□□□ 0.84
PDCD2-207ENST00000539212 EXOC6Q8TAG9 804 aa20.28■□□□□ 0.84
PDCD2-207ENST00000539212 TANC1Q9C0D5 1861 aa20.28■□□□□ 0.84
PDCD2-207ENST00000539212 KIAA1217Q5T5P2 1943 aa20.27■□□□□ 0.84
PDCD2-207ENST00000539212 SCN10AQ9Y5Y9 1956 aa20.27■□□□□ 0.84
PDCD2-207ENST00000539212 CCL23P55773 120 aa20.27■□□□□ 0.84
PDCD2-207ENST00000539212 USH1GQ495M9 461 aa20.27■□□□□ 0.84
PDCD2-207ENST00000539212 RASIP1Q5U651 963 aa20.27■□□□□ 0.84
PDCD2-207ENST00000539212 RNF207Q6ZRF8 634 aa20.27■□□□□ 0.84
PDCD2-207ENST00000539212 UBA5Q9GZZ9 404 aa20.27■□□□□ 0.84
PDCD2-207ENST00000539212 HIPK3Q9H422 1215 aa20.27■□□□□ 0.84
PDCD2-207ENST00000539212 RWDD1Q9H446 243 aaPredicted RBP20.27■□□□□ 0.84
PDCD2-207ENST00000539212 ADD3Q9UEY8 706 aaKnown RBP20.27■□□□□ 0.84
PDCD2-207ENST00000539212 CABYRO75952 493 aa20.26■□□□□ 0.83
PDCD2-207ENST00000539212 RPS6P62753 249 aaKnown RBP20.26■□□□□ 0.83
PDCD2-207ENST00000539212 NUCB1Q02818 461 aa20.26■□□□□ 0.83
PDCD2-207ENST00000539212 MAPK8IP2Q13387 824 aaPredicted RBP20.26■□□□□ 0.83
PDCD2-207ENST00000539212 DUSP28Q4G0W2 176 aa20.26■□□□□ 0.83
PDCD2-207ENST00000539212 TIFAQ96CG3 184 aa20.26■□□□□ 0.83
PDCD2-207ENST00000539212 PBX4Q9BYU1 374 aa20.26■□□□□ 0.83
PDCD2-207ENST00000539212 WDR11Q9BZH6 1224 aa20.26■□□□□ 0.83
PDCD2-207ENST00000539212 WNT8AQ9H1J5 351 aa20.26■□□□□ 0.83
PDCD2-207ENST00000539212 CXXC1Q9P0U4 656 aaPredicted RBP20.26■□□□□ 0.83
PDCD2-207ENST00000539212 TMEM265A0A087WTH1 108 aa20.25■□□□□ 0.83
PDCD2-207ENST00000539212 ZNF213O14771 459 aa20.25■□□□□ 0.83
PDCD2-207ENST00000539212 ZEB2O60315 1214 aa20.25■□□□□ 0.83
PDCD2-207ENST00000539212 KDM4AO75164 1064 aa20.25■□□□□ 0.83
PDCD2-207ENST00000539212 PSRC1Q6PGN9 363 aaPredicted RBP20.25■□□□□ 0.83
PDCD2-207ENST00000539212 TICAM2Q86XR7 235 aa20.25■□□□□ 0.83
PDCD2-207ENST00000539212 USP38Q8NB14 1042 aa20.25■□□□□ 0.83
PDCD2-207ENST00000539212 ESR2Q92731 530 aa20.25■□□□□ 0.83
PDCD2-207ENST00000539212 COPS5Q92905 334 aa20.25■□□□□ 0.83
PDCD2-207ENST00000539212 TTC14Q96N46 770 aa20.25■□□□□ 0.83
PDCD2-207ENST00000539212 NOC4LQ9BVI4 516 aaKnown RBP20.25■□□□□ 0.83
PDCD2-207ENST00000539212 IL25Q9H293 177 aa20.25■□□□□ 0.83
PDCD2-207ENST00000539212 OSBPL3Q9H4L5 887 aa20.25■□□□□ 0.83
PDCD2-207ENST00000539212 RNF41Q9H4P4 317 aaPredicted RBP20.25■□□□□ 0.83
PDCD2-207ENST00000539212 IL23AQ9NPF7 189 aa20.25■□□□□ 0.83
PDCD2-207ENST00000539212 DIAPH3Q9NSV4 1193 aa20.25■□□□□ 0.83
PDCD2-207ENST00000539212 Q9Y3F1 56 aa20.25■□□□□ 0.83
PDCD2-207ENST00000539212 WDR19Q8NEZ3 1342 aa20.25■□□□□ 0.83
PDCD2-207ENST00000539212 RBM47A0AV96 593 aaKnown RBP20.24■□□□□ 0.83
PDCD2-207ENST00000539212 B4E1Z4 1266 aa20.24■□□□□ 0.83
PDCD2-207ENST00000539212 MYL3P08590 195 aa20.24■□□□□ 0.83
PDCD2-207ENST00000539212 PCP11498 1178 aaKnown RBP20.24■□□□□ 0.83
PDCD2-207ENST00000539212 OR6J1Q8NGC5 347 aa20.24■□□□□ 0.83
PDCD2-207ENST00000539212 SCLYQ96I15 445 aa20.24■□□□□ 0.83
PDCD2-207ENST00000539212 ZNF576Q9H609 170 aa20.24■□□□□ 0.83
PDCD2-207ENST00000539212 TRMT13Q9NUP7 481 aaKnown RBP20.24■□□□□ 0.83
PDCD2-207ENST00000539212 CHD7Q9P2D1 2997 aa20.24■□□□□ 0.83
PDCD2-207ENST00000539212 MFAP1P55081 439 aaKnown RBP20.23■□□□□ 0.83
PDCD2-207ENST00000539212 PURAQ00577 322 aaKnown RBP20.23■□□□□ 0.83
PDCD2-207ENST00000539212 PDE4DQ08499 809 aa20.23■□□□□ 0.83
PDCD2-207ENST00000539212 OTOP2Q7RTS6 562 aa20.23■□□□□ 0.83
PDCD2-207ENST00000539212 PNMA1Q8ND90 353 aa20.23■□□□□ 0.83
PDCD2-207ENST00000539212 TBC1D5Q92609 795 aa20.23■□□□□ 0.83
PDCD2-207ENST00000539212 ALDH8A1Q9H2A2 487 aaPredicted RBP20.23■□□□□ 0.83
PDCD2-207ENST00000539212 REV3LO60673 3130 aa20.22■□□□□ 0.83
PDCD2-207ENST00000539212 ARIH2O95376 493 aa20.22■□□□□ 0.83
PDCD2-207ENST00000539212 CYP2C9P11712 490 aa20.22■□□□□ 0.83
PDCD2-207ENST00000539212 EDNRBP24530 442 aa20.22■□□□□ 0.83
PDCD2-207ENST00000539212 CDC37Q16543 378 aaPredicted RBP20.22■□□□□ 0.83
PDCD2-207ENST00000539212 VWCEQ96DN2 955 aa20.22■□□□□ 0.83
PDCD2-207ENST00000539212 MYH7BA7E2Y1 1941 aa20.21■□□□□ 0.83
PDCD2-207ENST00000539212 PPP2R5BQ15173 497 aa20.21■□□□□ 0.83
PDCD2-207ENST00000539212 GPATCH4Q5T3I0 446 aaKnown RBP20.21■□□□□ 0.83
PDCD2-207ENST00000539212 DGKHQ86XP1 1220 aa20.21■□□□□ 0.83
PDCD2-207ENST00000539212 ENAHQ8N8S7 591 aaPredicted RBP20.21■□□□□ 0.83
PDCD2-207ENST00000539212 HERVK_113Q902F9 699 aa20.21■□□□□ 0.83
PDCD2-207ENST00000539212 COL20A1Q9P218 1284 aa20.21■□□□□ 0.83
PDCD2-207ENST00000539212 PTPRSQ13332 1948 aa20.21■□□□□ 0.83
PDCD2-207ENST00000539212 TRIP12Q14669 1992 aaPredicted RBP20.21■□□□□ 0.83
PDCD2-207ENST00000539212 MYO9BQ13459 2157 aa20.2■□□□□ 0.82
PDCD2-207ENST00000539212 LOC102724159A0A0B4J2E5 919 aa20.2■□□□□ 0.82
PDCD2-207ENST00000539212 RBAK-RBAKDNI3L0D1 243 aa20.2■□□□□ 0.82
PDCD2-207ENST00000539212 FGBP02675 491 aa20.2■□□□□ 0.82
PDCD2-207ENST00000539212 CPT1AP50416 773 aa20.2■□□□□ 0.82
PDCD2-207ENST00000539212 AAMPQ13685 434 aa20.2■□□□□ 0.82
PDCD2-207ENST00000539212 PWP2Q15269 919 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms