RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 CCND3P30281 292 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 RPS6P62753 249 aaKnown RBP6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 CNTN2Q02246 1040 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 MLLT1Q03111 559 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 C8orf34Q49A92 452 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 ARHGEF16Q5VV41 709 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 PPP1R18Q6NYC8 613 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 MAMDC4Q6UXC1 1216 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 NOL8Q76FK4 1167 aaKnown RBP6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 ARMCX2Q7L311 632 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 CCDC82Q8N4S0 544 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 SRBD1Q8N5C6 995 aaKnown RBP6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 ANKLE1Q8NAG6 615 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 ARRDC4Q8NCT1 418 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 SMARCC2Q8TAQ2 1214 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 NSUN6Q8TEA1 469 aaKnown RBP6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 CCDC12Q8WUD4 166 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 CLEC4DQ8WXI8 215 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 MTMR8Q96EF0 704 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 HTATIP2Q9BUP3 242 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 VTA1Q9NP79 307 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 BRPF3Q9ULD4 1205 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 FAM184BQ9ULE4 1060 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 CNTNAP5Q8WYK1 1306 aa6.23□□□□□ -1.41
HMGB1P40-201ENST00000525121 NID2Q14112 1375 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 SOWAHBA6NEL2 793 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 SPDYE3A6NKU9 549 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 CYTH3O43739 400 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 EN2P19622 333 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 ALDH5A1P51649 535 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 NEK4P51957 841 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 NAPAP54920 295 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 CCT2P78371 535 aaKnown RBP6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 ACVR2BQ13705 512 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 COL9A3Q14050 684 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 PRAMEF19Q5SWL8 479 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 NECAB2Q7Z6G3 386 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 RNF180Q86T96 592 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 TEX2Q8IWB9 1127 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 CMTR1Q8N1G2 835 aaKnown RBP6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 IL27Q8NEV9 243 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 CCDC148Q8NFR7 591 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 SYTL5Q8TDW5 730 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 ZNF274Q96GC6 653 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 IWS1Q96ST2 819 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 RMDN3Q96TC7 470 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 AGXT2Q9BYV1 514 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 C22orf23Q9BZE7 217 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 CRISPLD2Q9H0B8 497 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 AP5M1Q9H0R1 490 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 GLT8D2Q9H1C3 349 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 SLKQ9H2G2 1235 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 PSTPIP2Q9H939 334 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 XPNPEP3Q9NQH7 507 aa6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 V9GY48 417 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 COL11A1P12107 1806 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P40-201ENST00000525121 DNM1LO00429 736 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 ST18O60284 1047 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 ZEB2O60315 1214 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 PPP1R11O60927 126 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 SEC24BO95487 1268 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 SCG2P13521 617 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 XBP1P17861 261 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 EIF2AK2P19525 551 aaKnown RBP6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 PDIA3P30101 505 aaKnown RBP6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 CDC27P30260 824 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 CCND2P30279 289 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 HOXA13P31271 388 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 ADD1P35611 737 aaKnown RBP6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 RGS19P49795 217 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 HSD17B4P51659 736 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 ADCY7P51828 1080 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 EVCP57679 992 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 TNFAIP2Q03169 654 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 SSRP1Q08945 709 aaKnown RBP6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 STK3Q13188 491 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 TOB2Q14106 344 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 STXBP2Q15833 593 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 CCDC144BQ3MJ40 725 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 GNPTABQ3T906 1256 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 BRDTQ58F21 947 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 MCTP2Q6DN12 878 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 IQSEC1Q6DN90 963 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 EEPD1Q7L9B9 569 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 FCHSD1Q86WN1 690 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 FBXO16Q8IX29 292 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 TRPV1Q8NER1 839 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 BICD2Q8TD16 824 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 SCFD2Q8WU76 684 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 WASF1Q92558 559 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 GPKOWQ92917 476 aaPredicted RBP eCLIP6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 SLC26A6Q9BXS9 759 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 RNF26Q9BY78 433 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 ALDH8A1Q9H2A2 487 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 C11orf49Q9H6J7 331 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 C6orf50Q9HD87 102 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 PXMP2Q9NR77 195 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 OGDHLQ9ULD0 1010 aa6.21□□□□□ -1.42
HMGB1P40-201ENST00000525121 hCG_1642624A0A1W2PR95 340 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms