RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 CYB5R4Q7L1T6 521 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 FAM133AQ8N9E0 248 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 TCEANC2Q96MN5 208 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 GLT1D1Q96MS3 346 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.98□□□□□ -0.65
VPS26B-207ENST00000532160 ACAD9Q9H845 621 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 A1CFQ9NQ94 594 aaKnown RBP10.98□□□□□ -0.65
VPS26B-207ENST00000532160 FBXO40Q9UH90 709 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 ASTN1O14525 1302 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 ELP1O95163 1332 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 TMEM265A0A087WTH1 108 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 A0A0U1RQG5 324 aaPredicted RBP10.97□□□□□ -0.65
VPS26B-207ENST00000532160 SOWAHBA6NEL2 793 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 ARVCFO00192 962 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 MCCP23508 829 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 SLC1A4P43007 532 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 TRDNQ13061 729 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 IKQ13123 557 aaPredicted RBP10.97□□□□□ -0.65
VPS26B-207ENST00000532160 GRIN2CQ14957 1233 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 GNASQ5JWF2 1037 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 TMEM240Q5SV17 173 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 MFSD5Q6N075 450 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 KCTD1Q719H9 257 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 C16orf59Q7L2K0 433 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 RALYLQ86SE5 291 aaKnown RBP10.97□□□□□ -0.65
VPS26B-207ENST00000532160 FAM126BQ8IXS8 530 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 PCSK9Q8NBP7 692 aaKnown RBP10.97□□□□□ -0.65
VPS26B-207ENST00000532160 NCOA7Q8NI08 942 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 ESR2Q92731 530 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 KCNB2Q92953 911 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 VTI1AQ96AJ9 217 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 GMCL1Q96IK5 515 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 JAKMIP1Q96N16 626 aaKnown RBP10.97□□□□□ -0.65
VPS26B-207ENST00000532160 LRRC2Q9BYS8 371 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 SPC25Q9HBM1 224 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 IL17RBQ9NRM6 502 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 RNF146Q9NTX7 359 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 ZSWIM5Q9P217 1185 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 MROH7Q68CQ1 1323 aa10.97□□□□□ -0.65
VPS26B-207ENST00000532160 GRXCR1A8MXD5 290 aa10.96□□□□□ -0.65
VPS26B-207ENST00000532160 EPB41L2O43491 1005 aaKnown RBP10.96□□□□□ -0.65
VPS26B-207ENST00000532160 ACRP10323 421 aa10.96□□□□□ -0.65
VPS26B-207ENST00000532160 CSF2RAP15509 400 aa10.96□□□□□ -0.65
VPS26B-207ENST00000532160 PBX2P40425 430 aa10.96□□□□□ -0.65
VPS26B-207ENST00000532160 FXR2P51116 673 aaKnown RBP eCLIP10.96□□□□□ -0.65
VPS26B-207ENST00000532160 ANTXR2P58335 489 aa10.96□□□□□ -0.65
VPS26B-207ENST00000532160 MUM1L1Q5H9M0 696 aa10.96□□□□□ -0.65
VPS26B-207ENST00000532160 CCDC174Q6PII3 467 aa10.96□□□□□ -0.65
VPS26B-207ENST00000532160 FAM160B2Q86V87 743 aa10.96□□□□□ -0.65
VPS26B-207ENST00000532160 MB21D2Q8IYB1 491 aaPredicted RBP10.96□□□□□ -0.65
VPS26B-207ENST00000532160 USP38Q8NB14 1042 aa10.96□□□□□ -0.65
VPS26B-207ENST00000532160 TRERF1Q96PN7 1200 aa10.96□□□□□ -0.65
VPS26B-207ENST00000532160 NEK1Q96PY6 1258 aa10.96□□□□□ -0.65
VPS26B-207ENST00000532160 C22orf23Q9BZE7 217 aa10.96□□□□□ -0.65
VPS26B-207ENST00000532160 PPP1R12CQ9BZL4 782 aa10.96□□□□□ -0.65
VPS26B-207ENST00000532160 KRT23Q9C075 422 aa10.96□□□□□ -0.65
VPS26B-207ENST00000532160 GPHNQ9NQX3 736 aaPredicted RBP10.96□□□□□ -0.65
VPS26B-207ENST00000532160 STX8Q9UNK0 236 aa10.96□□□□□ -0.65
VPS26B-207ENST00000532160 GNEQ9Y223 722 aaKnown RBP10.96□□□□□ -0.65
VPS26B-207ENST00000532160 GBF1Q92538 1859 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.95□□□□□ -0.66
VPS26B-207ENST00000532160 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.95□□□□□ -0.66
VPS26B-207ENST00000532160 CD4P01730 458 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 FDX1P10109 184 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 PCP11498 1178 aaKnown RBP10.95□□□□□ -0.66
VPS26B-207ENST00000532160 ALAS1P13196 640 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 NKX3-2P78367 333 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 TNFAIP2Q03169 654 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 PPIGQ13427 754 aaKnown RBP eCLIP10.95□□□□□ -0.66
VPS26B-207ENST00000532160 TSGA10IPQ3SY00 556 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 TMEM63BQ5T3F8 832 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 RASIP1Q5U651 963 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 CXCL17Q6UXB2 119 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 NOL8Q76FK4 1167 aaKnown RBP10.95□□□□□ -0.66
VPS26B-207ENST00000532160 TLK2Q86UE8 772 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 FBXO16Q8IX29 292 aaPredicted RBP10.95□□□□□ -0.66
VPS26B-207ENST00000532160 CHURC1Q8WUH1 139 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 TIFAQ96CG3 184 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 PURBQ96QR8 312 aaKnown RBP10.95□□□□□ -0.66
VPS26B-207ENST00000532160 UPF3BQ9BZI7 483 aaKnown RBP10.95□□□□□ -0.66
VPS26B-207ENST00000532160 ZNF576Q9H609 170 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 CNNM2Q9H8M5 875 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 SENP2Q9HC62 589 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 PDGFCQ9NRA1 345 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 PRR12Q9ULL5 1215 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 MTMR7Q9Y216 660 aa10.95□□□□□ -0.66
VPS26B-207ENST00000532160 REV3LO60673 3130 aa10.94□□□□□ -0.66
VPS26B-207ENST00000532160 NCOR1O75376 2440 aa10.94□□□□□ -0.66
VPS26B-207ENST00000532160 GRIN2DO15399 1336 aa10.94□□□□□ -0.66
VPS26B-207ENST00000532160 TNKSO95271 1327 aa10.94□□□□□ -0.66
VPS26B-207ENST00000532160 UMODL1Q5DID0 1318 aa10.94□□□□□ -0.66
VPS26B-207ENST00000532160 ASB14A6NK59 587 aa10.94□□□□□ -0.66
VPS26B-207ENST00000532160 PRC1O43663 620 aa10.94□□□□□ -0.66
VPS26B-207ENST00000532160 PLA2G6O60733 806 aa10.94□□□□□ -0.66
VPS26B-207ENST00000532160 SMPD1P17405 629 aa10.94□□□□□ -0.66
VPS26B-207ENST00000532160 CASTP20810 708 aaKnown RBP10.94□□□□□ -0.66
VPS26B-207ENST00000532160 CYP2C18P33260 490 aa10.94□□□□□ -0.66
VPS26B-207ENST00000532160 KRT32Q14532 448 aa10.94□□□□□ -0.66
VPS26B-207ENST00000532160 FSCN1Q16658 493 aaKnown RBP10.94□□□□□ -0.66
VPS26B-207ENST00000532160 TKFCQ3LXA3 575 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms