RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 ANKRD35Q8N283 1001 aa22.3■■□□□ 1.16
PKP3-204ENST00000526971 HOMER2Q9NSB8 354 aa22.3■■□□□ 1.16
PKP3-204ENST00000526971 IFIT3O14879 490 aaKnown RBP22.29■■□□□ 1.16
PKP3-204ENST00000526971 GJA9P57773 515 aa22.29■■□□□ 1.16
PKP3-204ENST00000526971 SNAP25P60880 206 aa22.29■■□□□ 1.16
PKP3-204ENST00000526971 CNTN2Q02246 1040 aa22.29■■□□□ 1.16
PKP3-204ENST00000526971 GPATCH4Q5T3I0 446 aaKnown RBP22.29■■□□□ 1.16
PKP3-204ENST00000526971 C16orf59Q7L2K0 433 aa22.29■■□□□ 1.16
PKP3-204ENST00000526971 CCDC144CPQ8IYA2 1237 aa22.29■■□□□ 1.16
PKP3-204ENST00000526971 USP38Q8NB14 1042 aa22.29■■□□□ 1.16
PKP3-204ENST00000526971 CHST13Q8NET6 341 aa22.29■■□□□ 1.16
PKP3-204ENST00000526971 ABHD16BQ9H3Z7 469 aa22.29■■□□□ 1.16
PKP3-204ENST00000526971 ZNF536O15090 1300 aa22.29■■□□□ 1.16
PKP3-204ENST00000526971 ELP1O95163 1332 aa22.29■■□□□ 1.16
PKP3-204ENST00000526971 ERICH2A1L162 156 aa22.28■■□□□ 1.16
PKP3-204ENST00000526971 ANTXR2P58335 489 aa22.28■■□□□ 1.16
PKP3-204ENST00000526971 RNF20Q5VTR2 975 aa22.28■■□□□ 1.16
PKP3-204ENST00000526971 CHST3Q7LGC8 479 aa22.28■■□□□ 1.16
PKP3-204ENST00000526971 AGBL1Q96MI9 1066 aa22.28■■□□□ 1.16
PKP3-204ENST00000526971 GLT1D1Q96MS3 346 aa22.28■■□□□ 1.16
PKP3-204ENST00000526971 RANBP17Q9H2T7 1088 aaKnown RBP22.28■■□□□ 1.16
PKP3-204ENST00000526971 DDX49Q9Y6V7 483 aaKnown RBP22.28■■□□□ 1.16
PKP3-204ENST00000526971 ASTN1O14525 1302 aa22.28■■□□□ 1.16
PKP3-204ENST00000526971 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.27■■□□□ 1.16
PKP3-204ENST00000526971 GOLGA8HP0CJ92 632 aa22.27■■□□□ 1.16
PKP3-204ENST00000526971 PTGS1P23219 599 aa22.27■■□□□ 1.16
PKP3-204ENST00000526971 SART3Q15020 963 aaKnown RBP22.27■■□□□ 1.16
PKP3-204ENST00000526971 MFSD5Q6N075 450 aa22.27■■□□□ 1.16
PKP3-204ENST00000526971 CCDC174Q6PII3 467 aa22.27■■□□□ 1.16
PKP3-204ENST00000526971 FAM126BQ8IXS8 530 aa22.27■■□□□ 1.16
PKP3-204ENST00000526971 FAM133AQ8N9E0 248 aa22.27■■□□□ 1.16
PKP3-204ENST00000526971 FBXO40Q9UH90 709 aa22.27■■□□□ 1.16
PKP3-204ENST00000526971 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.26■■□□□ 1.15
PKP3-204ENST00000526971 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.26■■□□□ 1.15
PKP3-204ENST00000526971 BEX3Q00994 111 aa22.26■■□□□ 1.15
PKP3-204ENST00000526971 WTAPQ15007 396 aa22.26■■□□□ 1.15
PKP3-204ENST00000526971 TKFCQ3LXA3 575 aa22.26■■□□□ 1.15
PKP3-204ENST00000526971 ASPRV1Q53RT3 343 aa22.26■■□□□ 1.15
PKP3-204ENST00000526971 TMEM67Q5HYA8 995 aa22.26■■□□□ 1.15
PKP3-204ENST00000526971 TMEM240Q5SV17 173 aa22.26■■□□□ 1.15
PKP3-204ENST00000526971 PCSK9Q8NBP7 692 aaKnown RBP22.26■■□□□ 1.15
PKP3-204ENST00000526971 IGDCC4Q8TDY8 1250 aa22.26■■□□□ 1.15
PKP3-204ENST00000526971 A1CFQ9NQ94 594 aaKnown RBP22.26■■□□□ 1.15
PKP3-204ENST00000526971 MROH7Q68CQ1 1323 aa22.26■■□□□ 1.15
PKP3-204ENST00000526971 MUC3AQ02505 3323 aa22.26■■□□□ 1.15
PKP3-204ENST00000526971 A0A0U1RQG5 324 aaPredicted RBP22.25■■□□□ 1.15
PKP3-204ENST00000526971 SOWAHBA6NEL2 793 aa22.25■■□□□ 1.15
PKP3-204ENST00000526971 GRXCR1A8MXD5 290 aa22.25■■□□□ 1.15
PKP3-204ENST00000526971 ARVCFO00192 962 aa22.25■■□□□ 1.15
PKP3-204ENST00000526971 ICAM1P05362 532 aa22.25■■□□□ 1.15
PKP3-204ENST00000526971 PARP1P09874 1014 aaKnown RBP22.25■■□□□ 1.15
PKP3-204ENST00000526971 CSF2RAP15509 400 aa22.25■■□□□ 1.15
PKP3-204ENST00000526971 PBX2P40425 430 aa22.25■■□□□ 1.15
PKP3-204ENST00000526971 GNASQ5JWF2 1037 aa22.25■■□□□ 1.15
PKP3-204ENST00000526971 RASIP1Q5U651 963 aa22.25■■□□□ 1.15
PKP3-204ENST00000526971 MTA3Q9BTC8 594 aa22.25■■□□□ 1.15
PKP3-204ENST00000526971 PPP1R12CQ9BZL4 782 aa22.25■■□□□ 1.15
PKP3-204ENST00000526971 UBA5Q9GZZ9 404 aa22.25■■□□□ 1.15
PKP3-204ENST00000526971 ACAD9Q9H845 621 aa22.25■■□□□ 1.15
PKP3-204ENST00000526971 SENP2Q9HC62 589 aa22.25■■□□□ 1.15
PKP3-204ENST00000526971 RNF146Q9NTX7 359 aa22.25■■□□□ 1.15
PKP3-204ENST00000526971 CHD7Q9P2D1 2997 aa22.25■■□□□ 1.15
PKP3-204ENST00000526971 PRC1O43663 620 aa22.24■■□□□ 1.15
PKP3-204ENST00000526971 ACRP10323 421 aa22.24■■□□□ 1.15
PKP3-204ENST00000526971 MCM5P33992 734 aa22.24■■□□□ 1.15
PKP3-204ENST00000526971 NKX3-2P78367 333 aa22.24■■□□□ 1.15
PKP3-204ENST00000526971 TSGA10IPQ3SY00 556 aa22.24■■□□□ 1.15
PKP3-204ENST00000526971 TIFAQ96CG3 184 aa22.24■■□□□ 1.15
PKP3-204ENST00000526971 TRERF1Q96PN7 1200 aa22.24■■□□□ 1.15
PKP3-204ENST00000526971 ZNF576Q9H609 170 aa22.24■■□□□ 1.15
PKP3-204ENST00000526971 CCPG1Q9ULG6 757 aa22.24■■□□□ 1.15
PKP3-204ENST00000526971 REC8O95072 547 aa22.23■■□□□ 1.15
PKP3-204ENST00000526971 ALAS1P13196 640 aa22.23■■□□□ 1.15
PKP3-204ENST00000526971 PPIGQ13427 754 aaKnown RBP eCLIP22.23■■□□□ 1.15
PKP3-204ENST00000526971 RASEFQ8IZ41 740 aa22.23■■□□□ 1.15
PKP3-204ENST00000526971 VTI1AQ96AJ9 217 aa22.23■■□□□ 1.15
PKP3-204ENST00000526971 PBX4Q9BYU1 374 aa22.23■■□□□ 1.15
PKP3-204ENST00000526971 CPVLQ9H3G5 476 aa22.23■■□□□ 1.15
PKP3-204ENST00000526971 SPC25Q9HBM1 224 aa22.23■■□□□ 1.15
PKP3-204ENST00000526971 GNEQ9Y223 722 aaKnown RBP22.23■■□□□ 1.15
PKP3-204ENST00000526971 CD4P01730 458 aa22.22■■□□□ 1.15
PKP3-204ENST00000526971 COL9A3Q14050 684 aaPredicted RBP22.22■■□□□ 1.15
PKP3-204ENST00000526971 TMEM87BQ96K49 555 aa22.22■■□□□ 1.15
PKP3-204ENST00000526971 LY9Q9HBG7 655 aa22.22■■□□□ 1.15
PKP3-204ENST00000526971 PNMA2Q9UL42 364 aa22.22■■□□□ 1.15
PKP3-204ENST00000526971 CYP2C18P33260 490 aa22.21■■□□□ 1.15
PKP3-204ENST00000526971 TNFAIP2Q03169 654 aa22.21■■□□□ 1.15
PKP3-204ENST00000526971 MUM1L1Q5H9M0 696 aa22.21■■□□□ 1.15
PKP3-204ENST00000526971 TMEM63BQ5T3F8 832 aa22.21■■□□□ 1.15
PKP3-204ENST00000526971 CXCL17Q6UXB2 119 aa22.21■■□□□ 1.15
PKP3-204ENST00000526971 ZNF365Q70YC5 407 aa22.21■■□□□ 1.15
PKP3-204ENST00000526971 ADGRF4Q8IZF3 695 aa22.21■■□□□ 1.15
PKP3-204ENST00000526971 STAG2Q8N3U4 1231 aa22.21■■□□□ 1.15
PKP3-204ENST00000526971 KCNB2Q92953 911 aa22.21■■□□□ 1.15
PKP3-204ENST00000526971 NEK1Q96PY6 1258 aa22.21■■□□□ 1.15
PKP3-204ENST00000526971 PRDM6Q9NQX0 595 aa22.21■■□□□ 1.15
PKP3-204ENST00000526971 GPHNQ9NQX3 736 aaPredicted RBP22.21■■□□□ 1.15
PKP3-204ENST00000526971 MAD2L2Q9UI95 211 aa22.21■■□□□ 1.15
PKP3-204ENST00000526971 GRIN2DO15399 1336 aa22.21■■□□□ 1.15
PKP3-204ENST00000526971 UMODL1Q5DID0 1318 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms