RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 TMEM39AQ9NV64 488 aa9.98□□□□□ -0.81
SFSWAP-202ENST00000535202 BRPF3Q9ULD4 1205 aa9.98□□□□□ -0.81
SFSWAP-202ENST00000535202 GNEQ9Y223 722 aaKnown RBP9.98□□□□□ -0.81
SFSWAP-202ENST00000535202 A0A0U1RQG5 324 aaPredicted RBP9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 DCDC2CA8MYV0 355 aa9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 CTAGE5O15320 804 aa9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 DYNC1LI2O43237 492 aaPredicted RBP9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 PARP1P09874 1014 aaKnown RBP9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 RAG1P15918 1043 aa9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 RPS6P62753 249 aaKnown RBP9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 FAAP100Q0VG06 881 aa9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 TRDNQ13061 729 aa9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 ASPRV1Q53RT3 343 aa9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 TMEM63BQ5T3F8 832 aa9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 IQSEC1Q6DN90 963 aa9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 TAPT1Q6NXT6 567 aa9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 KIAA1211Q6ZU35 1233 aa9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 CYB5R4Q7L1T6 521 aa9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 ADGRF4Q8IZF3 695 aa9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 MORC4Q8TE76 937 aa9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 U3KPZ7 1027 aaPredicted RBP9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 ELP1O95163 1332 aa9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 MROH7Q68CQ1 1323 aa9.97□□□□□ -0.81
SFSWAP-202ENST00000535202 RANBP2P49792 3224 aaKnown RBP9.96□□□□□ -0.81
SFSWAP-202ENST00000535202 ARVCFO00192 962 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 KIAA0355O15063 1070 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 ZEB2O60315 1214 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 CYP21A2P08686 494 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 ITGB8P26012 769 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 NKX3-2P78367 333 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 PDE4DQ08499 809 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 SEC23AQ15436 765 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 SHHQ15465 462 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 FSCN1Q16658 493 aaKnown RBP9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 C9orf50Q5SZB4 431 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 CXCL17Q6UXB2 119 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 Q7L0L9 218 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 ANKRD33Q7Z3H0 272 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 DEFB123Q8N688 67 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 TOX2Q96NM4 488 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 MPHOSPH6Q99547 160 aaKnown RBP9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 VAT1LQ9HCJ6 419 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 ABCB11O95342 1321 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 DNAH12Q6ZR08 3092 aa9.96□□□□□ -0.82
SFSWAP-202ENST00000535202 LOC102724159A0A0B4J2E5 919 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 ERICH2A1L162 156 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 SGSM2O43147 1006 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 CDK7P50613 346 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 FPGSQ05932 587 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 PWP2Q15269 919 aaKnown RBP9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 QRICH1Q2TAL8 776 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 DUSP28Q4G0W2 176 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 GPR153Q6NV75 609 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 RALYLQ86SE5 291 aaKnown RBP9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 FBXO11Q86XK2 927 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 STAG2Q8N3U4 1231 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 DNERQ8NFT8 737 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 OR6J1Q8NGC5 347 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 NCOA7Q8NI08 942 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 BACH2Q9BYV9 841 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 WDR11Q9BZH6 1224 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 JMJD4Q9H9V9 463 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 Q9Y3F1 56 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 TAF6LQ9Y6J9 622 aa9.95□□□□□ -0.82
SFSWAP-202ENST00000535202 B4DLN1 442 aa9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 E7EWF7 191 aa9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 IFIT3O14879 490 aaKnown RBP9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 TLR3O15455 904 aaKnown RBP9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 CABYRO75952 493 aa9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 TIMP1P01033 207 aa9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 MRPL12P52815 198 aaKnown RBP9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 EPHB4P54760 987 aa9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 WTAPQ15007 396 aa9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 PPP2R5BQ15173 497 aa9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 STOX1Q6ZVD7 989 aa9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 CHST3Q7LGC8 479 aa9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 MCF2L2Q86YR7 1114 aa9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 FAM126BQ8IXS8 530 aa9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 RGS22Q8NE09 1264 aa9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 TBC1D5Q92609 795 aa9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 RNPC3Q96LT9 517 aaKnown RBP9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 PPP1R12CQ9BZL4 782 aa9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 TBX21Q9UL17 535 aa9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 MRPL11Q9Y3B7 192 aaKnown RBP9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 SZT2Q5T011 3432 aa9.94□□□□□ -0.82
SFSWAP-202ENST00000535202 RBM47A0AV96 593 aaKnown RBP9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 KLRF2D3W0D1 207 aa9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 MYL3P08590 195 aa9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 EDNRBP24530 442 aa9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 CPT1AP50416 773 aa9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 PSMC6P62333 389 aa9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 ITGA7Q13683 1181 aa9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 GRM4Q14833 912 aa9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 SART3Q15020 963 aaKnown RBP9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 HOMER1Q86YM7 354 aa9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 SYTL5Q8TDW5 730 aaPredicted RBP9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 SCFD2Q8WU76 684 aa9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 COPS5Q92905 334 aa9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 MAP4K1Q92918 833 aa9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 TAAR1Q96RJ0 339 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms